BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00030987
         (923 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009765599.1| PREDICTED: uncharacterized protein LOC104217...    47   5e-07
ref|XP_016437835.1| PREDICTED: uncharacterized protein LOC107763...    42   2e-06
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    50   5e-06

>ref|XP_009765599.1| PREDICTED: uncharacterized protein LOC104217141 [Nicotiana
           sylvestris]
          Length = 196

 Score = 47.0 bits (110), Expect(3) = 5e-07
 Identities = 27/61 (44%), Positives = 34/61 (55%)
 Frame = -3

Query: 540 QIDGQDIS*TSHFQYSELIIHDDGEIAEDVTRVIKTE*LKWRSASEILSDHKTLIKSKGK 361
           ++D Q I     F+Y   II D+GEI EDV   I+   +KWR AS IL D     + KGK
Sbjct: 31  KLDNQVIPKKGIFKYLGSIIQDNGEIDEDVAHCIEAGWMKWRLASGILCDKNVPPRLKGK 90

Query: 360 F 358
           F
Sbjct: 91  F 91



 Score = 31.2 bits (69), Expect(3) = 5e-07
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = -1

Query: 263 RDKGRNECICNKLDIAPIENKIRESIEIVLTSTTKAYV--PVGRSVRITVNGVR 108
           RDK RNE I +K+ +A +E+K++ES         +  +  P+ +  R+T+ G+R
Sbjct: 134 RDKIRNEAIRDKVGVASVEDKMQESRLRWFGHVKRRSIDAPIRKCERLTMAGLR 187



 Score = 24.3 bits (51), Expect(3) = 5e-07
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 10/31 (32%)
 Frame = -2

Query: 373 VEGEIYRMSIRPTI----------KKHVQKM 311
           ++G+ YRM +RPT+            HVQKM
Sbjct: 87  LKGKFYRMLVRPTMLDGVECWQIKNSHVQKM 117


>ref|XP_016437835.1| PREDICTED: uncharacterized protein LOC107763843 [Nicotiana tabacum]
          Length = 275

 Score = 42.4 bits (98), Expect(3) = 2e-06
 Identities = 24/61 (39%), Positives = 32/61 (52%)
 Frame = -3

Query: 540 QIDGQDIS*TSHFQYSELIIHDDGEIAEDVTRVIKTE*LKWRSASEILSDHKTLIKSKGK 361
           ++D Q I     F+Y   +I  +GEI EDVT  +    +KWR  S IL D     + KGK
Sbjct: 121 KLDTQVIPKRDSFKYLGSVIQGNGEINEDVTHRVGAGWMKWRLLSGILCDRNVSPRLKGK 180

Query: 360 F 358
           F
Sbjct: 181 F 181



 Score = 36.6 bits (83), Expect(3) = 2e-06
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
 Frame = -1

Query: 263 RDKGRNECICNKLDIAPIENKIRES----IEIVLTSTTKAYVPVGRSVRITVNG 114
           +D+ RNE I +K+ +AP+E+K+RES     E V    T   VPV R  R+T+ G
Sbjct: 224 KDRIRNEVIKDKVGVAPVEDKLRESRLRWFEHVKRRDTD--VPVRRCERLTIAG 275



 Score = 21.6 bits (44), Expect(3) = 2e-06
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 10/31 (32%)
 Frame = -2

Query: 373 VEGEIYRMSIR----------PTIKKHVQKM 311
           ++G+ Y+M +R          P  K HVQKM
Sbjct: 177 LKGKFYKMVVRLAMLYKAECWPVKKSHVQKM 207


>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score = 50.1 bits (118), Expect(3) = 5e-06
 Identities = 25/60 (41%), Positives = 36/60 (60%)
 Frame = -3

Query: 537  IDGQDIS*TSHFQYSELIIHDDGEIAEDVTRVIKTE*LKWRSASEILSDHKTLIKSKGKF 358
            +DGQ +     F+Y   ++  +G+I EDV+  IK   LKWR A+ +L DH+   K KGKF
Sbjct: 840  LDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKF 899



 Score = 25.4 bits (54), Expect(3) = 5e-06
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 263  RDKGRNECICNKLDIAPIENKIRE 192
            RD+ RN+ I  ++ +APIE K+ +
Sbjct: 942  RDRVRNDDIRERVGVAPIEEKLMQ 965



 Score = 23.1 bits (48), Expect(3) = 5e-06
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 10/32 (31%)
 Frame = -2

Query: 373 VEGEIYRMSIRPTI----------KKHVQKMS 308
           ++G+ YR +IRP I          ++HVQ++S
Sbjct: 895 LKGKFYRTAIRPAILYGAECWPTKRRHVQQLS 926