BLASTX nr result

ID: Ophiopogon25_contig00030958 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00030958
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272784.1| uncharacterized protein LOC109847964 [Aspara...    88   3e-17
gb|ONK65540.1| uncharacterized protein A4U43_C07F38150 [Asparagu...    85   2e-16

>ref|XP_020272784.1| uncharacterized protein LOC109847964 [Asparagus officinalis]
          Length = 408

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 47/190 (24%)
 Frame = -1

Query: 456 EVGRDELRVQVGGTDASNKGRCSTSGFSHLPVPEAIQEKNQLKPRDEEDHNMVQEPILDN 277
           E+G     V+ GG     +G C +SG +      ++ ++N L+P +E +HNM + P  D 
Sbjct: 60  EMGAGTAEVRNGGNGVFTEGCCLSSGANQQRQSMSVIQENTLEPGNENNHNMAEVPHSDI 119

Query: 276 VTVAAGVPP----------------------------------------------TVETV 235
           VT AAG+P                                               T+ET 
Sbjct: 120 VTEAAGLPSIETGHQLSDGGGCSLSGFGEDHPREEPNSTEPCPCSNVLPAAAEVQTIETA 179

Query: 234 EDSDQDRMEEDQSLMDEGQVPSVDKGAEVTHRKDISS-VTDHNRVQDTVIKPSIADQNPT 58
             S+  R+E  ++++D  Q PS+D G EV   +D++S  ++HN   DTV++P+IADQ+P 
Sbjct: 180 NGSNLQRVETCENVVDREQSPSLDNGGEVAPTRDVNSGGSEHNINHDTVMEPAIADQHPR 239

Query: 57  ELVHGEENQN 28
           E  H +ENQN
Sbjct: 240 ESKHNKENQN 249


>gb|ONK65540.1| uncharacterized protein A4U43_C07F38150 [Asparagus officinalis]
          Length = 352

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 47/182 (25%)
 Frame = -1

Query: 432 VQVGGTDASNKGRCSTSGFSHLPVPEAIQEKNQLKPRDEEDHNMVQEPILDNVTVAAGVP 253
           V+ GG     +G C +SG +      ++ ++N L+P +E +HNM + P  D VT AAG+P
Sbjct: 12  VRNGGNGVFTEGCCLSSGANQQRQSMSVIQENTLEPGNENNHNMAEVPHSDIVTEAAGLP 71

Query: 252 P----------------------------------------------TVETVEDSDQDRM 211
                                                          T+ET   S+  R+
Sbjct: 72  SIETGHQLSDGGGCSLSGFGEDHPREEPNSTEPCPCSNVLPAAAEVQTIETANGSNLQRV 131

Query: 210 EEDQSLMDEGQVPSVDKGAEVTHRKDISS-VTDHNRVQDTVIKPSIADQNPTELVHGEEN 34
           E  ++++D  Q PS+D G EV   +D++S  ++HN   DTV++P+IADQ+P E  H +EN
Sbjct: 132 ETCENVVDREQSPSLDNGGEVAPTRDVNSGGSEHNINHDTVMEPAIADQHPRESKHNKEN 191

Query: 33  QN 28
           QN
Sbjct: 192 QN 193


Top