BLASTX nr result

ID: Ophiopogon25_contig00030828 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00030828
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020247074.1| uncharacterized protein LOC109824837 [Aspara...    54   1e-06

>ref|XP_020247074.1| uncharacterized protein LOC109824837 [Asparagus officinalis]
 gb|ONK57626.1| uncharacterized protein A4U43_C09F2430 [Asparagus officinalis]
          Length = 153

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +2

Query: 2   VSCEWKKTDSKGKSGSVARWS-DQALGMPKGGRSLLAHRRPSLVVML 139
           VSCEWKK + KGKSGS+A +   QA G+PK   SLL  R+PSLVVML
Sbjct: 85  VSCEWKK-NFKGKSGSIAEFRYGQAFGVPKRSSSLLPRRKPSLVVML 130


Top