BLASTX nr result
ID: Ophiopogon25_contig00030782
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00030782
(874 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apos... 106 4e-22
ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containi... 100 6e-20
ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-19
ref|XP_020585876.1| pentatricopeptide repeat-containing protein ... 99 2e-19
ref|XP_020585869.1| pentatricopeptide repeat-containing protein ... 99 2e-19
ref|XP_020585861.1| pentatricopeptide repeat-containing protein ... 99 2e-19
ref|XP_020695322.1| pentatricopeptide repeat-containing protein ... 95 5e-18
ref|XP_020695320.1| pentatricopeptide repeat-containing protein ... 95 5e-18
ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containi... 88 9e-16
gb|KFK23272.1| hypothetical protein AALP_AAs55729U000100 [Arabis... 82 8e-14
ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containi... 82 8e-14
gb|ERN18110.1| hypothetical protein AMTR_s01859p00006880, partia... 73 7e-12
gb|PIA59353.1| hypothetical protein AQUCO_00400323v1 [Aquilegia ... 76 9e-12
gb|POF12316.1| pentatricopeptide repeat-containing protein, chlo... 73 1e-11
ref|XP_006410036.1| pentatricopeptide repeat-containing protein ... 76 1e-11
gb|POE60390.1| pentatricopeptide repeat-containing protein, chlo... 72 3e-11
ref|XP_007206426.1| pentatricopeptide repeat-containing protein ... 74 4e-11
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_017983550.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-11
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p... 74 5e-11
>gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 736
Score = 106 bits (265), Expect = 4e-22
Identities = 53/97 (54%), Positives = 61/97 (62%)
Frame = +3
Query: 495 IATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXX 674
+AT S N P DHP+L LLDDY LD R+KQIHA MLR D+ SHPY
Sbjct: 11 LATNPPSENGYRRLPVDHPILTLLDDYAALDDARVKQIHARMLRYDLFSHPYAASRLLTA 70
Query: 675 XXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHASG 785
P +LPYAL +FDQIP+PNL+SWN IRA ASG
Sbjct: 71 SFFSPSPNLPYALQMFDQIPRPNLYSWNVAIRAQASG 107
>ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Phoenix dactylifera]
Length = 744
Score = 100 bits (249), Expect = 6e-20
Identities = 48/90 (53%), Positives = 58/90 (64%)
Frame = +3
Query: 513 SNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXPF 692
++N R GDHP+L LD YK+LD +L+Q HA MLRL + SHPY P
Sbjct: 25 NDNEDRRRSGDHPVLAFLDGYKSLDAAQLRQTHARMLRLGLFSHPYSASRLLTACSLSPS 84
Query: 693 RHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
L YAL +FDQIP PNL++WNTLIRAHAS
Sbjct: 85 PDLRYALRMFDQIPHPNLYAWNTLIRAHAS 114
>ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Elaeis guineensis]
Length = 741
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/89 (53%), Positives = 57/89 (64%)
Frame = +3
Query: 516 NNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXPFR 695
+N R GDHP+L DDYK+LD +L+QIHA MLRL + SHPY
Sbjct: 23 DNEDRRRSGDHPVLAFFDDYKSLDAAQLRQIHARMLRLGLFSHPYSASRLLTACSLSSSP 82
Query: 696 HLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
L YAL +FDQIP PNL++WNTLIRAHAS
Sbjct: 83 DLHYALRVFDQIPHPNLYTWNTLIRAHAS 111
>ref|XP_020585876.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic isoform X3 [Phalaenopsis equestris]
Length = 682
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/96 (51%), Positives = 59/96 (61%)
Frame = +3
Query: 495 IATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXX 674
+A S N + P DHP+L LD++ TL LK+IHA MLR D+L HPY
Sbjct: 12 VAANPRSQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTS 71
Query: 675 XXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P R+LPYAL LFDQIP PNL+SWN LIR+ AS
Sbjct: 72 FALSPSRNLPYALRLFDQIPHPNLYSWNILIRSLAS 107
>ref|XP_020585869.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic isoform X2 [Phalaenopsis equestris]
Length = 717
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/96 (51%), Positives = 59/96 (61%)
Frame = +3
Query: 495 IATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXX 674
+A S N + P DHP+L LD++ TL LK+IHA MLR D+L HPY
Sbjct: 12 VAANPRSQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTS 71
Query: 675 XXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P R+LPYAL LFDQIP PNL+SWN LIR+ AS
Sbjct: 72 FALSPSRNLPYALRLFDQIPHPNLYSWNILIRSLAS 107
>ref|XP_020585861.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic isoform X1 [Phalaenopsis equestris]
Length = 738
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/96 (51%), Positives = 59/96 (61%)
Frame = +3
Query: 495 IATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXX 674
+A S N + P DHP+L LD++ TL LK+IHA MLR D+L HPY
Sbjct: 12 VAANPRSQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTS 71
Query: 675 XXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P R+LPYAL LFDQIP PNL+SWN LIR+ AS
Sbjct: 72 FALSPSRNLPYALRLFDQIPHPNLYSWNILIRSLAS 107
>ref|XP_020695322.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic isoform X2 [Dendrobium catenatum]
Length = 712
Score = 94.7 bits (234), Expect = 5e-18
Identities = 45/95 (47%), Positives = 57/95 (60%)
Frame = +3
Query: 498 ATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXX 677
A S N P DHP+L LD++ TL +K+IHA MLR+ + HPY
Sbjct: 12 AVTPSSENGRRRLPADHPILSFLDEHTTLSSAEIKKIHARMLRIGLFDHPYAASRLLTSC 71
Query: 678 XXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P R+L YA L+FDQIPQPNL+SWN LIRA++S
Sbjct: 72 SISPSRNLQYAHLVFDQIPQPNLYSWNILIRAYSS 106
>ref|XP_020695320.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic isoform X1 [Dendrobium catenatum]
gb|PKU71494.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 736
Score = 94.7 bits (234), Expect = 5e-18
Identities = 45/95 (47%), Positives = 57/95 (60%)
Frame = +3
Query: 498 ATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXX 677
A S N P DHP+L LD++ TL +K+IHA MLR+ + HPY
Sbjct: 12 AVTPSSENGRRRLPADHPILSFLDEHTTLSSAEIKKIHARMLRIGLFDHPYAASRLLTSC 71
Query: 678 XXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P R+L YA L+FDQIPQPNL+SWN LIRA++S
Sbjct: 72 SISPSRNLQYAHLVFDQIPQPNLYSWNILIRAYSS 106
>ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 749
Score = 88.2 bits (217), Expect = 9e-16
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 513 SNNNTTSRPG-DHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXP 689
SNN R DHP+L LLDD++ LD +++IHA MLRL +L HPY P
Sbjct: 29 SNNLPVRRKAEDHPVLALLDDHRRLDADGIRRIHARMLRLGLLGHPYSASRLLAACSLSP 88
Query: 690 FRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
L YA +FD IP PNLF+WN +IRAHAS
Sbjct: 89 SADLRYARRVFDHIPAPNLFTWNIIIRAHAS 119
>gb|KFK23272.1| hypothetical protein AALP_AAs55729U000100 [Arabis alpina]
Length = 739
Score = 82.4 bits (202), Expect = 8e-14
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +3
Query: 501 TMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXX 680
++ + N+ TT+ + L+D + D+ +LKQIHAHM+R + + PY
Sbjct: 17 SLSNPNHPTTNNERSRHTISLID--RCADLRQLKQIHAHMVRTGLFNDPYSASKLFAIAA 74
Query: 681 XXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHASG 785
PF L YA +FDQIPQPN FSWNTLIRA+ASG
Sbjct: 75 LSPFASLDYACKVFDQIPQPNSFSWNTLIRAYASG 109
>ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Nelumbo nucifera]
Length = 742
Score = 82.4 bits (202), Expect = 8e-14
Identities = 44/89 (49%), Positives = 53/89 (59%)
Frame = +3
Query: 519 NNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXPFRH 698
NN R +H +L L+D K DM +LKQIHA MLR HPY PF
Sbjct: 26 NNDDPRFDNHSVLSLID--KCSDMKQLKQIHAQMLRTGAFFHPYSASRLITMCTLSPFAS 83
Query: 699 LPYALLLFDQIPQPNLFSWNTLIRAHASG 785
L YA +FDQI QPN+++WNTLIRA+ASG
Sbjct: 84 LEYARRVFDQISQPNVYTWNTLIRAYASG 112
>gb|ERN18110.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
trichopoda]
Length = 190
Score = 73.2 bits (178), Expect = 7e-12
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 513 SNNNTTSRP-GDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXP 689
+N+N++S+ DHP L LL+ K + +L QIHAH++RL ++ HPY
Sbjct: 22 NNSNSSSKQFSDHPSLILLERCK--NTKQLPQIHAHLIRLGLIFHPYPLSRLLTISALSN 79
Query: 690 FRH-LPYALLLFDQIPQPNLFSWNTLIRAHAS 782
+ L YAL +F+QIPQPNL+ +NT+IRAHAS
Sbjct: 80 SENALSYALKIFEQIPQPNLYMYNTIIRAHAS 111
>gb|PIA59353.1| hypothetical protein AQUCO_00400323v1 [Aquilegia coerulea]
Length = 730
Score = 76.3 bits (186), Expect = 9e-12
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +3
Query: 483 NKQFIATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXX 662
N + T +N N +HP+L L++ + +LKQIHAHMLR+ + PY
Sbjct: 25 NNKTTTTTNYNNYNNERYFANHPVLSLIEQCS--NTTQLKQIHAHMLRIGLFFDPYSVSK 82
Query: 663 XXXXXXXXPFR-HLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
PF L YA +FDQIPQPNL++WNTLIRA+AS
Sbjct: 83 LITVSSLAPFSTSLDYARKVFDQIPQPNLYTWNTLIRAYAS 123
>gb|POF12316.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
suber]
Length = 188
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/107 (42%), Positives = 59/107 (55%)
Frame = +3
Query: 462 RRSKSNLNKQFIATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILS 641
R SKSN K + + + NN +P+L L++ + +LKQ+HA MLR +
Sbjct: 13 RHSKSN--KPNLYPLSPTVNNDR-----YPILPLINQCNSTK--QLKQVHAQMLRTGLFF 63
Query: 642 HPYXXXXXXXXXXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P+ PF L YA LFDQIPQPNLF+WNTLIRA+AS
Sbjct: 64 DPFSAGKLITASALSPFSSLDYARQLFDQIPQPNLFTWNTLIRAYAS 110
>ref|XP_006410036.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Eutrema salsugineum]
gb|ESQ51489.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
Length = 739
Score = 75.9 bits (185), Expect = 1e-11
Identities = 41/95 (43%), Positives = 53/95 (55%)
Frame = +3
Query: 501 TMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXX 680
T + N TT+ L L+D + D+ +LKQIHA M+R + + Y
Sbjct: 17 TFSNPNQPTTNNERSRHTLSLID--RCADLRQLKQIHAQMVRTGLFNDHYSASKLFAIAA 74
Query: 681 XXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHASG 785
PF L YA +FDQIPQPN F+WNTLIRA+ASG
Sbjct: 75 LSPFASLDYACKVFDQIPQPNSFTWNTLIRAYASG 109
>gb|POE60390.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
suber]
Length = 198
Score = 71.6 bits (174), Expect = 3e-11
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +3
Query: 462 RRSKSNLNKQFIATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILS 641
R SKSN K + + + NN +P+L L++ + +LKQ+HA MLR +
Sbjct: 13 RHSKSN--KPNLYPLSPTVNNDR-----YPILPLINQCNSTK--QLKQVHAQMLRTGLFF 63
Query: 642 HPYXXXXXXXXXXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHAS 782
P+ PF L YA +FDQIPQPNLF+WNTLIRA+AS
Sbjct: 64 DPFSAGKLITASALLPFSSLDYARQVFDQIPQPNLFTWNTLIRAYAS 110
>ref|XP_007206426.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Prunus persica]
gb|ONH99940.1| hypothetical protein PRUPE_6G058800 [Prunus persica]
Length = 738
Score = 74.3 bits (181), Expect = 4e-11
Identities = 39/87 (44%), Positives = 51/87 (58%)
Frame = +3
Query: 522 NTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXPFRHL 701
+T R HP L L+D ++ +LKQ+HA MLR +L PY F L
Sbjct: 23 STDLRFSSHPALSLIDQCTSIK--QLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSL 80
Query: 702 PYALLLFDQIPQPNLFSWNTLIRAHAS 782
YA +FDQIPQPN+++WNTLIRA+AS
Sbjct: 81 DYARQVFDQIPQPNVYTWNTLIRAYAS 107
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Solanum tuberosum]
Length = 744
Score = 74.3 bits (181), Expect = 4e-11
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = +3
Query: 543 DHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXXXXXXXXXXXPFRHLPYALLLF 722
+HPL+ L+D K + +LKQIHA+MLR+ + S P+ F L YA +F
Sbjct: 35 NHPLVLLID--KCQSIKQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLDYAHKVF 92
Query: 723 DQIPQPNLFSWNTLIRAHAS 782
D+IPQPNLFSWN LIRA++S
Sbjct: 93 DEIPQPNLFSWNALIRAYSS 112
>ref|XP_017983550.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Theobroma cacao]
Length = 733
Score = 73.9 bits (180), Expect = 5e-11
Identities = 39/102 (38%), Positives = 56/102 (54%)
Frame = +3
Query: 480 LNKQFIATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXX 659
L + ++ + T + D P+L ++ L+ +LKQIHA MLR + +PY
Sbjct: 4 LGTRLLSLPRHPTSKTVNNDHDDPVLSRINQCTNLN--QLKQIHAQMLRTGLFFNPYSAS 61
Query: 660 XXXXXXXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHASG 785
PF L YA +FDQIP+PNL++WNTLIR +ASG
Sbjct: 62 KLFAASALSPFSSLDYARKVFDQIPKPNLYTWNTLIRVYASG 103
>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 733
Score = 73.9 bits (180), Expect = 5e-11
Identities = 39/102 (38%), Positives = 56/102 (54%)
Frame = +3
Query: 480 LNKQFIATMMDSNNNTTSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDILSHPYXXX 659
L + ++ + T + D P+L ++ L+ +LKQIHA MLR + +PY
Sbjct: 4 LGTRLLSLPRHPTSKTVNNDHDDPVLSRINQCTNLN--QLKQIHAQMLRTGLFFNPYSAS 61
Query: 660 XXXXXXXXXPFRHLPYALLLFDQIPQPNLFSWNTLIRAHASG 785
PF L YA +FDQIP+PNL++WNTLIR +ASG
Sbjct: 62 KLFAASALSPFSSLDYARKVFDQIPKPNLYTWNTLIRVYASG 103