BLASTX nr result
ID: Ophiopogon25_contig00030719
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00030719
(418 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA60406.1| Pentatricopeptide repeat-containing protein [Apos... 82 1e-15
gb|PKU63419.1| Pentatricopeptide repeat-containing protein [Dend... 82 2e-15
ref|XP_020678567.1| pentatricopeptide repeat-containing protein ... 82 2e-15
ref|XP_020599613.1| putative pentatricopeptide repeat-containing... 82 3e-15
ref|XP_010943475.1| PREDICTED: putative pentatricopeptide repeat... 80 7e-15
gb|ONK55402.1| uncharacterized protein A4U43_UnF3860 [Asparagus ... 74 1e-13
ref|XP_009413035.1| PREDICTED: putative pentatricopeptide repeat... 70 4e-11
gb|OVA00149.1| Pentatricopeptide repeat [Macleaya cordata] 65 1e-09
ref|XP_015945727.1| pentatricopeptide repeat-containing protein ... 64 3e-09
ref|XP_019457418.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-08
gb|OIW02973.1| hypothetical protein TanjilG_13610 [Lupinus angus... 62 1e-08
ref|XP_020968508.1| pentatricopeptide repeat-containing protein ... 62 1e-08
ref|XP_008811169.1| PREDICTED: pentatricopeptide repeat-containi... 61 5e-08
ref|XP_010414340.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-07
gb|OAP10909.1| OTP81 [Arabidopsis thaliana] 60 1e-07
ref|NP_180537.1| Tetratricopeptide repeat (TPR)-like superfamily... 60 1e-07
ref|XP_002879234.1| pentatricopeptide repeat-containing protein ... 59 2e-07
gb|OAY75174.1| Pentatricopeptide repeat-containing protein [Anan... 59 2e-07
ref|XP_010510463.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-07
ref|XP_006293749.1| pentatricopeptide repeat-containing protein ... 59 2e-07
>gb|PKA60406.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 500
Score = 82.4 bits (202), Expect = 1e-15
Identities = 36/87 (41%), Positives = 57/87 (65%)
Frame = -1
Query: 262 LSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSLPNPSPFAFNSLIRAHSSGPNP 83
++ ++ SG+ +P +S+R V++ + DLPLA +AF + P P+ F++N++IRAHS+GP+P
Sbjct: 28 MARAVVSGLWAAEPIVSARTVAACASFDLPLAEIAFAASPRPTAFSYNAMIRAHSAGPSP 87
Query: 82 XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
YPDRF+FPFLLR
Sbjct: 88 SLSFLLFSAMLRTGHYPDRFSFPFLLR 114
>gb|PKU63419.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 474
Score = 82.0 bits (201), Expect = 2e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSLPNPSPFAFNSLIRAHSSGP 89
Q L+ ++ SG+ +PF+S+R+V++ + +DL LA LAFD+ P S F+++S+IRAHS+GP
Sbjct: 31 QILARAVISGLFA-EPFVSARIVAAFAASDLSLAQLAFDASPRRSAFSYSSMIRAHSAGP 89
Query: 88 NPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P YPDRF FPFLLR
Sbjct: 90 TPSNSFILFSRMLHSGFYPDRFVFPFLLR 118
>ref|XP_020678567.1| pentatricopeptide repeat-containing protein At1g59720,
chloroplastic/mitochondrial-like [Dendrobium catenatum]
Length = 515
Score = 82.0 bits (201), Expect = 2e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSLPNPSPFAFNSLIRAHSSGP 89
Q L+ ++ SG+ +PF+S+R+V++ + +DL LA LAFD+ P S F+++S+IRAHS+GP
Sbjct: 31 QILARAVISGLFA-EPFVSARIVAAFAASDLSLAQLAFDASPRRSAFSYSSMIRAHSAGP 89
Query: 88 NPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P YPDRF FPFLLR
Sbjct: 90 TPSNSFILFSRMLHSGFYPDRFVFPFLLR 118
>ref|XP_020599613.1| putative pentatricopeptide repeat-containing protein At5g40405,
partial [Phalaenopsis equestris]
Length = 503
Score = 81.6 bits (200), Expect = 3e-15
Identities = 43/89 (48%), Positives = 58/89 (65%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSLPNPSPFAFNSLIRAHSSGP 89
Q L+ +I S L +PF+S+R+V++ + +DL LA LAFD+ P+ S F+F S+IRAHS+GP
Sbjct: 30 QILARAIIS-TLFAEPFVSARIVAAFAPSDLSLAQLAFDASPHRSAFSFTSMIRAHSAGP 88
Query: 88 NPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P LYPD FTFPFLLR
Sbjct: 89 TPSKSLIIFSRMLHSGLYPDHFTFPFLLR 117
>ref|XP_010943475.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405 [Elaeis guineensis]
Length = 499
Score = 80.5 bits (197), Expect = 7e-15
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSL-PNPSPFAFNSLIRAHSSG 92
Q L+ +I +G+L DPF+S+R V++ + +DLPLA LAF + P PS FAF +LIRAHS+G
Sbjct: 29 QILALAIATGLL-CDPFVSARAVATAAPSDLPLAHLAFRAASPRPSAFAFAALIRAHSAG 87
Query: 91 PNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P+P LYPD F+FPFLLR
Sbjct: 88 PSPDLALHLFSDMLRTGLYPDSFSFPFLLR 117
>gb|ONK55402.1| uncharacterized protein A4U43_UnF3860 [Asparagus officinalis]
Length = 188
Score = 73.9 bits (180), Expect = 1e-13
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAFDSLPNPSPFAFNSLIRAHSSGP 89
Q LSHSITS + +LDPF SS ++SSLS DLPLA+LA LP P P LIRAHSS P
Sbjct: 38 QILSHSITSSLWRLDPFTSSCILSSLSSTDLPLASLALRPLPQPLPLRLQLLIRAHSSAP 97
Query: 88 NP 83
P
Sbjct: 98 PP 99
>ref|XP_009413035.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405 [Musa acuminata subsp. malaccensis]
Length = 497
Score = 69.7 bits (169), Expect = 4e-11
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDADLPLATLAF-DSLPNPSPFAFNSLIRAHSSG 92
+ L+ ++ +G+L DPF+S+R V++ + +DLPLA LAF + P PS FAF +LIRAHS+
Sbjct: 30 RVLARAVVAGLLP-DPFVSARAVAAAAPSDLPLAFLAFRTAAPRPSAFAFAALIRAHSAA 88
Query: 91 PNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P+P LYPDRF L+R
Sbjct: 89 PDPSPAFSHFALMLRSCLYPDRFVLLSLVR 118
>gb|OVA00149.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 634
Score = 65.5 bits (158), Expect = 1e-09
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDA---DLPLATLAFDSLPNPSPFAFNSLIRAHS 98
Q LSH+IT+ + DPFISS+++ SLS + DL LA F +PNP+ FA+N + RA++
Sbjct: 53 QILSHTITTSLFS-DPFISSKLLLSLSSSSSDDLSLARSVFSQIPNPNLFAWNFMFRAYA 111
Query: 97 SGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
+P + PD +TFPF+L+
Sbjct: 112 HSSSPQESIFLYNLMVQNGVSPDNYTFPFILK 143
>ref|XP_015945727.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988091.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988092.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988093.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988094.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988095.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988096.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
ref|XP_020988097.1| pentatricopeptide repeat-containing protein At5g06540-like isoform
X1 [Arachis duranensis]
Length = 475
Score = 64.3 bits (155), Expect = 3e-09
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLS---DADLPLATLAFDSLPNP-SPFAFNSLIRAH 101
Q + I +G ++ DPF +SR++SS + ADL LA+ F SLP P + F +N+LIRAH
Sbjct: 52 QVHAQMILTGRIRQDPFAASRLLSSSALSPFADLTLASRIFSSLPYPPNTFMWNTLIRAH 111
Query: 100 SSGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
+S PNP +P + TFPFLL+
Sbjct: 112 ASSPNPHYSLCLYVSMRKLGAFPGKHTFPFLLK 144
>ref|XP_019457418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Lupinus angustifolius]
Length = 465
Score = 62.4 bits (150), Expect = 1e-08
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLS---DADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
Q + I S ++ DPF +SR++SS + +DL A+ F S+ P+ F +N+LIRAH+
Sbjct: 35 QVHTQMIVSSLIINDPFAASRLISSSALSTFSDLNYASRIFSSIHKPNTFMWNTLIRAHA 94
Query: 97 SGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGPNP P + TFPFLL+
Sbjct: 95 SGPNPRHSLLLYINMRRLGALPGKHTFPFLLK 126
>gb|OIW02973.1| hypothetical protein TanjilG_13610 [Lupinus angustifolius]
Length = 466
Score = 62.4 bits (150), Expect = 1e-08
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLS---DADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
Q + I S ++ DPF +SR++SS + +DL A+ F S+ P+ F +N+LIRAH+
Sbjct: 13 QVHTQMIVSSLIINDPFAASRLISSSALSTFSDLNYASRIFSSIHKPNTFMWNTLIRAHA 72
Query: 97 SGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGPNP P + TFPFLL+
Sbjct: 73 SGPNPRHSLLLYINMRRLGALPGKHTFPFLLK 104
>ref|XP_020968508.1| pentatricopeptide repeat-containing protein At5g06540-like [Arachis
ipaensis]
Length = 483
Score = 62.4 bits (150), Expect = 1e-08
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLS---DADLPLATLAFDSLPNP-SPFAFNSLIRAH 101
Q + I +G ++ DPF +SR++SS + ADL LA+ F SLP P + F +N+LIRAH
Sbjct: 52 QVHAQLILTGRIRQDPFAASRLLSSSALSPFADLTLASRIFSSLPYPPNTFMWNTLIRAH 111
Query: 100 SSGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
+S PNP P + TFPFLL+
Sbjct: 112 ASSPNPHYSLCLYVSMRKLGAIPGKHTFPFLLK 144
>ref|XP_008811169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Phoenix dactylifera]
Length = 531
Score = 60.8 bits (146), Expect = 5e-08
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRVVSSLSDA---DLPLATLAFDSLPNPSPFAFNSLIRAHS 98
+T +H ITSG L DPF +R++++ + A DL A L FD++ +P+ F +N++IRA S
Sbjct: 34 RTHAHIITSG-LSSDPFTLARLLAAAAIAPSGDLRYAKLLFDAVAHPTLFMYNTMIRAFS 92
Query: 97 SGPNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P P + PDR TFPFLL+
Sbjct: 93 QSPEPIDSINYYLRMLRSGISPDRLTFPFLLK 124
>ref|XP_010414340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Camelina sativa]
Length = 736
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT H I +G + DP+ +S++ +S+LS A L A FD +P P+ F +N+LIRA++
Sbjct: 46 QTHGHMIRTGTIA-DPYSASKLFAISALSTFASLEYARKVFDEIPQPNSFTWNTLIRAYA 104
Query: 97 SGPNP-XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 105 SGPDPVRSIWVFLDMVSESQCYPNKYTFPFLVK 137
>gb|OAP10909.1| OTP81 [Arabidopsis thaliana]
Length = 738
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT H I +G DP+ +S++ +++LS A L A FD +P P+ FA+N+LIRA++
Sbjct: 48 QTHGHMIRTGTFS-DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 97 SGPNP-XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
>ref|NP_180537.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING 81; Flags: Precursor
gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gb|AEC08301.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 738
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT H I +G DP+ +S++ +++LS A L A FD +P P+ FA+N+LIRA++
Sbjct: 48 QTHGHMIRTGTFS-DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 97 SGPNP-XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
>ref|XP_002879234.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Arabidopsis lyrata subsp. lyrata]
gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT +H I +G+ DP+ +S++ +++LS A L A FD +P P+ F +N+LIRA++
Sbjct: 49 QTHAHMIRTGMFS-DPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 97 SGPNP--XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIK 141
>gb|OAY75174.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 382
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = -1
Query: 259 SHSITSGVLQLDPFISSRVVSSLS----DADLPLATLAFDSLPNPSPFAFNSLIRAHSSG 92
+ ++ SG L DPF +R+++S + DLP A F + P+P+ F FN++IRA S+G
Sbjct: 27 ARALVSG-LSADPFAFARLLASAALSPVSGDLPYAAALFRAFPSPTLFMFNTMIRALSAG 85
Query: 91 PNPXXXXXXXXXXXXXXLYPDRFTFPFLLR 2
P+P L PDR T PFL+R
Sbjct: 86 PDPSDSLRLYVRMLRSGLSPDRLTLPFLIR 115
>ref|XP_010510463.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Camelina sativa]
Length = 738
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT H I +G + DP+ +S++ +++LS A L A FD +P P+ F +N+LIRA++
Sbjct: 48 QTHGHMIRTGTIA-DPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 106
Query: 97 SGPNP-XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 107 SGPDPVRSIRAFLDMVSESQCYPNKYTFPFLVK 139
>ref|XP_006293749.1| pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Capsella rubella]
gb|EOA26647.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
Length = 739
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -1
Query: 268 QTLSHSITSGVLQLDPFISSRV--VSSLSD-ADLPLATLAFDSLPNPSPFAFNSLIRAHS 98
QT +H I +G DP+ +S++ +++LS A L A FD +P P+ F +N+LIRA++
Sbjct: 49 QTHAHMIRTGTFS-DPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 97 SGPNP-XXXXXXXXXXXXXXLYPDRFTFPFLLR 2
SGP+P YP+++TFPFL++
Sbjct: 108 SGPDPVRSIWIFLDMVSESQCYPNKYTFPFLVK 140