BLASTX nr result
ID: Ophiopogon25_contig00030611
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00030611
(1790 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 168 3e-41
gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu... 158 2e-38
gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus... 130 2e-30
gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposo... 124 2e-27
gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo... 124 2e-26
gb|AAR13295.1| retrovirus-related pol polyprotein, partial [Phas... 113 6e-24
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 113 6e-24
emb|CDP17738.1| unnamed protein product [Coffea canephora] 117 1e-23
ref|XP_022931734.1| uncharacterized protein LOC111437896 [Cucurb... 90 4e-23
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 112 5e-22
gb|PPY92954.1| hypothetical protein C5P31_25600, partial [Escher... 105 2e-21
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 103 2e-20
gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia ander... 99 1e-19
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 94 7e-19
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 94 7e-19
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 98 2e-18
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo... 94 3e-17
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo... 94 3e-17
gb|PON71291.1| Zinc finger, CCHC-type [Parasponia andersonii] 90 5e-17
gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposo... 90 2e-16
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 168 bits (426), Expect = 3e-41
Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 10/306 (3%)
Frame = +2
Query: 884 QGPKDTIELDIRPTEITENDWIRKNRSMCS---DMIISYTRYQI*RDDGVIGEEDL---G 1045
Q ++TI + RP + E W + NR+ C + +Y + V+ ++
Sbjct: 11 QNLEETIMVHERPPKYDEAIWEKMNRNACGVIRSCLEQELKYNVIGVTSVMKMWEILNNK 70
Query: 1046 YLGREIPDEVHR*HVVFETKVIPFATTEGYISQRSSECLQQIACRLVKR*RGIENEDMTL 1225
YL + + + +H ++ F + G ++ L I +E +
Sbjct: 71 YLTKSVENRLH-----LLRRLFGFQMSRGTSLATHVNNYTKLLSNLANVDEKISDEYKAI 125
Query: 1226 ILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHEL-RKDKKTF-GSMSGEALSMQG 1399
LL + PD+EY+TFVL L+NG++S+ Y+EVT AL N++L RKDK+T S SGE LS +G
Sbjct: 126 FLLGSLPDEEYDTFVLILLNGRSSIIYSEVTNALTNYDLRRKDKETSRASTSGETLSTRG 185
Query: 1400 RNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKR--KGKAVESS*T 1573
RN +G H ++K+QC CK+ HW DCPK K K K K +++
Sbjct: 186 RNPYPKG--GNRGRSKSRSHHQLAKNQCAFCKEQEHWKRDCPKLKEKENCKKKGPKANEV 243
Query: 1574 NAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVM 1753
N V G+DS+ SCFSL ITP + + D +WML+S TYHV PRR+ F+ FEK+D GVVVM
Sbjct: 244 N-VAKGDDSDDSCFSLLITPEVNHVDVLDWMLDSGATYHVTPRRDWFASFEKVDGGVVVM 302
Query: 1754 ENNHTC 1771
N+ C
Sbjct: 303 GNDQFC 308
>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
Length = 499
Score = 158 bits (400), Expect = 2e-38
Identities = 86/204 (42%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRK-DKKTFGSMSG 1378
+E+ED ++LL + + ++ F L LING+T++SY EVT+ALVN+ELRK D + F SG
Sbjct: 28 VEDEDKAMLLLCSLSEDDFGMFFLTLINGRTTVSYKEVTSALVNYELRKNDGELFERASG 87
Query: 1379 EALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKN---KRKG 1549
+AL+++GR+ N Q + N ++ ++QC CK+ GHW +CPK K+ K++G
Sbjct: 88 DALAVRGRSPNRQ-RFNHSKSKNRGDHKSVGRNQCAFCKEEGHWKNECPKLKDRVGKQRG 146
Query: 1550 KAVESS*TNA---VTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSC 1720
KAV++S N + D +D +SS +S S+CYADS+EWML+S +H+ P+R+ F+
Sbjct: 147 KAVQASEVNVAKVIGDTSDLDSSGYSCPTLLSVCYADSTEWMLDSGAIFHIYPKRDWFTN 206
Query: 1721 FEKLDSG-VVVMENNHTCPMIRIS 1789
F++L+ G VV+M N+H CP+ IS
Sbjct: 207 FKELERGDVVLMGNDHVCPISGIS 230
>gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus officinalis]
Length = 286
Score = 130 bits (328), Expect = 2e-30
Identities = 76/204 (37%), Positives = 118/204 (57%), Gaps = 8/204 (3%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRK-DKKTFGSMSG 1378
IE+ED ++L + P+ ++ TFV +IN +T++SY EVT+ L+N+ELRK D + SG
Sbjct: 28 IEDEDNAMLLFCSLPEDDFGTFVFNMINERTTVSYKEVTSVLINYELRKGDGEPSEKASG 87
Query: 1379 EALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKN---KRKG 1549
+AL++ + GHW +CP K+ K++G
Sbjct: 88 DALAV----------------------------------REGHWKNECPNLKDRAWKQRG 113
Query: 1550 KAVESS*TN---AVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSC 1720
KAV++ N AV+D +DS+ S +S PS+CYADS+EWM++S T+ +CP+ + FS
Sbjct: 114 KAVQALEVNVAKAVSDHSDSDYSDYSCPALPSVCYADSTEWMMDSGATFRICPKSDWFSS 173
Query: 1721 FEKLDSG-VVVMENNHTCPMIRIS 1789
FE+L+ G VV+MEN+H C + IS
Sbjct: 174 FEELERGDVVLMENDHVCSIGGIS 197
>gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 350
Score = 124 bits (311), Expect = 2e-27
Identities = 96/301 (31%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Frame = +2
Query: 884 QGPKDTIELDIRPTEITENDWIRKNRSMCSDMIISYTR---YQI*RDDG---VIGEEDLG 1045
QG TIE +P + E DW NR C + +R Y ++ ++ E +
Sbjct: 25 QGLDITIE-GKKPESMGEEDWKTLNRLACGTIRSCLSREQKYAFCKETSASKLMTELEEK 83
Query: 1046 YLGREIPDEVHR*HVVFETKVIPFATTEGYISQRSSECLQQIACRLVKR*RGIENEDMTL 1225
+L + +++H +F IP AT +I+ Q+ L+ E+ED+ L
Sbjct: 84 FLKKSSQNKLHMKKRLFRFTYIPGATMNDHITS-----FNQLVADLLNLDVTFEDEDLAL 138
Query: 1226 ILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELR-KDKKTFGSMSGEALSMQGR 1402
+LL + P+ E+E L++GK ++S NEV AL ++ELR KDKK + EAL +GR
Sbjct: 139 MLLGSLPE-EFEFLETTLLHGKVAVSLNEVCGALYSYELRRKDKKDSSEKANEALVARGR 197
Query: 1403 N-LN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNA 1579
+ +GK+ + KD+C C++ GHW DCPK KNK + K V S
Sbjct: 198 PVIQAKGKKKRSKSKA-----KVGKDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVAE 252
Query: 1580 VTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMEN 1759
D +D SL+++ S + SS W+L+S + H+CP RE F F +L+ GVV N
Sbjct: 253 YVDDSDC-----SLAVSGST--SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTAN 305
Query: 1760 N 1762
+
Sbjct: 306 D 306
>gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 561
Score = 124 bits (311), Expect = 2e-26
Identities = 96/301 (31%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Frame = +2
Query: 884 QGPKDTIELDIRPTEITENDWIRKNRSMCSDMIISYTR---YQI*RDDG---VIGEEDLG 1045
QG TIE +P + E DW NR C + +R Y ++ ++ E +
Sbjct: 13 QGLDITIE-GKKPESMGEEDWKTLNRLACGTIRSCLSREQKYAFCKETSASKLMTELEEK 71
Query: 1046 YLGREIPDEVHR*HVVFETKVIPFATTEGYISQRSSECLQQIACRLVKR*RGIENEDMTL 1225
+L + +++H +F IP AT +I+ Q+ L+ E+ED+ L
Sbjct: 72 FLKKSSQNKLHMKKRLFRFTYIPGATMNDHITS-----FNQLVADLLNLDVTFEDEDLAL 126
Query: 1226 ILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELR-KDKKTFGSMSGEALSMQGR 1402
+LL + P+ E+E L++GK ++S NEV AL ++ELR KDKK + EAL +GR
Sbjct: 127 MLLGSLPE-EFEFLETTLLHGKVAVSLNEVCGALYSYELRRKDKKDSSEKANEALVARGR 185
Query: 1403 N-LN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNA 1579
+ +GK+ + KD+C C++ GHW DCPK KNK + K V S
Sbjct: 186 PVIQAKGKKKRSKSKA-----KVGKDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVAE 240
Query: 1580 VTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMEN 1759
D +D SL+++ S + SS W+L+S + H+CP RE F F +L+ GVV N
Sbjct: 241 YVDDSDC-----SLAVSGST--SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTAN 293
Query: 1760 N 1762
+
Sbjct: 294 D 294
>gb|AAR13295.1| retrovirus-related pol polyprotein, partial [Phaseolus vulgaris]
Length = 324
Score = 113 bits (283), Expect = 6e-24
Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
Frame = +2
Query: 917 RPTEITENDWIRKNRSMCSDMIISYTRYQI*RDDGVIGEEDLGYLGREIPDEVHR*H--- 1087
+P E+ E DW NR C + +R Q V E L + + D+ +
Sbjct: 23 KPKEVEEKDWSIINRLACGTIRSCLSREQ---KYVVKNETSAHKLWKALEDKFLKKSGQN 79
Query: 1088 -VVFETKVIPFATTEGYISQRSSECLQQIACRLVKR*RGIENEDMTLILLSTFPDKEYET 1264
++ + ++ F +G Q+ L+ E+ED+ L+L+S+ PD E+E
Sbjct: 80 KLLMKKRLFRFDYQQGTTMNAHITMFNQLVAYLLNLDVKFEDEDLALMLVSSLPD-EFEH 138
Query: 1265 FVLPLINGKTSLSYNEVTAALVNHELRK-DK-KTFGSMSGEALSMQGRNLN*QGKQNXXX 1438
L++GK ++S + V +AL +HELRK DK KT + S EAL +G Q +
Sbjct: 139 LETTLLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQ---QSQTKERR 195
Query: 1439 XXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNAVTDGNDSESSCFS 1618
++KD+C C + GHW DCPK + K K N +D ES
Sbjct: 196 GMCKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEK----VPQDANVAECKSDVESDISL 251
Query: 1619 LSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMENNHTC 1771
+ + Y D EW+L+S TYH+CP R+ F F++LD GVV M N++ C
Sbjct: 252 IVSLSASSYPD--EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPC 300
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 113 bits (282), Expect(2) = 6e-24
Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 1178 RLVKR*RGIENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRKDKK 1357
+ +K+ E+ED+ L+LLS+ PD E+E L++GK ++S + V +AL +HELRK K
Sbjct: 71 KFLKKSVKFEDEDLALMLLSSLPD-EFEHLETTLLHGKENVSLDAVCSALYSHELRKQDK 129
Query: 1358 --TFGSMSGEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQ 1531
T + S EAL ++GR Q + ++KD+C C + GHW DCPK
Sbjct: 130 MRTKSTTSEEALVIRGRQ---QSQTKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKL 186
Query: 1532 KNKRKGKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE* 1711
+ K K N +D ES + + Y D EW+L+S TYH+CP R+
Sbjct: 187 QKKEK----VPQDANVAECKSDVESDISLIVSLSASSYPD--EWILDSGCTYHMCPIRDW 240
Query: 1712 FSCFEKLDSGVVVMENNHTCPMIRI 1786
F F++LD GVV M N++ C + I
Sbjct: 241 FFEFQELDGGVVYMGNDNPCKTVGI 265
Score = 28.5 bits (62), Expect(2) = 6e-24
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 960 VACAVI*SYLTQDIKYDVMMESSAKKI*DISAEKYLTKFI 1079
+AC I S L+++ KY V E+SA K+ +K+L K +
Sbjct: 38 LACGTIRSCLSREQKYAVKNETSAHKLWKALEDKFLKKSV 77
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 117 bits (292), Expect = 1e-23
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Frame = +2
Query: 1166 QIACRLVKR*RGIENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELR 1345
Q+ L+ E+ED+ L+LLS+ PD E+E L++GK ++S + V +AL + ELR
Sbjct: 154 QLVADLLNLDVNFEDEDLALMLLSSLPD-EFEHLETTLLHGKENVSLDAVCSALYSRELR 212
Query: 1346 KD--KKTFGSMSGEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TD 1519
K KK + + EAL +GR Q Q+ ++KD+C C++ GHW D
Sbjct: 213 KQDKKKKKVAAADEALVARGR----QQSQSKGRRGWSKSISRVAKDECAFCREKGHWKKD 268
Query: 1520 CPKQKNKRKGKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCP 1699
CPK K +KGKA + N +D+ES FSL+++ + D EW+L+S TYH+ P
Sbjct: 269 CPKLK--KKGKAPQD--VNVAECKSDAESD-FSLAVSRLTSHPD--EWILDSTCTYHMTP 321
Query: 1700 RRE*FSCFEKLDSGVVVMENNHTCPMIRI 1786
RE F FE+LD G V M N++ C + I
Sbjct: 322 MREWFFEFEELDGGFVYMGNDNPCKTVGI 350
>ref|XP_022931734.1| uncharacterized protein LOC111437896 [Cucurbita moschata]
Length = 1893
Score = 89.7 bits (221), Expect(2) = 4e-23
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 5/201 (2%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHEL-RKDKKTFGSMSG 1378
+++ED L+LL++ P+ Y+ V L++G +++ +V+ AL+N+E+ +K+K T+ S
Sbjct: 1618 LDDEDKALLLLNSLPES-YKFLVTTLLHGAYDINFEDVSNALMNNEVQKKEKGTYQDSSS 1676
Query: 1379 EALSMQGRNLN*Q----GKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRK 1546
L+ + R + G+ + K++C ++ GHW DC K KR
Sbjct: 1677 NVLTARERTSTWKRSECGESRSKSRGKYGNWIKLDKNECAYGRQKGHWKKDCLILKEKR- 1735
Query: 1547 GKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFE 1726
S +N V D + + ++S + S + EW+L+S +YH+C RE F F+
Sbjct: 1736 ------SKSNVVRDDDTDTDNVLTISSSVS----QTREWILDSGCSYHMCYNREMFLDFK 1785
Query: 1727 KLDSGVVVMENNHTCPMIRIS 1789
+ + GVV M N+ TC M IS
Sbjct: 1786 EFNGGVVYMGNDSTCKMTGIS 1806
Score = 49.3 bits (116), Expect(2) = 4e-23
Identities = 38/136 (27%), Positives = 63/136 (46%)
Frame = +3
Query: 801 QTKIEVVTFDGMINFDM*H*KVSDTLLGKGRRILLSWI*DQQR*LKMIGLGRTVACAVI* 980
++ +EV F+G NF + +VSD L+ + L + + A +I
Sbjct: 1488 RSNLEVEKFNGTNNFGVWRGEVSDLLVMQDLDATLQEVMLEDMTEAEWTKLNWQASGIIR 1547
Query: 981 SYLTQDIKYDVMMESSAKKI*DISAEKYLTKFIDNTXXXXXXXXXXXXXXGISVSDHLNA 1160
S L +D KY M + AK++ D KY+ K ++N GIS++DHL+
Sbjct: 1548 SCLGKDQKYPFMKVTMAKELWDKLEAKYMQKSVENKLYLKKKLFRFYYKEGISMADHLDD 1607
Query: 1161 YNKLLAD*SNVDGGSK 1208
+NK++ D N+D K
Sbjct: 1608 FNKIITDLINLDDEDK 1623
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 112 bits (280), Expect = 5e-22
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 2/196 (1%)
Frame = +2
Query: 1205 ENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRK-DK-KTFGSMSG 1378
E+ED+ L+LLS+ PD E+E L++GK ++S + V +AL +HELRK DK KT + S
Sbjct: 81 EDEDLALMLLSSLPD-EFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSE 139
Query: 1379 EALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAV 1558
EAL +GR Q + ++KD+C C + GHW DCPK + K K +
Sbjct: 140 EALVARGRQ---QSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQKKEK--VL 194
Query: 1559 ESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDS 1738
+ + N +D ES + + Y D EW+L+S TYH+CP R+ F F++LD
Sbjct: 195 QDA--NVAECKSDVESDISLIVSLSASLYLD--EWILDSGCTYHMCPIRDWFFEFQELDG 250
Query: 1739 GVVVMENNHTCPMIRI 1786
GVV M N++ C + I
Sbjct: 251 GVVYMGNDNPCKTVGI 266
>gb|PPY92954.1| hypothetical protein C5P31_25600, partial [Escherichia coli]
Length = 292
Score = 105 bits (262), Expect = 2e-21
Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Frame = +2
Query: 917 RPTEITENDWIRKNRSMCSDMIISYTRYQI*RDDGVIGEEDLGYLGREIPDEVHR*H--- 1087
RP I E DW NR C + R Q E L + + D+ + +
Sbjct: 23 RPDVIGEEDWKIINRVACGTIRSYLAREQ---KYPYTKETSASKLWKALEDKFLKKNSQN 79
Query: 1088 -VVFETKVIPFATTEGYISQRSSECLQQIACRLVKR*RGIENEDMTLILLSTFPDKEYET 1264
+ + ++ F G ++ L ++ D+ L+LL++ PD EYE
Sbjct: 80 KLYMKKRLFHFTYVPGTTMNEHITSFNKLVTDLQNMDTTYDDGDLALMLLASLPD-EYEH 138
Query: 1265 FVLPLINGKTSLSYNEVTAALVNHELRKDKKTFGSMSGEALSMQGRNLN*QGKQNXXXXX 1444
L++G +S EV +AL ++E RK +K G GEAL ++GR N Q
Sbjct: 139 LETTLLHGNDEISLREVCSALYSYEQRKREKQKGG-EGEALFVRGRPQN----QTRTKKG 193
Query: 1445 XXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRK---GKAVESS*TNAVTDGNDSESSCF 1615
SKD+C C++ GHW DCPK KNK K GKA+ S V D +DS+ F
Sbjct: 194 RSKSRSRPSKDECAFCREKGHWKKDCPKLKNKAKHNNGKAIMDS---NVADCDDSD---F 247
Query: 1616 SLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVV 1747
SL T S +D W+++S +YH+CP R+ F F++ + GV+
Sbjct: 248 SLVTTESSTSSDI--WLMDSACSYHMCPNRDWFVEFQEGEYGVI 289
>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 365
Score = 103 bits (258), Expect = 2e-20
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 4/199 (2%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRKDKKTFGSMSGE 1381
+E E+ L+LLS+ P K Y+ V ++ GK +L EV A L+++E+R + T S++ +
Sbjct: 28 LEEENEALLLLSSLP-KSYDHLVTTILYGKDTLKVEEVNATLLSNEVRNKQSTGESLTVK 86
Query: 1382 ALSMQGRNLN*QGKQNXXXXXXXXXXHNISKD---QCRKCKKYGHW*TDCPKQKNKRKGK 1552
+GR+ N G Q +ISK+ +C CKK GHW DCPK+ +++ K
Sbjct: 87 TSQDRGRSKNKFGNQ--------YRYRSISKENDNRCYYCKKEGHWKRDCPKKSKQQQQK 138
Query: 1553 AVESS*TNAVTDGNDSESSC-FSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEK 1729
+ A DSE+ C FS C S W+L+S +YH+CP R+ FS +
Sbjct: 139 KSGEEASVASRLEKDSETLCTFS-------CMDSSDSWILDSDCSYHMCPFRDWFSTYSI 191
Query: 1730 LDSGVVVMENNHTCPMIRI 1786
D G V+M NN C + I
Sbjct: 192 HDGGRVIMGNNSECKSVGI 210
>gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia andersonii]
Length = 215
Score = 98.6 bits (244), Expect = 1e-19
Identities = 62/184 (33%), Positives = 104/184 (56%), Gaps = 1/184 (0%)
Frame = +2
Query: 1223 LILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHEL-RKDKKTFGSMSGEALSMQG 1399
++L+ + PD E + + L++ K LS++EV+AAL NHE+ +KD+K ++ EAL+ +G
Sbjct: 1 MLLIGSLPD-ELDHLCITLLHRKEKLSFDEVSAALYNHEVWKKDQKENRNIPVEALTARG 59
Query: 1400 RNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNA 1579
+ + + ++ + KD+C C + HW DCPK +NK K KA +
Sbjct: 60 CSQSHKQEKRGRSRSKG----RVGKDECAFCYEKRHWKKDCPKLQNKGKDKATSDAYVAE 115
Query: 1580 VTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMEN 1759
V D ++S+ + S S+T + + EW+L S TYH+ P +E F FE++D VV M N
Sbjct: 116 VKD-DESDFALVSQSMT-----SQNDEWILASGCTYHMYPHKEWFFNFEEVDGRVVYMGN 169
Query: 1760 NHTC 1771
+ +C
Sbjct: 170 DESC 173
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 93.6 bits (231), Expect(2) = 7e-19
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRKD--KKTFGSMS 1375
I++ED +I+L + P YE FV ++ G+ L+ EV AL + ELRK K +
Sbjct: 642 IDDEDQAIIVLCSLPPS-YENFVDTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNE 700
Query: 1376 GEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKA 1555
GE L +GR+ G + + + QC CKKYGH DCPK+K K + +
Sbjct: 701 GEGLVARGRSKAKGGSSSKSHPRS----QSKKRIQCYYCKKYGHMKVDCPKRKEKSESQE 756
Query: 1556 VESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLD 1735
++ N V D + S + L+++ S YA W+L++ T+H+ ++ FS +EK
Sbjct: 757 QQNDRAN-VADADSSSDAEIVLAVSDS--YA-GGRWILDTGATFHISTSKDAFSTYEK-H 811
Query: 1736 SGVVVMENNHTCPMIRI 1786
SG V+M N+H C ++ I
Sbjct: 812 SGSVLMGNDHACQVMGI 828
Score = 31.2 bits (69), Expect(2) = 7e-19
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 987 LTQDIKYDVMMESSAKKI*DISAEKYLTKFIDNTXXXXXXXXXXXXXXGISVSDHLNAYN 1166
L ++ +V E +A + KY+TK + N G VS HL+ +N
Sbjct: 570 LGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHLDKFN 629
Query: 1167 KLLAD*SNVD 1196
++ D +N+D
Sbjct: 630 SIIMDLNNID 639
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 93.6 bits (231), Expect(2) = 7e-19
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRKD--KKTFGSMS 1375
I++ED +I+L + P YE FV ++ G+ L+ EV AL + ELRK K +
Sbjct: 663 IDDEDQAIIVLCSLPPS-YENFVDTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNE 721
Query: 1376 GEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKA 1555
GE L +GR+ G + + + QC CKKYGH DCPK+K K + +
Sbjct: 722 GEGLVARGRSKAKGGSSSKSHPRS----QSKKRIQCYYCKKYGHMKVDCPKRKEKSESQE 777
Query: 1556 VESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLD 1735
++ N V D + S + L+++ S YA W+L++ T+H+ ++ FS +EK
Sbjct: 778 QQNDRAN-VADADSSSDAEIVLAVSDS--YA-GGRWILDTGATFHISTSKDAFSTYEK-H 832
Query: 1736 SGVVVMENNHTCPMIRI 1786
SG V+M N+H C ++ I
Sbjct: 833 SGSVLMGNDHACQVMGI 849
Score = 31.2 bits (69), Expect(2) = 7e-19
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 987 LTQDIKYDVMMESSAKKI*DISAEKYLTKFIDNTXXXXXXXXXXXXXXGISVSDHLNAYN 1166
L ++ +V E +A + KY+TK + N G VS HL+ +N
Sbjct: 591 LGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHLDKFN 650
Query: 1167 KLLAD*SNVD 1196
++ D +N+D
Sbjct: 651 SIIMDLNNID 660
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 97.8 bits (242), Expect(2) = 2e-18
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELR-KDKKTFGSMSG 1378
IE+ED LILL + P +E FV I GK ++S EV +AL + ELR K T +
Sbjct: 136 IEDEDAALILLVSLP-MSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQP 194
Query: 1379 EALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAV 1558
L R +G++N D C CK+ GHW DCPK+K + + ++V
Sbjct: 195 SGLFTSSR----KGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSV 250
Query: 1559 ESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDS 1738
++ A D N E +++ S W+L+S +YH+CPRRE F+ +E++D
Sbjct: 251 SAA--VAEEDTNSEED----IALVADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDG 304
Query: 1739 GVVVMENNHTCPMI 1780
G + M N+ C ++
Sbjct: 305 GSISMANSSVCKVV 318
Score = 25.0 bits (53), Expect(2) = 2e-18
Identities = 17/70 (24%), Positives = 27/70 (38%)
Frame = +3
Query: 987 LTQDIKYDVMMESSAKKI*DISAEKYLTKFIDNTXXXXXXXXXXXXXXGISVSDHLNAYN 1166
L D+ +V E +A + Y+TK + N G + +HL N
Sbjct: 64 LADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLN 123
Query: 1167 KLLAD*SNVD 1196
LL + N+D
Sbjct: 124 TLLLELRNID 133
>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 341
Score = 94.4 bits (233), Expect = 3e-17
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Frame = +2
Query: 1127 EGYISQRSSECLQQIACRLVKR*RGIENEDMTLILLSTFPDKEYETFVLPLINGKTSLSY 1306
EG + + Q+ L +++ED ++LLS+ P + Y+ FV +I G++SLS
Sbjct: 111 EGESIHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLP-RAYDNFVDTIIFGRSSLSM 169
Query: 1307 NEVTAALVNHELRK--DKKTFGSMSGEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQ 1480
EV AL + EL++ G+ SGE L ++GR +++ N + ++
Sbjct: 170 EEVKTALQSWELKRRITDSYGGTSSGEGLMVRGRM---DERKSFQRRRSKSRSKNKNNNK 226
Query: 1481 CRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSE 1660
C C+K GHW +CP+ K K K E V++ +D + F S + +
Sbjct: 227 CHNCQKEGHWKRNCPELK-KDKVSTSEFGGAAVVSEESDGGNVLFVSS------NVNDDD 279
Query: 1661 WMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMENNHTC 1771
W+L+S T+H+ P R+ F+ F+ +D G V+M N+ C
Sbjct: 280 WILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGAC 316
>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 344
Score = 94.4 bits (233), Expect = 3e-17
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Frame = +2
Query: 1127 EGYISQRSSECLQQIACRLVKR*RGIENEDMTLILLSTFPDKEYETFVLPLINGKTSLSY 1306
EG + + Q+ L +++ED ++LLS+ P + Y+ FV +I G++SLS
Sbjct: 114 EGESIHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLP-RAYDNFVDTIIFGRSSLSM 172
Query: 1307 NEVTAALVNHELRK--DKKTFGSMSGEALSMQGRNLN*QGKQNXXXXXXXXXXHNISKDQ 1480
EV AL + EL++ G+ SGE L ++GR +++ N + ++
Sbjct: 173 EEVKTALQSWELKRRITDSYGGTSSGEGLMVRGRM---DERKSFQRRRSKSRSKNKNNNK 229
Query: 1481 CRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSE 1660
C C+K GHW +CP+ K K K E V++ +D + F S + +
Sbjct: 230 CHNCQKEGHWKRNCPELK-KDKVSTSEFGGAAVVSEESDGGNVLFVSS------NVNDDD 282
Query: 1661 WMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMENNHTC 1771
W+L+S T+H+ P R+ F+ F+ +D G V+M N+ C
Sbjct: 283 WILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGAC 319
>gb|PON71291.1| Zinc finger, CCHC-type [Parasponia andersonii]
Length = 175
Score = 89.7 bits (221), Expect = 5e-17
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +2
Query: 1223 LILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELRKD-KKTFGSMSGEALSMQG 1399
++L+ + PD E + + L++GK LS++EV+ L HE++K +K M EA + +
Sbjct: 1 MLLIGSLPD-ELDYLCITLLHGKEKLSFDEVSTVLYIHEIQKKYQKENREMPAEAFAARR 59
Query: 1400 RNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKRKGKAVESS*TNA 1579
R+ + + ++N K++C C + HW DC K KNK KGKA +
Sbjct: 60 RSQSRKQEKNDKSHSKGRP----GKNKCAFCHEKRHWKKDCLKLKNKGKGKATFDA---Y 112
Query: 1580 VTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCFEKLDSGVVVMEN 1759
V + D+ES F+L P I D EW+L+S TY++CP +E F FE+L+ GV + N
Sbjct: 113 VAEVEDNESD-FALVSQPMISQYD--EWILDSGCTYYMCPHKEWFFNFEELNGGVFYIGN 169
Query: 1760 N 1762
+
Sbjct: 170 H 170
>gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 269
Score = 90.1 bits (222), Expect = 2e-16
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Frame = +2
Query: 1202 IENEDMTLILLSTFPDKEYETFVLPLINGKTSLSYNEVTAALVNHELR-KDKKTFGSMSG 1378
IE+ED +ILL++ P YE+FV L GK ++ EV +++ + ELR K ++G
Sbjct: 45 IEDEDAAMILLASLPPS-YESFVNSLSVGKECITMEEVKSSMHSRELRFKASANSEGVNG 103
Query: 1379 EAL-----SMQGRNLN*QGKQNXXXXXXXXXXHNISKDQCRKCKKYGHW*TDCPKQKNKR 1543
L + G+ QGK+ +D C CK+ GHW DCPK++N++
Sbjct: 104 AGLLAFNSTKNGKKKKEQGKKKIKFNP---------RDICNYCKEPGHWKKDCPKKRNQK 154
Query: 1544 KGKAVESS*TNAVTDGNDSESSCFSLSITPSICYADSSEWMLNSCTTYHVCPRRE*FSCF 1723
A T + S + LSI + ++ + +W+L+S +YH+CP R F +
Sbjct: 155 S--------VAAATQEDSSFENELVLSIVDNHQHS-AEQWVLDSGCSYHMCPNRSWFLTY 205
Query: 1724 EKLDSGVVVMENNHTCPMIRI 1786
EK SG V M N+ C +I I
Sbjct: 206 EKKSSGDVFMGNDMACKIIGI 226