BLASTX nr result

ID: Ophiopogon25_contig00030002 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00030002
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257598.1| uncharacterized serine-rich protein C215.13-...    60   5e-08

>ref|XP_020257598.1| uncharacterized serine-rich protein C215.13-like [Asparagus
           officinalis]
 ref|XP_020257599.1| uncharacterized serine-rich protein C215.13-like [Asparagus
           officinalis]
 ref|XP_020257600.1| uncharacterized serine-rich protein C215.13-like [Asparagus
           officinalis]
 gb|ONK75772.1| uncharacterized protein A4U43_C03F20390 [Asparagus officinalis]
          Length = 699

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
 Frame = -2

Query: 276 RSLKPSLPAKVQRKSGKLENAGGRVKENTLYGIEPKILKSGPKSARKGLKKDIEH----- 112
           RSLKP  PAK + K GK E+   + KE TL+ IEPK +K+  K   K L K+  H     
Sbjct: 441 RSLKPLSPAKNRAKVGKPEDTNEKAKEKTLHVIEPKPMKASSKPKAKELNKNRAHSSSST 500

Query: 111 ------XXXXXXXXXXSHEKEENEYSESTLSEASQLILNKEKT 1
                           SH+KEE++  E TL +A++L L K+KT
Sbjct: 501 SSSPSSSSSSSSLSVSSHDKEESKKFECTLRKATELALAKDKT 543


Top