BLASTX nr result
ID: Ophiopogon25_contig00029932
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00029932
(377 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial ... 117 7e-28
ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 ... 117 7e-28
ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 ... 117 7e-28
ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 ... 117 7e-28
ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 ... 117 7e-28
ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 107 2e-24
ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 ... 106 4e-24
gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas... 105 8e-24
ref|XP_020114589.1| DNA mismatch repair protein MSH6 [Ananas com... 105 8e-24
gb|PON72400.1| DNA mismatch repair protein [Trema orientalis] 103 5e-23
ref|XP_020698156.1| DNA mismatch repair protein MSH6-like [Dendr... 101 6e-23
gb|PON61699.1| DNA mismatch repair [Parasponia andersonii] 101 2e-22
gb|PKU87676.1| DNA mismatch repair protein MSH6 [Dendrobium cate... 101 2e-22
gb|PPS14953.1| hypothetical protein GOBAR_AA05604 [Gossypium bar... 95 5e-22
ref|XP_017983072.1| PREDICTED: DNA mismatch repair protein MSH6 ... 100 8e-22
gb|KJB09461.1| hypothetical protein B456_001G143900 [Gossypium r... 99 1e-21
gb|POE57964.1| dna mismatch repair protein msh6 [Quercus suber] 99 1e-21
ref|XP_023894914.1| DNA mismatch repair protein MSH6 [Quercus su... 99 1e-21
ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 ... 99 1e-21
ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 ... 99 1e-21
>gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial [Asparagus
officinalis]
Length = 976
Score = 117 bits (292), Expect = 7e-28
Identities = 55/87 (63%), Positives = 71/87 (81%), Gaps = 8/87 (9%)
Frame = +3
Query: 6 KKAPLLIPSP--------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGK 161
KK PLLIPSP P++ +KK FS+DV+GK++ VF PLDKTW +G VKSF++++GK
Sbjct: 54 KKTPLLIPSPTKPNPKAPPSTTEKKSFSEDVVGKKISVFWPLDKTWYDGHVKSFNKLTGK 113
Query: 162 HLVQYEDAEEEVIDLGKERIEWVEEEA 242
HL+QYEDAEEEV+DL KE+IEWV+EEA
Sbjct: 114 HLIQYEDAEEEVLDLEKEKIEWVKEEA 140
>ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 [Asparagus officinalis]
Length = 1309
Score = 117 bits (292), Expect = 7e-28
Identities = 55/87 (63%), Positives = 71/87 (81%), Gaps = 8/87 (9%)
Frame = +3
Query: 6 KKAPLLIPSP--------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGK 161
KK PLLIPSP P++ +KK FS+DV+GK++ VF PLDKTW +G VKSF++++GK
Sbjct: 54 KKTPLLIPSPTKPNPKAPPSTTEKKSFSEDVVGKKISVFWPLDKTWYDGHVKSFNKLTGK 113
Query: 162 HLVQYEDAEEEVIDLGKERIEWVEEEA 242
HL+QYEDAEEEV+DL KE+IEWV+EEA
Sbjct: 114 HLIQYEDAEEEVLDLEKEKIEWVKEEA 140
>ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 [Asparagus officinalis]
Length = 1311
Score = 117 bits (292), Expect = 7e-28
Identities = 55/87 (63%), Positives = 71/87 (81%), Gaps = 8/87 (9%)
Frame = +3
Query: 6 KKAPLLIPSP--------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGK 161
KK PLLIPSP P++ +KK FS+DV+GK++ VF PLDKTW +G VKSF++++GK
Sbjct: 54 KKTPLLIPSPTKPNPKAPPSTTEKKSFSEDVVGKKISVFWPLDKTWYDGHVKSFNKLTGK 113
Query: 162 HLVQYEDAEEEVIDLGKERIEWVEEEA 242
HL+QYEDAEEEV+DL KE+IEWV+EEA
Sbjct: 114 HLIQYEDAEEEVLDLEKEKIEWVKEEA 140
>ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 [Asparagus officinalis]
Length = 1312
Score = 117 bits (292), Expect = 7e-28
Identities = 55/87 (63%), Positives = 71/87 (81%), Gaps = 8/87 (9%)
Frame = +3
Query: 6 KKAPLLIPSP--------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGK 161
KK PLLIPSP P++ +KK FS+DV+GK++ VF PLDKTW +G VKSF++++GK
Sbjct: 54 KKTPLLIPSPTKPNPKAPPSTTEKKSFSEDVVGKKISVFWPLDKTWYDGHVKSFNKLTGK 113
Query: 162 HLVQYEDAEEEVIDLGKERIEWVEEEA 242
HL+QYEDAEEEV+DL KE+IEWV+EEA
Sbjct: 114 HLIQYEDAEEEVLDLEKEKIEWVKEEA 140
>ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 [Asparagus officinalis]
Length = 1314
Score = 117 bits (292), Expect = 7e-28
Identities = 55/87 (63%), Positives = 71/87 (81%), Gaps = 8/87 (9%)
Frame = +3
Query: 6 KKAPLLIPSP--------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGK 161
KK PLLIPSP P++ +KK FS+DV+GK++ VF PLDKTW +G VKSF++++GK
Sbjct: 54 KKTPLLIPSPTKPNPKAPPSTTEKKSFSEDVVGKKISVFWPLDKTWYDGHVKSFNKLTGK 113
Query: 162 HLVQYEDAEEEVIDLGKERIEWVEEEA 242
HL+QYEDAEEEV+DL KE+IEWV+EEA
Sbjct: 114 HLIQYEDAEEEVLDLEKEKIEWVKEEA 140
>ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6
[Elaeis guineensis]
Length = 1288
Score = 107 bits (266), Expect = 2e-24
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
Frame = +3
Query: 3 QKKAPLLI--------PSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
+K PLL+ P P +A ++ +S++V+G+R+RVF PLDK W EGSVK FDE SG
Sbjct: 65 KKNKPLLVIPSIPASKPRTPLTAGERAYSEEVVGRRIRVFWPLDKAWYEGSVKYFDEASG 124
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVEEE 239
KHLVQY+DAEEE +DLGKE+ EWVEEE
Sbjct: 125 KHLVQYDDAEEESLDLGKEKFEWVEEE 151
>ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 [Phoenix dactylifera]
Length = 1292
Score = 106 bits (264), Expect = 4e-24
Identities = 52/87 (59%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = +3
Query: 3 QKKAPLLI--PSP------PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
+K PLL+ PSP P +A+++ S+DV+G+R+RVF PLDK W EGSVKSFDE S
Sbjct: 61 KKNKPLLVIPPSPASNPRTPPTARERACSEDVVGRRIRVFWPLDKAWHEGSVKSFDEASR 120
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVEEE 239
KHLV+Y+DAEEE ++LGKE+ EWVEEE
Sbjct: 121 KHLVEYDDAEEESLNLGKEKFEWVEEE 147
>gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas comosus]
Length = 1101
Score = 105 bits (262), Expect = 8e-24
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 8/87 (9%)
Frame = +3
Query: 3 QKKAPLLIP--------SPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
QKK PL++P +P + KK +S D +GKR+RVF PLD W +G VKSFDE SG
Sbjct: 63 QKKTPLVVPPTSSSNPKTPSAAEKKAAYSTDAVGKRIRVFWPLDNAWYDGCVKSFDENSG 122
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVEEE 239
KHLVQY+D EEE ++L KE+IEWVEEE
Sbjct: 123 KHLVQYDDGEEEAVELAKEKIEWVEEE 149
>ref|XP_020114589.1| DNA mismatch repair protein MSH6 [Ananas comosus]
Length = 1299
Score = 105 bits (262), Expect = 8e-24
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 8/87 (9%)
Frame = +3
Query: 3 QKKAPLLIP--------SPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
QKK PL++P +P + KK +S D +GKR+RVF PLD W +G VKSFDE SG
Sbjct: 71 QKKTPLVVPPTSSSNPKTPSAAEKKAAYSTDAVGKRIRVFWPLDNAWYDGCVKSFDENSG 130
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVEEE 239
KHLVQY+D EEE ++L KE+IEWVEEE
Sbjct: 131 KHLVQYDDGEEEAVELAKEKIEWVEEE 157
>gb|PON72400.1| DNA mismatch repair protein [Trema orientalis]
Length = 1293
Score = 103 bits (256), Expect = 5e-23
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +3
Query: 12 APLLIPSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQYEDAEE 191
+P PSP A KKP+ +V+G+R++V+ PLDK+W EG VKS+DE GKHLVQY+DAEE
Sbjct: 91 SPSPSPSPLTPASKKPYGDEVVGRRIKVYWPLDKSWYEGFVKSYDEGEGKHLVQYDDAEE 150
Query: 192 EVIDLGKERIEWVEE 236
E ++LGKE+IEWVE+
Sbjct: 151 EFLELGKEKIEWVEQ 165
>ref|XP_020698156.1| DNA mismatch repair protein MSH6-like [Dendrobium catenatum]
Length = 359
Score = 101 bits (251), Expect = 6e-23
Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Frame = +3
Query: 6 KKAPLLIPSPPNS---------AKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
+K PLL+ +PP+ KK P+S +V+GKR+RV+ PLDK+W EG V+SFDE SG
Sbjct: 56 QKKPLLVITPPSVPSIDTCSSVGKKVPYSSEVVGKRIRVYWPLDKSWYEGHVRSFDEASG 115
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVE 233
KH++QY+D EEE +D+ KE+IEWVE
Sbjct: 116 KHVIQYDDGEEEFLDMEKEKIEWVE 140
>gb|PON61699.1| DNA mismatch repair [Parasponia andersonii]
Length = 1293
Score = 101 bits (252), Expect = 2e-22
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +3
Query: 12 APLLIPSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQYEDAEE 191
+P PSP KKP+ +V+G+R++V+ PLDK+W EG VKS+DE GKHLVQY+DAEE
Sbjct: 91 SPSPSPSPLTPGSKKPYGDEVVGRRIKVYWPLDKSWYEGFVKSYDEGEGKHLVQYDDAEE 150
Query: 192 EVIDLGKERIEWVEE 236
E ++LGKE+IEWVE+
Sbjct: 151 EFLELGKEKIEWVEQ 165
>gb|PKU87676.1| DNA mismatch repair protein MSH6 [Dendrobium catenatum]
Length = 532
Score = 101 bits (251), Expect = 2e-22
Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Frame = +3
Query: 6 KKAPLLIPSPPNS---------AKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSG 158
+K PLL+ +PP+ KK P+S +V+GKR+RV+ PLDK+W EG V+SFDE SG
Sbjct: 56 QKKPLLVITPPSVPSIDTCSSVGKKVPYSSEVVGKRIRVYWPLDKSWYEGHVRSFDEASG 115
Query: 159 KHLVQYEDAEEEVIDLGKERIEWVE 233
KH++QY+D EEE +D+ KE+IEWVE
Sbjct: 116 KHVIQYDDGEEEFLDMEKEKIEWVE 140
>gb|PPS14953.1| hypothetical protein GOBAR_AA05604 [Gossypium barbadense]
Length = 178
Score = 95.1 bits (235), Expect = 5e-22
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Frame = +3
Query: 9 KAPLLI-----PSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQ 173
K PLL+ P+S F +V+ KR+RV PLDK W EG VKSFD+VSGKHL+Q
Sbjct: 21 KKPLLVIGQSLAPTPSSPLNITFGDEVVDKRLRVHWPLDKAWYEGVVKSFDKVSGKHLIQ 80
Query: 174 YEDAEEEVIDLGKERIEWVEE 236
Y+D+EEE +DLGKE+IEWVEE
Sbjct: 81 YDDSEEEELDLGKEKIEWVEE 101
>ref|XP_017983072.1| PREDICTED: DNA mismatch repair protein MSH6 [Theobroma cacao]
Length = 1316
Score = 99.8 bits (247), Expect = 8e-22
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 5/81 (6%)
Frame = +3
Query: 9 KAPLLI----PSP-PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQ 173
K PLL+ PSP P++ K + ++V+ KR+RV+ PLDK W EG VKSFD+ SGKHLVQ
Sbjct: 73 KKPLLVIGQTPSPTPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKESGKHLVQ 132
Query: 174 YEDAEEEVIDLGKERIEWVEE 236
Y+DAEEE +DLGKE+IEW++E
Sbjct: 133 YDDAEEEELDLGKEKIEWIKE 153
>gb|KJB09461.1| hypothetical protein B456_001G143900 [Gossypium raimondii]
Length = 1022
Score = 99.4 bits (246), Expect = 1e-21
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Frame = +3
Query: 9 KAPLLI----PSP-PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQ 173
K PLL+ P+P P+S F +V+ KR+RV+ PLDK W EG VKSFD+VSGKHL+Q
Sbjct: 75 KKPLLVIGQSPAPTPSSPLNITFGDEVVDKRLRVYWPLDKAWYEGVVKSFDKVSGKHLIQ 134
Query: 174 YEDAEEEVIDLGKERIEWVEE 236
Y+D+EEE +DLGKE+IEWVEE
Sbjct: 135 YDDSEEEELDLGKEKIEWVEE 155
>gb|POE57964.1| dna mismatch repair protein msh6 [Quercus suber]
Length = 1211
Score = 99.4 bits (246), Expect = 1e-21
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = +3
Query: 6 KKAPLLI--PSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQYE 179
K PLL+ SP K+ + DV+GKR+RVF PLDK W EG+VKSFD+V+ KHLVQYE
Sbjct: 76 KNKPLLVISASPLTPNDKRSYGDDVVGKRIRVFWPLDKAWYEGTVKSFDKVANKHLVQYE 135
Query: 180 DAEEEVIDLGKERIEWVEE 236
D EEE++DL KE+ EWV+E
Sbjct: 136 DEEEELLDLEKEKFEWVQE 154
>ref|XP_023894914.1| DNA mismatch repair protein MSH6 [Quercus suber]
Length = 1294
Score = 99.4 bits (246), Expect = 1e-21
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = +3
Query: 6 KKAPLLI--PSPPNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQYE 179
K PLL+ SP K+ + DV+GKR+RVF PLDK W EG+VKSFD+V+ KHLVQYE
Sbjct: 76 KNKPLLVISASPLTPNDKRSYGDDVVGKRIRVFWPLDKAWYEGTVKSFDKVANKHLVQYE 135
Query: 180 DAEEEVIDLGKERIEWVEE 236
D EEE++DL KE+ EWV+E
Sbjct: 136 DEEEELLDLEKEKFEWVQE 154
>ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Gossypium
raimondii]
Length = 1297
Score = 99.4 bits (246), Expect = 1e-21
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Frame = +3
Query: 9 KAPLLI----PSP-PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQ 173
K PLL+ P+P P+S F +V+ KR+RV+ PLDK W EG VKSFD+VSGKHL+Q
Sbjct: 75 KKPLLVIGQSPAPTPSSPLNITFGDEVVDKRLRVYWPLDKAWYEGVVKSFDKVSGKHLIQ 134
Query: 174 YEDAEEEVIDLGKERIEWVEE 236
Y+D+EEE +DLGKE+IEWVEE
Sbjct: 135 YDDSEEEELDLGKEKIEWVEE 155
>ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Gossypium
raimondii]
gb|KJB09460.1| hypothetical protein B456_001G143900 [Gossypium raimondii]
Length = 1315
Score = 99.4 bits (246), Expect = 1e-21
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Frame = +3
Query: 9 KAPLLI----PSP-PNSAKKKPFSQDVIGKRVRVFRPLDKTWDEGSVKSFDEVSGKHLVQ 173
K PLL+ P+P P+S F +V+ KR+RV+ PLDK W EG VKSFD+VSGKHL+Q
Sbjct: 75 KKPLLVIGQSPAPTPSSPLNITFGDEVVDKRLRVYWPLDKAWYEGVVKSFDKVSGKHLIQ 134
Query: 174 YEDAEEEVIDLGKERIEWVEE 236
Y+D+EEE +DLGKE+IEWVEE
Sbjct: 135 YDDSEEEELDLGKEKIEWVEE 155