BLASTX nr result
ID: Ophiopogon25_contig00029683
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00029683
(359 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia s... 117 3e-28
gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia s... 117 3e-28
ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage fact... 114 4e-27
ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage fact... 114 4e-27
ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage fact... 114 4e-27
ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage fact... 114 4e-27
ref|XP_020531519.1| polyadenylation and cleavage factor homolog ... 112 2e-26
ref|XP_020531518.1| polyadenylation and cleavage factor homolog ... 112 2e-26
gb|ERN19518.1| hypothetical protein AMTR_s00062p00031880 [Ambore... 112 2e-26
ref|XP_011628430.1| polyadenylation and cleavage factor homolog ... 112 2e-26
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 112 2e-26
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact... 112 3e-26
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 112 3e-26
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 112 3e-26
ref|XP_020674647.1| polyadenylation and cleavage factor homolog ... 111 4e-26
ref|XP_020674645.1| polyadenylation and cleavage factor homolog ... 111 4e-26
gb|EOY28631.1| PCF11P-similar protein 4, putative isoform 2 [The... 111 6e-26
ref|XP_007026008.2| PREDICTED: polyadenylation and cleavage fact... 111 6e-26
gb|EOY28630.1| PCF11P-similar protein 4, putative isoform 1 [The... 111 6e-26
ref|XP_010052824.1| PREDICTED: polyadenylation and cleavage fact... 110 8e-26
>gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia shenzhenica]
Length = 985
Score = 117 bits (294), Expect = 3e-28
Identities = 51/61 (83%), Positives = 58/61 (95%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QT+CALCGE F+DFYSDE EEWMY+GAVYLNAP+GN++GLD+SQLGPIVHAKCRSES EG
Sbjct: 922 QTICALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNIEGLDRSQLGPIVHAKCRSESTEG 981
Query: 179 S 177
S
Sbjct: 982 S 982
>gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia shenzhenica]
Length = 986
Score = 117 bits (294), Expect = 3e-28
Identities = 51/61 (83%), Positives = 58/61 (95%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QT+CALCGE F+DFYSDE EEWMY+GAVYLNAP+GN++GLD+SQLGPIVHAKCRSES EG
Sbjct: 923 QTICALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNIEGLDRSQLGPIVHAKCRSESTEG 982
Query: 179 S 177
S
Sbjct: 983 S 983
>ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X4 [Musa acuminata subsp. malaccensis]
Length = 838
Score = 114 bits (286), Expect = 4e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMYKGAVYLNAP+G ++GLD+SQLGPIVHAKCRSESNE
Sbjct: 775 QNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKCRSESNEC 834
Query: 179 S 177
S
Sbjct: 835 S 835
>ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 114 bits (286), Expect = 4e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMYKGAVYLNAP+G ++GLD+SQLGPIVHAKCRSESNE
Sbjct: 893 QNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKCRSESNEC 952
Query: 179 S 177
S
Sbjct: 953 S 953
>ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 114 bits (286), Expect = 4e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMYKGAVYLNAP+G ++GLD+SQLGPIVHAKCRSESNE
Sbjct: 893 QNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKCRSESNEC 952
Query: 179 S 177
S
Sbjct: 953 S 953
>ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 991
Score = 114 bits (286), Expect = 4e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMYKGAVYLNAP+G ++GLD+SQLGPIVHAKCRSESNE
Sbjct: 928 QNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKCRSESNEC 987
Query: 179 S 177
S
Sbjct: 988 S 988
>ref|XP_020531519.1| polyadenylation and cleavage factor homolog 4 isoform X3 [Amborella
trichopoda]
Length = 906
Score = 112 bits (281), Expect = 2e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q+VCALCGE FDDFYSDE EEWMYKGAVYLNAP G+++G+DKSQLGPIVHAKCRSES G
Sbjct: 822 QSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSESTTG 881
>ref|XP_020531518.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Amborella
trichopoda]
Length = 1015
Score = 112 bits (281), Expect = 2e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q+VCALCGE FDDFYSDE EEWMYKGAVYLNAP G+++G+DKSQLGPIVHAKCRSES G
Sbjct: 931 QSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSESTTG 990
>gb|ERN19518.1| hypothetical protein AMTR_s00062p00031880 [Amborella trichopoda]
Length = 1045
Score = 112 bits (281), Expect = 2e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q+VCALCGE FDDFYSDE EEWMYKGAVYLNAP G+++G+DKSQLGPIVHAKCRSES G
Sbjct: 970 QSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSESTTG 1029
>ref|XP_011628430.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_011628431.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_020531516.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_020531517.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
Length = 1054
Score = 112 bits (281), Expect = 2e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q+VCALCGE FDDFYSDE EEWMYKGAVYLNAP G+++G+DKSQLGPIVHAKCRSES G
Sbjct: 970 QSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSESTTG 1029
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 112 bits (281), Expect = 2e-26
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QTVCALCGE F+DFYSD+ EEWMYKGAVYLNAP G +GLD+SQLGPIVHAKCRSES EG
Sbjct: 1007 QTVCALCGEPFEDFYSDDTEEWMYKGAVYLNAPEGYSEGLDRSQLGPIVHAKCRSESTEG 1066
Query: 179 S 177
S
Sbjct: 1067 S 1067
>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 1000
Score = 112 bits (279), Expect = 3e-26
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMY+GAVYLNAP+GN++GLD+SQLGPIVH+KCRSE+NE
Sbjct: 937 QNVCALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNLEGLDRSQLGPIVHSKCRSETNEC 996
Query: 179 S 177
S
Sbjct: 997 S 997
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 112 bits (279), Expect = 3e-26
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q VCALCGE F+DFYSDE EEWMY+GAVYLNAP+GN++GLD+SQLGPIVH+KCRSE+NE
Sbjct: 976 QNVCALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNLEGLDRSQLGPIVHSKCRSETNEC 1035
Query: 179 S 177
S
Sbjct: 1036 S 1036
>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 112 bits (279), Expect = 3e-26
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QTVCALCGE F+DFYSD+AEEWMYKGAVYLNAP G +GLD+ QLGPIVHAKCRSES EG
Sbjct: 1000 QTVCALCGEPFEDFYSDDAEEWMYKGAVYLNAPEGYSEGLDRLQLGPIVHAKCRSESTEG 1059
Query: 179 S 177
S
Sbjct: 1060 S 1060
>ref|XP_020674647.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Dendrobium
catenatum]
gb|PKU82431.1| hypothetical protein MA16_Dca005436 [Dendrobium catenatum]
Length = 969
Score = 111 bits (278), Expect = 4e-26
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QTVCALCGE F+DFYSDE EEWMY+ AVY+NAPNG+++GLD+SQLGPIVH KCRSES EG
Sbjct: 906 QTVCALCGEPFEDFYSDETEEWMYREAVYMNAPNGDIEGLDRSQLGPIVHIKCRSESAEG 965
Query: 179 S 177
S
Sbjct: 966 S 966
>ref|XP_020674645.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
ref|XP_020674646.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
Length = 973
Score = 111 bits (278), Expect = 4e-26
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
QTVCALCGE F+DFYSDE EEWMY+ AVY+NAPNG+++GLD+SQLGPIVH KCRSES EG
Sbjct: 910 QTVCALCGEPFEDFYSDETEEWMYREAVYMNAPNGDIEGLDRSQLGPIVHIKCRSESAEG 969
Query: 179 S 177
S
Sbjct: 970 S 970
>gb|EOY28631.1| PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 111 bits (277), Expect = 6e-26
Identities = 47/58 (81%), Positives = 56/58 (96%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESN 186
Q+VCALCGE FDDFYSDE EEWMY+GAVY+NAPNG+++G+D+SQLGPIVHAKCRSES+
Sbjct: 650 QSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESS 707
>ref|XP_007026008.2| PREDICTED: polyadenylation and cleavage factor homolog 4 [Theobroma
cacao]
Length = 1001
Score = 111 bits (277), Expect = 6e-26
Identities = 47/58 (81%), Positives = 56/58 (96%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESN 186
Q+VCALCGE FDDFYSDE EEWMY+GAVY+NAPNG+++G+D+SQLGPIVHAKCRSES+
Sbjct: 918 QSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESS 975
>gb|EOY28630.1| PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
Length = 1004
Score = 111 bits (277), Expect = 6e-26
Identities = 47/58 (81%), Positives = 56/58 (96%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESN 186
Q+VCALCGE FDDFYSDE EEWMY+GAVY+NAPNG+++G+D+SQLGPIVHAKCRSES+
Sbjct: 921 QSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESS 978
>ref|XP_010052824.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Eucalyptus
grandis]
gb|KCW76939.1| hypothetical protein EUGRSUZ_D01301 [Eucalyptus grandis]
Length = 981
Score = 110 bits (276), Expect = 8e-26
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = -1
Query: 359 QTVCALCGEFFDDFYSDEAEEWMYKGAVYLNAPNGNVDGLDKSQLGPIVHAKCRSESNEG 180
Q CALCGE FDDFYSDE EEWMYKGAVY+NAP+G+ G+++SQLGPIVHAKCRSESNE
Sbjct: 898 QNACALCGEPFDDFYSDETEEWMYKGAVYMNAPDGSTAGMERSQLGPIVHAKCRSESNEV 957
Query: 179 S*GAF 165
S G F
Sbjct: 958 SPGNF 962