BLASTX nr result
ID: Ophiopogon25_contig00029636
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00029636
(915 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 167 2e-65
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 150 3e-63
ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II tra... 164 3e-63
gb|OAY79976.1| Mediator of RNA polymerase II transcription subun... 145 6e-63
ref|XP_020108025.1| mediator of RNA polymerase II transcription ... 144 7e-63
ref|XP_020108026.1| mediator of RNA polymerase II transcription ... 144 7e-63
ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II tra... 153 3e-62
ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II tra... 153 3e-62
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 153 4e-62
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 153 4e-62
ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II tra... 153 2e-61
ref|NP_001346283.1| uncharacterized protein LOC100193939 [Zea ma... 148 4e-56
gb|ONM60561.1| Mediator of RNA polymerase II transcription subun... 148 4e-56
gb|ONM60553.1| Mediator of RNA polymerase II transcription subun... 148 4e-56
gb|ONM60567.1| Mediator of RNA polymerase II transcription subun... 148 4e-56
gb|ONM60565.1| Mediator of RNA polymerase II transcription subun... 148 4e-56
gb|ONM60560.1| Mediator of RNA polymerase II transcription subun... 148 4e-56
gb|ONM60571.1| Mediator of RNA polymerase II transcription subun... 148 5e-56
gb|ONM60577.1| Mediator of RNA polymerase II transcription subun... 148 5e-56
gb|ONM60562.1| Mediator of RNA polymerase II transcription subun... 148 5e-56
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 167 bits (424), Expect(5) = 2e-65
Identities = 82/152 (53%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
VH+ SCY G LVSLTITFK++KS+ YI+ VVGQALE+CAT C W S PI
Sbjct: 959 VHIKSCYPRGMPPMLPLPMAALVSLTITFKLDKSVEYIHGVVGQALENCATGCTWPSMPI 1018
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPP--GPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP +RD D +AQLIRSCF SFL P G +H+T H V
Sbjct: 1019 IGALWTQKVRRWHDFIVLSCSRSPFSRDKDAVAQLIRSCFTSFLGPSVVGGSHITAHRGV 1078
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
N +LG ++D+G L +AP ++YLRTCRT D
Sbjct: 1079 NGLLGQFMSDQGVRLPIAPGFLYLRTCRTFHD 1110
Score = 88.2 bits (217), Expect(5) = 2e-65
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = -3
Query: 358 NFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAG 179
+ KS + SL AA +GVQ A+LG LLCI GG+ +VQVLYEETLP +L+ A E++ AG
Sbjct: 1140 HLKSSRISLAAAASGVQQVATLGTCLLCIAGGVEMVQVLYEETLPTMLLSAGGEKLGGAG 1199
Query: 178 EIAPVLKGYALAYMVIQC 125
++ +L+GYALAYM+I C
Sbjct: 1200 PVSNILQGYALAYMLILC 1217
Score = 40.0 bits (92), Expect(5) = 2e-65
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS + + + SR R +HM+F+ + GN L CDPA W
Sbjct: 1221 VWGVGNTSPAYASVFSSRRARVIGIHMDFVTGAVEGNIILRCDPATW 1267
Score = 23.1 bits (48), Expect(5) = 2e-65
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F++ +I LVI WA K+
Sbjct: 1113 FVNEVIFKLVIEWAHKL 1129
Score = 22.3 bits (46), Expect(5) = 2e-65
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3
Query: 913 EMKEILASAGV 881
E+KEILASAGV
Sbjct: 949 EIKEILASAGV 959
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 150 bits (378), Expect(5) = 3e-63
Identities = 75/152 (49%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
VH+ SCY G LVSLTITFK++KSL Y++ +VGQALE+CA C S PI
Sbjct: 961 VHIASCYPRGMPPMLPLPLAALVSLTITFKLDKSLEYVHGIVGQALENCAAGCSRPSMPI 1020
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP D + + QLIRSCF+SFL P G + L+ + V
Sbjct: 1021 IGALWTQKVRRWHDFIVLSCCLSPFIGDKEAVTQLIRSCFSSFLGPSITGGSLLSANRGV 1080
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
N +LG A+ D+G L +AP ++YLRTCRT D
Sbjct: 1081 NGLLGQALADQGVRLPIAPGFLYLRTCRTFHD 1112
Score = 82.4 bits (202), Expect(5) = 3e-63
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
+SG+ SL AAV+GV++ A+LGASLLC GG+ LVQ LYEE+LP L+L+ E++ AG +
Sbjct: 1144 RSGRMSLAAAVSGVKEVATLGASLLCSVGGVHLVQALYEESLP-TLLLSAAEKLGGAGPV 1202
Query: 172 APVLKGYALAYMVI 131
+ +L+GY +AYMVI
Sbjct: 1203 SNILEGYVMAYMVI 1216
Score = 52.0 bits (123), Expect(5) = 3e-63
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS +T+ Y S+ R MHM+F+ V+ GN LGCDPAMW
Sbjct: 1222 VWGIGNTSPAYTSVYSSKRARVIEMHMDFVAGVVEGNISLGCDPAMW 1268
Score = 26.9 bits (58), Expect(5) = 3e-63
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 422 RFISNIILCLVINWAQKM 369
RF++++IL LVI WA K+
Sbjct: 1114 RFVTDVILKLVIEWANKL 1131
Score = 22.7 bits (47), Expect(5) = 3e-63
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGV SC
Sbjct: 951 EIKEILASAGVHIASC 966
>ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 164 bits (414), Expect(5) = 3e-63
Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
VH+ SCY G LVSLTITFK+EKS YI+ VVGQALE+CAT C W S PI
Sbjct: 991 VHINSCYPRGLPPMLPLPMAALVSLTITFKLEKSSEYIHGVVGQALENCATGCTWPSMPI 1050
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP +R+ D + QLIRSCF+SFL P G +H+T V
Sbjct: 1051 IGALWTQKVRRWHDFIVLSCSRSPFSREKDAVVQLIRSCFSSFLGPSVAGGSHMTADRGV 1110
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPDV 424
N +LG ++D+G L +AP ++YLRTCR PD+
Sbjct: 1111 NGLLGRYMSDQGVRLPVAPGFLYLRTCRNFPDI 1143
Score = 78.2 bits (191), Expect(5) = 3e-63
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = -3
Query: 382 GPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAK 203
GP R KS + SL +A++GVQ A+LGASLL + GG++ VQ++YEETLP +L+ A
Sbjct: 1169 GPTR-----LKSSRISLVSAISGVQHVATLGASLLFVAGGVQFVQIMYEETLPTLLLSAG 1223
Query: 202 EEEVEPAGEIAPVLKGYALAYMVIQC 125
E++ ++ +L+GY +AYM+I C
Sbjct: 1224 AEKLGGTETVSNILQGYVMAYMLIIC 1249
Score = 45.1 bits (105), Expect(5) = 3e-63
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS +T+ + S R +HM+F+ M GN LGCDPA+W
Sbjct: 1253 VWGVGNTSPAYTSVFSSMRARVIGIHMDFVAGAMEGNIILGCDPAIW 1299
Score = 23.9 bits (50), Expect(5) = 3e-63
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 425 LRFISNIILCLVINWAQKM 369
+ F++ +I LVI WA K+
Sbjct: 1143 IHFVNKVIFKLVIEWAHKL 1161
Score = 22.7 bits (47), Expect(5) = 3e-63
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGV SC
Sbjct: 981 EVKEILASAGVHINSC 996
>gb|OAY79976.1| Mediator of RNA polymerase II transcription subunit 33A [Ananas
comosus]
Length = 1256
Score = 145 bits (365), Expect(5) = 6e-63
Identities = 74/154 (48%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V V SCY G LVSLTITFK++K+ YI+ VVGQALE+CA W S PI
Sbjct: 883 VCVNSCYPRGMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPI 942
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP----NHLTPHC 529
I +LW+QK+ W D+I+ C SP +RD + +AQLIRSCF+SFL P +H+ P+
Sbjct: 943 IGSLWTQKVRRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSSFLGPSPSEGSFSHVMPNR 1002
Query: 528 SVNAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
V +LG A+T++G L + P ++YLRTCRT D
Sbjct: 1003 GVIGLLGQAITEQGVRLPITPGFLYLRTCRTFHD 1036
Score = 92.4 bits (228), Expect(5) = 6e-63
Identities = 45/77 (58%), Positives = 60/77 (77%)
Frame = -3
Query: 364 SVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEP 185
+ KSG+ SL AA++GVQ ASLGASLLC+ GG LVQV+YEETLP VL+ A+EE+
Sbjct: 1064 AARLKSGRRSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETLPTVLLSAREEKSGM 1123
Query: 184 AGEIAPVLKGYALAYMV 134
AG ++ +L+GYA+AYM+
Sbjct: 1124 AGPVSCILEGYAMAYML 1140
Score = 47.4 bits (111), Expect(5) = 6e-63
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W S +T+ Y SR R +HM+F+V V+ GN LGCDPA W
Sbjct: 1147 VWGLRSKSPAYTSIYSSRRVRVIRVHMDFMVGVLEGNILLGCDPATW 1193
Score = 25.8 bits (55), Expect(5) = 6e-63
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL LVI WA K+
Sbjct: 1039 FVSEVILKLVIEWAHKL 1055
Score = 22.3 bits (46), Expect(5) = 6e-63
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3
Query: 913 EMKEILASAGV 881
E+KEILASAGV
Sbjct: 873 EIKEILASAGV 883
>ref|XP_020108025.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X1 [Ananas comosus]
Length = 1304
Score = 144 bits (362), Expect(5) = 7e-63
Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V V SCY G LVSLTITFK++K+ YI+ VVGQALE+CA W S PI
Sbjct: 931 VCVNSCYPRGMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPI 990
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP----NHLTPHC 529
I +LW+QK+ W D+I+ C SP +RD + +AQLIRSCF++FL P +H+ P+
Sbjct: 991 IGSLWTQKVRRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSTFLGPSPSEGSFSHVMPNR 1050
Query: 528 SVNAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
V +LG A+T++G L + P ++YLRTCRT D
Sbjct: 1051 GVIGLLGQAITEQGVRLPITPGFLYLRTCRTFHD 1084
Score = 92.4 bits (228), Expect(5) = 7e-63
Identities = 45/77 (58%), Positives = 60/77 (77%)
Frame = -3
Query: 364 SVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEP 185
+ KSG+ SL AA++GVQ ASLGASLLC+ GG LVQV+YEETLP VL+ A+EE+
Sbjct: 1112 AARLKSGRRSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETLPTVLLSAREEKSGM 1171
Query: 184 AGEIAPVLKGYALAYMV 134
AG ++ +L+GYA+AYM+
Sbjct: 1172 AGPVSCILEGYAMAYML 1188
Score = 48.1 bits (113), Expect(5) = 7e-63
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W S +T+ Y SR R +HM+F+V V+ GN LGCDPA W
Sbjct: 1195 VWGLRSKSAAYTSIYSSRRVRVIRVHMDFMVGVLEGNILLGCDPATW 1241
Score = 25.8 bits (55), Expect(5) = 7e-63
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL LVI WA K+
Sbjct: 1087 FVSEVILKLVIEWAHKL 1103
Score = 22.3 bits (46), Expect(5) = 7e-63
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3
Query: 913 EMKEILASAGV 881
E+KEILASAGV
Sbjct: 921 EIKEILASAGV 931
>ref|XP_020108026.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X2 [Ananas comosus]
Length = 1076
Score = 144 bits (362), Expect(5) = 7e-63
Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V V SCY G LVSLTITFK++K+ YI+ VVGQALE+CA W S PI
Sbjct: 703 VCVNSCYPRGMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPI 762
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP----NHLTPHC 529
I +LW+QK+ W D+I+ C SP +RD + +AQLIRSCF++FL P +H+ P+
Sbjct: 763 IGSLWTQKVRRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSTFLGPSPSEGSFSHVMPNR 822
Query: 528 SVNAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
V +LG A+T++G L + P ++YLRTCRT D
Sbjct: 823 GVIGLLGQAITEQGVRLPITPGFLYLRTCRTFHD 856
Score = 92.4 bits (228), Expect(5) = 7e-63
Identities = 45/77 (58%), Positives = 60/77 (77%)
Frame = -3
Query: 364 SVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEP 185
+ KSG+ SL AA++GVQ ASLGASLLC+ GG LVQV+YEETLP VL+ A+EE+
Sbjct: 884 AARLKSGRRSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETLPTVLLSAREEKSGM 943
Query: 184 AGEIAPVLKGYALAYMV 134
AG ++ +L+GYA+AYM+
Sbjct: 944 AGPVSCILEGYAMAYML 960
Score = 48.1 bits (113), Expect(5) = 7e-63
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W S +T+ Y SR R +HM+F+V V+ GN LGCDPA W
Sbjct: 967 VWGLRSKSAAYTSIYSSRRVRVIRVHMDFMVGVLEGNILLGCDPATW 1013
Score = 25.8 bits (55), Expect(5) = 7e-63
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL LVI WA K+
Sbjct: 859 FVSEVILKLVIEWAHKL 875
Score = 22.3 bits (46), Expect(5) = 7e-63
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3
Query: 913 EMKEILASAGV 881
E+KEILASAGV
Sbjct: 693 EIKEILASAGV 703
>ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Phoenix dactylifera]
Length = 818
Score = 153 bits (386), Expect(4) = 3e-62
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
+H+ SCY G LVSLTITFK++KSL Y ++++GQALE+CAT W S PI
Sbjct: 447 IHIASCYPRGMPPMLPLPMAALVSLTITFKLDKSLEYTHSILGQALENCATGSSWPSMPI 506
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP RD D +AQLIRSCF+SFL P +H + + +
Sbjct: 507 IGALWTQKVRRWHDFIVLSCSRSPFTRDKDAVAQLIRSCFSSFLGPSITEGSHFSANRGI 566
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
+ +LG A+ D+G L +AP ++YLRTCRT D
Sbjct: 567 HGLLGQAMADQGLRLPIAPGFLYLRTCRTFHD 598
Score = 85.1 bits (209), Expect(4) = 3e-62
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = -3
Query: 385 TGPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILA 206
+GP R +SG+ SL AAV+ VQ+ A LGA+LLCI GG+ LVQVLYEE+LP +L+ A
Sbjct: 624 SGPAR-----LRSGRLSLAAAVSRVQEVAMLGATLLCIAGGVLLVQVLYEESLPTLLLSA 678
Query: 205 KEEEVEPAGEIAPVLKGYALAYMVI 131
EE++ AG + +L+GY +AYM+I
Sbjct: 679 GEEKLVGAGPASNILEGYVMAYMLI 703
Score = 49.7 bits (117), Expect(4) = 3e-62
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS +T+ Y SR R +HM+F+ VM GN +GCDPA W
Sbjct: 709 VWGIGNTSPAYTSVYSSRRARVIGIHMDFVAAVMEGNISVGCDPATW 755
Score = 22.3 bits (46), Expect(4) = 3e-62
Identities = 11/16 (68%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAG+ SC
Sbjct: 437 EIKEILASAGIHIASC 452
>ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Phoenix dactylifera]
Length = 762
Score = 153 bits (386), Expect(4) = 3e-62
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
+H+ SCY G LVSLTITFK++KSL Y ++++GQALE+CAT W S PI
Sbjct: 391 IHIASCYPRGMPPMLPLPMAALVSLTITFKLDKSLEYTHSILGQALENCATGSSWPSMPI 450
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP RD D +AQLIRSCF+SFL P +H + + +
Sbjct: 451 IGALWTQKVRRWHDFIVLSCSRSPFTRDKDAVAQLIRSCFSSFLGPSITEGSHFSANRGI 510
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
+ +LG A+ D+G L +AP ++YLRTCRT D
Sbjct: 511 HGLLGQAMADQGLRLPIAPGFLYLRTCRTFHD 542
Score = 85.1 bits (209), Expect(4) = 3e-62
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = -3
Query: 385 TGPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILA 206
+GP R +SG+ SL AAV+ VQ+ A LGA+LLCI GG+ LVQVLYEE+LP +L+ A
Sbjct: 568 SGPAR-----LRSGRLSLAAAVSRVQEVAMLGATLLCIAGGVLLVQVLYEESLPTLLLSA 622
Query: 205 KEEEVEPAGEIAPVLKGYALAYMVI 131
EE++ AG + +L+GY +AYM+I
Sbjct: 623 GEEKLVGAGPASNILEGYVMAYMLI 647
Score = 49.7 bits (117), Expect(4) = 3e-62
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS +T+ Y SR R +HM+F+ VM GN +GCDPA W
Sbjct: 653 VWGIGNTSPAYTSVYSSRRARVIGIHMDFVAAVMEGNISVGCDPATW 699
Score = 22.3 bits (46), Expect(4) = 3e-62
Identities = 11/16 (68%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAG+ SC
Sbjct: 381 EIKEILASAGIHIASC 396
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 153 bits (386), Expect(5) = 4e-62
Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V++ SCY G LVSLTITFK++KSL Y++ VV QALE+CA C W S PI
Sbjct: 982 VNIASCYPRGMPPMLPLPMAALVSLTITFKLDKSLDYVHGVVAQALENCAAGCSWPSMPI 1041
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ SP RD + + QLIRSCF+SFL P G +HL+ + V
Sbjct: 1042 IGALWTQKIRRWHDFIVLSSSFSPFTRDKEAVTQLIRSCFSSFLGPSVTGGSHLSANRGV 1101
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
N +LG A+ D G L +AP ++YLRTCRT D
Sbjct: 1102 NGLLGQAMADHGVRLPIAPGFVYLRTCRTFHD 1133
Score = 83.2 bits (204), Expect(5) = 4e-62
Identities = 43/85 (50%), Positives = 64/85 (75%)
Frame = -3
Query: 385 TGPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILA 206
+GP R +SG+ SL AAV+GV++ A+LGASLLC+ GG++LVQVLYEE+LP L+L+
Sbjct: 1159 SGPAR-----LRSGRLSLAAAVSGVKEVATLGASLLCVAGGVQLVQVLYEESLP-TLLLS 1212
Query: 205 KEEEVEPAGEIAPVLKGYALAYMVI 131
E++ G ++ +L+GY +AYM+I
Sbjct: 1213 AWEKLGGTGPVSNILEGYVMAYMLI 1237
Score = 45.8 bits (107), Expect(5) = 4e-62
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + ++++Y SR R HM+F+ V+ GN LGCDPAMW
Sbjct: 1243 VWGIGNSCPAYSSSYSSRRARVIGRHMDFVAGVVEGNISLGCDPAMW 1289
Score = 25.0 bits (53), Expect(5) = 4e-62
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F++++IL LVI WA K+
Sbjct: 1136 FVTDVILKLVIEWANKL 1152
Score = 22.7 bits (47), Expect(5) = 4e-62
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGV SC
Sbjct: 972 EIKEILASAGVNIASC 987
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 153 bits (386), Expect(5) = 4e-62
Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V++ SCY G LVSLTITFK++KSL Y++ VV QALE+CA C W S PI
Sbjct: 961 VNIASCYPRGMPPMLPLPMAALVSLTITFKLDKSLDYVHGVVAQALENCAAGCSWPSMPI 1020
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ SP RD + + QLIRSCF+SFL P G +HL+ + V
Sbjct: 1021 IGALWTQKIRRWHDFIVLSSSFSPFTRDKEAVTQLIRSCFSSFLGPSVTGGSHLSANRGV 1080
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
N +LG A+ D G L +AP ++YLRTCRT D
Sbjct: 1081 NGLLGQAMADHGVRLPIAPGFVYLRTCRTFHD 1112
Score = 83.2 bits (204), Expect(5) = 4e-62
Identities = 43/85 (50%), Positives = 64/85 (75%)
Frame = -3
Query: 385 TGPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILA 206
+GP R +SG+ SL AAV+GV++ A+LGASLLC+ GG++LVQVLYEE+LP L+L+
Sbjct: 1138 SGPAR-----LRSGRLSLAAAVSGVKEVATLGASLLCVAGGVQLVQVLYEESLP-TLLLS 1191
Query: 205 KEEEVEPAGEIAPVLKGYALAYMVI 131
E++ G ++ +L+GY +AYM+I
Sbjct: 1192 AWEKLGGTGPVSNILEGYVMAYMLI 1216
Score = 45.8 bits (107), Expect(5) = 4e-62
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + ++++Y SR R HM+F+ V+ GN LGCDPAMW
Sbjct: 1222 VWGIGNSCPAYSSSYSSRRARVIGRHMDFVAGVVEGNISLGCDPAMW 1268
Score = 25.0 bits (53), Expect(5) = 4e-62
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F++++IL LVI WA K+
Sbjct: 1115 FVTDVILKLVIEWANKL 1131
Score = 22.7 bits (47), Expect(5) = 4e-62
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGV SC
Sbjct: 951 EIKEILASAGVNIASC 966
>ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Elaeis guineensis]
Length = 1330
Score = 153 bits (386), Expect(4) = 2e-61
Identities = 76/152 (50%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
VH+ SCY G LVSL+ITFK++KSL Y + +VGQALE+CAT W S PI
Sbjct: 959 VHIASCYPRGMPPMLPLPMAALVSLSITFKLDKSLEYTHGIVGQALENCATGSSWPSMPI 1018
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRP--PGPNHLTPHCSV 523
I ALW+QK+ W D+I+ C SP RD D +AQLIRSCF+SFL P +H + + V
Sbjct: 1019 IGALWTQKVRRWHDFIVLSCSRSPFTRDKDAVAQLIRSCFSSFLGPSITEGSHFSANRGV 1078
Query: 522 NAILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
+ +LG A+ D+G L +AP ++YLRTCRT D
Sbjct: 1079 HGLLGQAMADQGLRLPIAPGFLYLRTCRTFHD 1110
Score = 79.7 bits (195), Expect(4) = 2e-61
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = -3
Query: 385 TGPRRCASVNFKSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILA 206
TGP R +S + SL AAV+ VQ+ A LGA+LLC+ GG+ LVQVLYEE+ P +L+ +
Sbjct: 1136 TGPAR-----LRSSRLSLAAAVSRVQEVAMLGANLLCVAGGVLLVQVLYEESWPTLLLSS 1190
Query: 205 KEEEVEPAGEIAPVLKGYALAYMVI 131
EE++ AG ++ +L+GY +AY +I
Sbjct: 1191 GEEKLVGAGPVSNILEGYVMAYTLI 1215
Score = 52.0 bits (123), Expect(4) = 2e-61
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W TS +T+ Y SR R +HM+F+ VM GN +GCDPAMW
Sbjct: 1221 VWGIGNTSPAYTSVYSSRRARVIGIHMDFVAAVMEGNISVGCDPAMW 1267
Score = 22.7 bits (47), Expect(4) = 2e-61
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGV SC
Sbjct: 949 EIKEILASAGVHIASC 964
>ref|NP_001346283.1| uncharacterized protein LOC100193939 [Zea mays]
gb|ONM60548.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
gb|ONM60555.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
gb|ONM60564.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1304
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 934 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 993
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 994 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 1053
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 1054 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 1084
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 1116 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1175
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1176 SSTLQGYAMANMLFYC 1191
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1195 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1241
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 924 EVKEILASAGVQINSC 939
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 1087 FVSEVILKQVIEWAHKL 1103
>gb|ONM60561.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1297
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 927 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 986
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 987 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 1046
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 1047 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 1077
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 1109 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1168
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1169 SSTLQGYAMANMLFYC 1184
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1188 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1234
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 917 EVKEILASAGVQINSC 932
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 1080 FVSEVILKQVIEWAHKL 1096
>gb|ONM60553.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1265
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 895 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 954
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 955 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 1014
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 1015 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 1045
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 1077 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1136
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1137 SSTLQGYAMANMLFYC 1152
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1156 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1202
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 885 EVKEILASAGVQINSC 900
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 1048 FVSEVILKQVIEWAHKL 1064
>gb|ONM60567.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1246
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 876 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 935
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 936 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 995
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 996 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 1026
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 1058 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1117
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1118 SSTLQGYAMANMLFYC 1133
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1137 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1183
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 866 EVKEILASAGVQINSC 881
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 1029 FVSEVILKQVIEWAHKL 1045
>gb|ONM60565.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1201
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 831 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 890
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 891 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 950
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 951 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 981
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 1013 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1072
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1073 SSTLQGYAMANMLFYC 1088
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1092 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1138
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 821 EVKEILASAGVQINSC 836
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 984 FVSEVILKQVIEWAHKL 1000
>gb|ONM60560.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1159
Score = 148 bits (373), Expect(5) = 4e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 789 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 848
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 849 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 908
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 909 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 939
Score = 75.9 bits (185), Expect(5) = 4e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 971 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 1030
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 1031 SSTLQGYAMANMLFYC 1046
Score = 37.4 bits (85), Expect(5) = 4e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 1050 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 1096
Score = 24.6 bits (52), Expect(5) = 4e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 779 EVKEILASAGVQINSC 794
Score = 23.5 bits (49), Expect(5) = 4e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 942 FVSEVILKQVIEWAHKL 958
>gb|ONM60571.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1009
Score = 148 bits (373), Expect(5) = 5e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 639 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 698
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 699 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 758
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 759 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 789
Score = 75.9 bits (185), Expect(5) = 5e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 821 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 880
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 881 SSTLQGYAMANMLFYC 896
Score = 37.4 bits (85), Expect(5) = 5e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 900 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 946
Score = 24.6 bits (52), Expect(5) = 5e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 629 EVKEILASAGVQINSC 644
Score = 23.5 bits (49), Expect(5) = 5e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 792 FVSEVILKQVIEWAHKL 808
>gb|ONM60577.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 915
Score = 148 bits (373), Expect(5) = 5e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 545 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 604
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 605 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 664
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 665 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 695
Score = 75.9 bits (185), Expect(5) = 5e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 727 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 786
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 787 SSTLQGYAMANMLFYC 802
Score = 37.4 bits (85), Expect(5) = 5e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 806 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 852
Score = 24.6 bits (52), Expect(5) = 5e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 535 EVKEILASAGVQINSC 550
Score = 23.5 bits (49), Expect(5) = 5e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 698 FVSEVILKQVIEWAHKL 714
>gb|ONM60562.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 710
Score = 148 bits (373), Expect(5) = 5e-56
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = -1
Query: 876 VHVPSCYASGXXXXXXXXXXXLVSLTITFKIEKSLHYINAVVGQALESCATRCPWSSKPI 697
V + SCY G LVSLTITFK+++SL YI V+GQALE+CA W S PI
Sbjct: 340 VQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPI 399
Query: 696 ISALWSQKLCSWRDYIIFDCICSPIARDMDTIAQLIRSCFASFLRPPGP-NHLTPHCSVN 520
I ALW+QK+ W D+I+ C+ SP RD D +AQLI+SCF+SFL+ + + + V
Sbjct: 400 IGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVG 459
Query: 519 AILGGAVTDEGYHLHMAPVYIYLRTCRTSPD 427
A+LG ++T++G L MAP +IYLRTCRT D
Sbjct: 460 ALLGDSITNQGLRLPMAPGFIYLRTCRTFHD 490
Score = 75.9 bits (185), Expect(5) = 5e-56
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = -3
Query: 352 KSGKSSLTAAVAGVQDAASLGASLLCITGGLRLVQVLYEETLPEVLILAKEEEVEPAGEI 173
KSG++ L+ A + VQ A LG LLCI GG +VQVLYEETLP +L+ A+++ ++ G +
Sbjct: 522 KSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPV 581
Query: 172 APVLKGYALAYMVIQC 125
+ L+GYA+A M+ C
Sbjct: 582 SSTLQGYAMANMLFYC 597
Score = 37.4 bits (85), Expect(5) = 5e-56
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 141 IW*YNVTSLPFTAAYPSRLGRAFVMHMEFLVRVMGGNARLGCDPAMW 1
+W + TS ++ SR R HM+F+ V+ G+ LGCDP W
Sbjct: 601 LWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTW 647
Score = 24.6 bits (52), Expect(5) = 5e-56
Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = -3
Query: 913 EMKEILASAGVQ-GSC 869
E+KEILASAGVQ SC
Sbjct: 330 EVKEILASAGVQINSC 345
Score = 23.5 bits (49), Expect(5) = 5e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 419 FISNIILCLVINWAQKM 369
F+S +IL VI WA K+
Sbjct: 493 FVSEVILKQVIEWAHKL 509