BLASTX nr result
ID: Ophiopogon25_contig00029631
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00029631
(911 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020252248.1| uncharacterized protein LOC109829595 [Aspara... 105 2e-39
ref|XP_020266417.1| uncharacterized protein LOC109841906 [Aspara... 112 1e-36
ref|XP_020253791.1| uncharacterized protein LOC109830842 [Aspara... 114 5e-35
ref|XP_020264999.1| uncharacterized protein LOC109840677 [Aspara... 107 4e-34
ref|XP_020253777.1| uncharacterized protein LOC109830826 [Aspara... 108 4e-33
ref|XP_020262172.1| uncharacterized protein LOC109838113 [Aspara... 103 4e-31
ref|XP_020262542.1| uncharacterized protein LOC109838519 [Aspara... 107 9e-30
dbj|BAH79979.1| putative unclassified retrotransposon protein [O... 89 1e-29
ref|XP_020086093.1| uncharacterized protein LOC109708688 [Ananas... 94 2e-29
ref|XP_020267043.1| uncharacterized protein LOC109842598 [Aspara... 102 4e-29
gb|OAY85076.1| Transposon TX1 uncharacterized 149 kDa protein [A... 92 5e-29
gb|OAY66433.1| LINE-1 retrotransposable element ORF2 protein [An... 91 5e-29
gb|ABA95227.1| retrotransposon protein, putative, unclassified [... 91 7e-29
dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica G... 91 7e-29
gb|ABA91325.1| retrotransposon protein, putative, unclassified [... 91 7e-29
gb|PNX71547.1| ribonuclease H [Trifolium pratense] 96 9e-29
gb|PNX77646.1| ribonuclease H, partial [Trifolium pratense] 95 9e-29
gb|ABE77191.1| putative non-LTR retroelement reverse transcripta... 90 3e-28
gb|AAN05341.1| Putative non-LTR retroelement reverse transcripta... 82 6e-28
gb|ABF94719.1| retrotransposon protein, putative, unclassified [... 82 6e-28
>ref|XP_020252248.1| uncharacterized protein LOC109829595 [Asparagus officinalis]
Length = 942
Score = 105 bits (261), Expect(3) = 2e-39
Identities = 54/110 (49%), Positives = 70/110 (63%)
Frame = -1
Query: 392 DWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKS 213
D PL+ K+E++L W G LSRGGRLVLVN VL SIP +W+S+ +WVI+KIDK
Sbjct: 583 DRSPLISKIEKRLALWKGNSLSRGGRLVLVNDVLSSIPTFWLSY--FLFPVWVIEKIDKM 640
Query: 212 WRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
R F W+ S + L + CK KK GGLG+ N+++ N LLGKWL
Sbjct: 641 RRRFLWSGSLEHKGCSNLVKWDEVCKPKKCGGLGVKNLKVMNKALLGKWL 690
Score = 71.2 bits (173), Expect(3) = 2e-39
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = -3
Query: 723 FAKMIKLDKCNNLIKGLG--NFENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSP 550
F KM+ L ++ I+GLG N + + LQY DDTL+F E FE +
Sbjct: 471 FTKMLNLAVESHFIEGLGPNNMRDKVHCLQYADDTLIFCKNNREQLTVLKLILYCFELAS 530
Query: 549 GLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
GL+I+F+ S I L +S Q G+ + NCK G F ++Y+ +PL+ +L
Sbjct: 531 GLQISFNKSVLIALENDESLQQGLATMMNCKSGSFPITYIGMPLRPGKL 579
Score = 36.6 bits (83), Expect(3) = 2e-39
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -2
Query: 787 KKGLRQGDPLSSLLFVLIAYAFCK 716
K+G+RQGDPLS LLFVL A +F K
Sbjct: 450 KRGVRQGDPLSPLLFVLAADSFTK 473
>ref|XP_020266417.1| uncharacterized protein LOC109841906 [Asparagus officinalis]
Length = 855
Score = 112 bits (281), Expect(3) = 1e-36
Identities = 55/111 (49%), Positives = 75/111 (67%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
SDW+P++D + +KL +W +CLS GGRLVL+NSVL SIP+Y+MSF K L WVIK++DK
Sbjct: 361 SDWQPMLDNMYRKLASWKSSCLSFGGRLVLLNSVLSSIPLYYMSFYK--LPSWVIKEVDK 418
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
+ F W + KCL + C SK +GGLG+ +++L N LL KWL
Sbjct: 419 IRKNFLWTGKNISKPFKCLVNWKTVCLSKYEGGLGVKDLKLFNNALLSKWL 469
Score = 48.9 bits (115), Expect(3) = 1e-36
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -3
Query: 726 LFAKMIKLDKCNNLIKGLGNFE--NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENS 553
+ KMI+ + L+ LG E N + SLQ+ DDTLLF+ + +FE+
Sbjct: 249 VLCKMIRHNVEEGLLSNLGIKEPLNQIRSLQFADDTLLFVRSTKNDISILKAILYIFEDI 308
Query: 552 PGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
L INFS S I+ + + NCK + YL +PLK +L
Sbjct: 309 SWLGINFSKSSLIYFGKLHNRGQVLASSMNCKLDYLPIKYLGLPLKYGKL 358
Score = 41.6 bits (96), Expect(3) = 1e-36
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIAYAFCK 716
NG S F CK+GL+QGD LS LLF ++A CK
Sbjct: 219 NGSPSKSFKCKRGLKQGDHLSPLLFNIVADVLCK 252
>ref|XP_020253791.1| uncharacterized protein LOC109830842 [Asparagus officinalis]
Length = 1301
Score = 114 bits (284), Expect(3) = 5e-35
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+DWEPL+D +KL W LS GGRLVL+NSVL SIP+Y+MSF K L WVI +IDK
Sbjct: 857 TDWEPLLDNFHKKLSTWKKNSLSYGGRLVLLNSVLTSIPLYFMSFYK--LPTWVIIEIDK 914
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
+ F W++S + SS KCL C SK +GGLG+ +IR+ N LL KWL
Sbjct: 915 IKKSFLWSESSQNSSFKCLVNWKKVCLSKSEGGLGVKDIRVFNCALLAKWL 965
Score = 43.9 bits (102), Expect(3) = 5e-35
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Frame = -3
Query: 711 IKLDKCNNLIKGLGNFENGLTS-------------LQYVDDTLLFLVTESEXXXXXXXXX 571
I +D N +I N E+GL S LQ+ DDTLLF+ + +
Sbjct: 741 IAVDALNKMIHN--NVEDGLLSNLGIKLPLNQLRILQFADDTLLFVRSSYKDISVLKTIL 798
Query: 570 XLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
+FE GL IN+S S ++ + + + CK G + YL +PL+ +L
Sbjct: 799 YIFEEVSGLGINYSKSSIVYFGKISTRGQYLSELLCCKIGTLPIKYLGLPLRYGKL 854
Score = 40.0 bits (92), Expect(3) = 5e-35
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIAYAFCK 716
NG+ S FSCK+GL+QGDPLS +LF + A K
Sbjct: 715 NGLPSKFFSCKRGLKQGDPLSPMLFNIAVDALNK 748
>ref|XP_020264999.1| uncharacterized protein LOC109840677 [Asparagus officinalis]
Length = 962
Score = 107 bits (267), Expect(3) = 4e-34
Identities = 53/111 (47%), Positives = 75/111 (67%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
SDW+P++D + +KL W LS GGRLVL+NSVL SIP+Y+MSF K L MW+IK+IDK
Sbjct: 518 SDWQPILDNLHRKLSTWRKHSLSFGGRLVLLNSVLSSIPLYFMSFYK--LPMWLIKEIDK 575
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
R F W + ++ KC+ C +K +GGLG+ ++++ N +LL KWL
Sbjct: 576 IRRNFLWTGNIDNNAFKCMVSWKRVCLTKTEGGLGVKDLKVFNSSLLAKWL 626
Score = 52.0 bits (123), Expect(3) = 4e-34
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -3
Query: 660 NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDG 481
N L +LQY DDTLLF+ + S +FE GL IN+S S ++ + +
Sbjct: 430 NQLRTLQYADDTLLFVRSSSNDIRILKTILYIFEEMSGLGINYSKSSLVYFGKTHLKEHS 489
Query: 480 IVYIFNCKKGKFSLSYLDIPLKDSRL 403
+ NCK + YL +PLK +L
Sbjct: 490 LASSLNCKVDHLPIKYLGLPLKYGKL 515
Score = 35.4 bits (80), Expect(3) = 4e-34
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLF 743
NG + F+CK+GL+QGDPLS +LF
Sbjct: 376 NGQPTKFFNCKRGLKQGDPLSPMLF 400
>ref|XP_020253777.1| uncharacterized protein LOC109830826 [Asparagus officinalis]
Length = 896
Score = 108 bits (270), Expect(3) = 4e-33
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
SDW+PL++ + KL +W CLS GGRLVL+NSVL SIP+Y+MSF K L W+IK++DK
Sbjct: 477 SDWQPLLNNLHHKLASWKCNCLSYGGRLVLLNSVLTSIPLYFMSFYK--LPGWLIKEVDK 534
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
R F W+ KCL C +K +GGLG+ +++ NI+LL KWL
Sbjct: 535 IRRNFLWSGKSVSKPFKCLVNWKRVCMNKLEGGLGVKDLKTFNISLLSKWL 585
Score = 43.5 bits (101), Expect(3) = 4e-33
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -3
Query: 726 LFAKMIKLDKCNNLIKGLGNFE--NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENS 553
+ ++MI + L+ L E N + LQ+ DDTLLF+ + + +FE+
Sbjct: 365 VLSRMIMYNVDEGLLSSLQIREPLNHIRILQFADDTLLFVRSTLKDISALKAILYIFEDI 424
Query: 552 PGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
GL IN+S S ++ + + NC+ + YL +PLK +L
Sbjct: 425 SGLGINYSKSSLLYFGNIQNRGLSLSSALNCRFDSLPIKYLGLPLKRGKL 474
Score = 39.3 bits (90), Expect(3) = 4e-33
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVL 737
NG S F+CK+GL+QGDPLS LLF L
Sbjct: 335 NGSPSKSFTCKRGLKQGDPLSPLLFNL 361
>ref|XP_020262172.1| uncharacterized protein LOC109838113 [Asparagus officinalis]
Length = 1087
Score = 103 bits (257), Expect(3) = 4e-31
Identities = 53/114 (46%), Positives = 70/114 (61%)
Frame = -1
Query: 392 DWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKS 213
+W+PL+D +KL W LS GGRL LVNSVL SIP+Y+ SF K L W+I +IDK
Sbjct: 661 EWQPLLDSFSKKLSLWKNKNLSIGGRLTLVNSVLSSIPLYYTSFFK--LPKWLIHEIDKL 718
Query: 212 WRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLETF 51
R F W + S KCL + C KK+GGLG+I++ + N LL KW+ + F
Sbjct: 719 RRNFLWNGNTNASKAKCLVAWKTVCLPKKEGGLGVIDLTVFNQALLSKWIWKIF 772
Score = 43.1 bits (100), Expect(3) = 4e-31
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = -3
Query: 660 NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDG 481
N + LQ+ DDT++F SE +F N GL++N + S +L +
Sbjct: 572 NNIRMLQFADDTIVFSRASSEDMNTLKAILLIFANISGLRVNSNKSYLYYLGRFPGRKHL 631
Query: 480 IVYIFNCKKGKFSLSYLDIPLKDSRL 403
+ +C G SYL +PLK L
Sbjct: 632 LARALSCSVGSLPFSYLGLPLKKGSL 657
Score = 38.1 bits (87), Expect(3) = 4e-31
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
NG + F C +GL+QGDPLS LLF+L+A
Sbjct: 518 NGSPTKFFHCHRGLKQGDPLSPLLFLLVA 546
>ref|XP_020262542.1| uncharacterized protein LOC109838519 [Asparagus officinalis]
Length = 856
Score = 107 bits (268), Expect(2) = 9e-30
Identities = 53/111 (47%), Positives = 74/111 (66%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
SDW+P++D + +KL +W +CLS GGRLVL+NSVL SI +Y+MSF K L WVIK++DK
Sbjct: 510 SDWQPMLDNMYRKLASWKSSCLSFGGRLVLLNSVLSSILLYYMSFYK--LPSWVIKEVDK 567
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
+ F W + KCL + C SK +GGLG+ ++++ N LL KWL
Sbjct: 568 IRKNFLWTGKNISRPFKCLANWKTVCLSKFEGGLGVKDLKIFNNALLSKWL 618
Score = 52.0 bits (123), Expect(2) = 9e-30
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = -3
Query: 717 KMIKLDKCNNLIKGLGNFE--NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGL 544
KMI+ + L+ LG E N + SLQ+ DDTLLF+ + +FE+ GL
Sbjct: 401 KMIRHNVEEGLLSNLGIKEPLNQIRSLQFADDTLLFVKSTKNDISILKAILYIFEDISGL 460
Query: 543 KINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
INFS S I+ + + NC + YL +PLK +L
Sbjct: 461 GINFSKSSLIYFGNLHNRGQTLAAAMNCNLDHLPIKYLGLPLKYGKL 507
>dbj|BAH79979.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 1283
Score = 89.0 bits (219), Expect(3) = 1e-29
Identities = 45/113 (39%), Positives = 70/113 (61%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+DW + ++ E++L +W G LS GGRL L+NSVL S+P+Y MSF + V+KK+D
Sbjct: 1128 ADWTGVEERFEKRLSSWKGKLLSTGGRLTLINSVLSSLPLYMMSF--FAIPRGVLKKLDY 1185
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLE 57
F+W D+ + + + C+ K+QGGLGI ++ ++NI LL KWL +
Sbjct: 1186 FRSRFYWQCDDQKKKYRLTKW-SIMCRPKEQGGLGIHDLDMKNIALLSKWLFK 1237
Score = 55.5 bits (132), Expect(3) = 1e-29
Identities = 30/87 (34%), Positives = 44/87 (50%)
Frame = -3
Query: 663 ENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQD 484
++G++ LQY DDT+LF+ + E FE GLKINF S + + +D
Sbjct: 1039 DDGISILQYADDTILFMDHDLEKACNMKLLLCAFEQLSGLKINFHKSELFCFGDARAMED 1098
Query: 483 GIVYIFNCKKGKFSLSYLDIPLKDSRL 403
+F C G+F L YL IP+ +L
Sbjct: 1099 QYTDLFGCSSGEFPLCYLGIPIHYRKL 1125
Score = 35.4 bits (80), Expect(3) = 1e-29
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
N +G F KKGLRQGDPLS +LF ++A
Sbjct: 987 NDVGPF-FQTKKGLRQGDPLSPMLFNIVA 1014
>ref|XP_020086093.1| uncharacterized protein LOC109708688 [Ananas comosus]
Length = 1589
Score = 94.0 bits (232), Expect(3) = 2e-29
Identities = 51/116 (43%), Positives = 72/116 (62%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+D+ PL++++ ++L W G LSRGGRL+L+NSVL SIP ++ S K L WV+ IDK
Sbjct: 1158 ADYMPLIERISKRLADWKGQTLSRGGRLILINSVLLSIPAFFCSLFK--LPTWVLNIIDK 1215
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLETFY 48
R FFW + +CL C+ KK GGLGI ++R+ N+ LL K +L FY
Sbjct: 1216 FRRHFFWRGRMLRNGFQCLVTWEHVCRPKKLGGLGIRSLRIMNLALLMK-VLWNFY 1270
Score = 45.4 bits (106), Expect(3) = 2e-29
Identities = 31/120 (25%), Positives = 52/120 (43%)
Frame = -3
Query: 762 LFHLYCLS*LHMLFAKMIKLDKCNNLIKGLGNFENGLTSLQYVDDTLLFLVTESEXXXXX 583
L + C+ L+ ++I++ L+ +G L +LQ+ DD ++F +
Sbjct: 1040 LLFILCVDVLY----RLIQIAVTEGLLPDVGIGNARLHTLQFADDLIIFFDGSTRSAAIV 1095
Query: 582 XXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
F GLKIN+S S +N D+ + C +F L+YL +PL RL
Sbjct: 1096 KLILDKFAGCSGLKINYSKSSVTPINLPDAQASSLATSLGCPVKEFPLNYLGLPLSPKRL 1155
Score = 39.7 bits (91), Expect(3) = 2e-29
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVL 737
NG F C++GLRQGDPLS LLF+L
Sbjct: 1018 NGTPGRSFPCRRGLRQGDPLSPLLFIL 1044
>ref|XP_020267043.1| uncharacterized protein LOC109842598 [Asparagus officinalis]
Length = 728
Score = 102 bits (254), Expect(3) = 4e-29
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = -1
Query: 392 DWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKS 213
+W+PL++ ++KL W LS GGRL L+NSVL SIP+Y+MSF K L WVI +DK
Sbjct: 267 EWQPLLESFKKKLSIWKNKTLSIGGRLTLLNSVLSSIPLYYMSFFK--LPKWVINAVDKI 324
Query: 212 WRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
R F W S S K + + CKSK++GGLG+I+I N LL KW+
Sbjct: 325 RRKFLWNGSHSFSRAKFIVNWGTVCKSKEEGGLGVIDIPSFNSALLSKWI 374
Score = 39.7 bits (91), Expect(3) = 4e-29
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
NG + F C KGL+QGDPLS LLF+L+A
Sbjct: 124 NGTPTSFFKCFKGLKQGDPLSPLLFLLVA 152
Score = 35.8 bits (81), Expect(3) = 4e-29
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = -3
Query: 660 NGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDG 481
N + ++Q+ DDT++F +F + GL N S +L +
Sbjct: 178 NSIRTIQFADDTIIFSRANPSDMVTLKTILSIFASISGLCANHQKSNLFYLGKIPQKGNS 237
Query: 480 IVYIFNCKKGKFSLSYLDIPLKDSRL 403
+ I C G SYL +PLK L
Sbjct: 238 MAEILGCTVGSLPFSYLGLPLKRGTL 263
>gb|OAY85076.1| Transposon TX1 uncharacterized 149 kDa protein [Ananas comosus]
Length = 1091
Score = 91.7 bits (226), Expect(3) = 5e-29
Identities = 50/111 (45%), Positives = 65/111 (58%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
SD+ PL++K++ +L W G LSRGGRLVL+NSVL SIP ++ S + L WV+ IDK
Sbjct: 696 SDYMPLIEKIDNRLAGWKGLNLSRGGRLVLLNSVLSSIPSHFCSIFR--LPGWVVNSIDK 753
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
R FFW + CL C+ K GGLGI N++ N LL K L
Sbjct: 754 IRRGFFWRGRKLTNGFHCLVNWGQVCRPKLWGGLGIRNLQAMNSALLMKGL 804
Score = 43.1 bits (100), Expect(3) = 5e-29
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVL 737
NG+ F+CK+GLRQGDPLS LLF+L
Sbjct: 556 NGVPGNSFTCKRGLRQGDPLSPLLFIL 582
Score = 42.7 bits (99), Expect(3) = 5e-29
Identities = 30/120 (25%), Positives = 52/120 (43%)
Frame = -3
Query: 762 LFHLYCLS*LHMLFAKMIKLDKCNNLIKGLGNFENGLTSLQYVDDTLLFLVTESEXXXXX 583
L + C+ L +F + + L++ G + + +LQ+ DD L+FL
Sbjct: 578 LLFILCVDALFRMFQRATS----SGLLQDPGIRDVRIQALQFADDLLIFLDGSPRSAAAS 633
Query: 582 XXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRL 403
F GL+IN+ S +N S++ + F C F ++YL +PL +RL
Sbjct: 634 KLILDNFAACSGLRINYDKSSISPINLSEAQATSLASSFGCTVKAFPITYLGLPLSPTRL 693
>gb|OAY66433.1| LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
Length = 673
Score = 91.3 bits (225), Expect(3) = 5e-29
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = -1
Query: 389 WEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKSW 210
W ++ K+++++ W LSRGGRL+LVN+VL ++P+Y++S K WVIK+I+
Sbjct: 397 WTEIIQKIQRRIEGWQAKLLSRGGRLILVNAVLTNLPLYFLSVFK--APKWVIKRIEALR 454
Query: 209 RVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKW 66
R FFW CL S C SK QGGLGI++I + N LL KW
Sbjct: 455 RDFFWNGVSNSLGKGCLVAWKSVCLSKIQGGLGILDIAIMNRALLIKW 502
Score = 52.4 bits (124), Expect(3) = 5e-29
Identities = 33/105 (31%), Positives = 47/105 (44%)
Frame = -3
Query: 720 AKMIKLDKCNNLIKGLGNFENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLK 541
AKM + NNL+KG+G + T+L VDDT LF + LFE + G+K
Sbjct: 287 AKMTNVATANNLLKGIGPSDESRTTLILVDDTFLFYEARKKYIKNHRLMWSLFEWASGMK 346
Query: 540 INFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSR 406
IN S ++ + + + CK G +YL PL R
Sbjct: 347 INREKSELYYIGQIEGRAARLANLLECKVGTLPTTYLGFPLSPRR 391
Score = 33.9 bits (76), Expect(3) = 5e-29
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIAYAFCK 716
NG + K+G+RQGDPLS LF+L+A K
Sbjct: 255 NGEPTNWIKTKRGVRQGDPLSPFLFLLVAECLAK 288
>gb|ABA95227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2776
Score = 90.5 bits (223), Expect(3) = 7e-29
Identities = 51/115 (44%), Positives = 69/115 (60%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+D +P+V KV+ L W + LS+ RL+LVN+VL S+P+Y MS K L VI+ IDK
Sbjct: 2269 NDLQPIVVKVDSFLTGWEASLLSQAERLILVNAVLSSVPVYAMSAFK--LPPKVIEAIDK 2326
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLETF 51
R FFW D S KCL + C +K++GGLGI +++ QN LL K L F
Sbjct: 2327 RRRAFFWTGDDTCSGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLF 2381
Score = 44.7 bits (104), Expect(3) = 7e-29
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -3
Query: 648 SLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYI 469
++QY DDTL+ E + F + GL+INF+ S I L+ S + + +
Sbjct: 2185 TIQYADDTLVICRAEEDDVLALRSTLLQFSKATGLQINFAKSTMISLHIDRSKESSLSEL 2244
Query: 468 FNCKKGKFSLSYLDIPLKDSRLVH 397
CK +SYL +PL +L +
Sbjct: 2245 LQCKLESLPMSYLGLPLSLHKLTN 2268
Score = 42.0 bits (97), Expect(3) = 7e-29
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
NGI +CKKGLRQGDPLS LF+L+A
Sbjct: 2132 NGIPGKWINCKKGLRQGDPLSPYLFILVA 2160
>dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica Group]
Length = 1197
Score = 90.5 bits (223), Expect(3) = 7e-29
Identities = 51/115 (44%), Positives = 69/115 (60%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+D +P+V KV+ L W + LS+ RL+LVN+VL S+P+Y MS K L VI+ IDK
Sbjct: 767 NDLQPIVVKVDSFLTGWEASLLSQAERLILVNAVLSSVPVYAMSAFK--LPPKVIEAIDK 824
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLETF 51
R FFW D S KCL + C +K++GGLGI +++ QN LL K L F
Sbjct: 825 RRRAFFWTGDDTCSGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLF 879
Score = 44.7 bits (104), Expect(3) = 7e-29
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -3
Query: 648 SLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYI 469
++QY DDTL+ E + F + GL+INF+ S I L+ S + + +
Sbjct: 683 TIQYADDTLVICRAEEDDVLALRSTLLQFSKATGLQINFAKSTMISLHIDRSKESSLSEL 742
Query: 468 FNCKKGKFSLSYLDIPLKDSRLVH 397
CK +SYL +PL +L +
Sbjct: 743 LQCKLESLPMSYLGLPLSLHKLTN 766
Score = 42.0 bits (97), Expect(3) = 7e-29
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
NGI +CKKGLRQGDPLS LF+L+A
Sbjct: 630 NGIPGKWINCKKGLRQGDPLSPYLFILVA 658
>gb|ABA91325.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 658
Score = 90.5 bits (223), Expect(3) = 7e-29
Identities = 51/115 (44%), Positives = 69/115 (60%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
+D +P+V KV+ L W + LS+ RL+LVN+VL S+P+Y MS K L VI+ IDK
Sbjct: 278 NDLQPIVVKVDSFLTGWEASLLSQAERLILVNAVLSSVPVYAMSAFK--LPPKVIEAIDK 335
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLLETF 51
R FFW D S KCL + C +K++GGLGI +++ QN LL K L F
Sbjct: 336 RRRAFFWTGDDTCSGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLF 390
Score = 44.7 bits (104), Expect(3) = 7e-29
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -3
Query: 648 SLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQDGIVYI 469
++QY DDTL+ E + F + GL+INF+ S I L+ S + + +
Sbjct: 194 TIQYADDTLVICRAEEDDVLALRSTLLQFSKATGLQINFAKSTMISLHIDRSKESSLSEL 253
Query: 468 FNCKKGKFSLSYLDIPLKDSRLVH 397
CK +SYL +PL +L +
Sbjct: 254 LQCKLESLPMSYLGLPLSLHKLTN 277
Score = 42.0 bits (97), Expect(3) = 7e-29
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIA 731
NGI +CKKGLRQGDPLS LF+L+A
Sbjct: 141 NGIPGKWINCKKGLRQGDPLSPYLFILVA 169
>gb|PNX71547.1| ribonuclease H [Trifolium pratense]
Length = 914
Score = 96.3 bits (238), Expect(3) = 9e-29
Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
S WEPLV+K+ +KL W +S GGRLVL+NSVL+SIPI+++SF K + + V+KK+ +
Sbjct: 566 STWEPLVEKIRRKLNMWRNKHISLGGRLVLINSVLNSIPIFYLSFMK--MPVQVMKKVTR 623
Query: 215 SWRVFFWA---DSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKW 66
R F W K+S +K C++KK GGLG+ N+++ NI+LL KW
Sbjct: 624 IQREFLWGGVNGGKKLSWVKW----KVVCQAKKNGGLGVRNLKVTNISLLMKW 672
Score = 47.0 bits (110), Expect(3) = 9e-29
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -3
Query: 690 NLIKGLGNFENG--LTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCS 517
NL KG G ++ LQY DDTL E FE + GL++NF SC
Sbjct: 466 NLFKGFSIRNGGPIISHLQYADDTLCIGEASVENLWTLKAILRGFELASGLRVNFWKSCL 525
Query: 516 IWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPL 418
+ +N D+ + NC +G YL +P+
Sbjct: 526 MGVNVGDNFMEVACNFLNCIQGGIPFKYLGLPV 558
Score = 33.5 bits (75), Expect(3) = 9e-29
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIAYAF 722
NG + + + ++GL+QGDPL+ LF+L+A F
Sbjct: 424 NGCPTGEVNIQRGLKQGDPLAPFLFLLVAEGF 455
>gb|PNX77646.1| ribonuclease H, partial [Trifolium pratense]
Length = 754
Score = 94.7 bits (234), Expect(3) = 9e-29
Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
S W+PLV+K+ +KL W +S GGRLVL+NSVL+SIPI+++SF K + + VIKK+ +
Sbjct: 390 STWDPLVEKIRRKLNTWGNKYISLGGRLVLINSVLNSIPIFYLSFMK--MPVQVIKKVTR 447
Query: 215 SWRVFFWA---DSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKW 66
R F W K+S +K C++KK GGLG+ ++++ NI+LL KW
Sbjct: 448 IQRDFLWGGVKGGKKLSWVKW----KVVCQAKKNGGLGVRDLKVTNISLLMKW 496
Score = 48.9 bits (115), Expect(3) = 9e-29
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -3
Query: 690 NLIKGLGNFENG--LTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCS 517
NL KG G ++ LQY DDTL + FE + GL++NF SC
Sbjct: 290 NLFKGFSIRRGGPTISHLQYADDTLCIGEASVDNLWTLKAILRGFELASGLRVNFWKSCL 349
Query: 516 IWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPL 418
I +N SD+ + NC +G YL +P+
Sbjct: 350 IGVNVSDNFMEVACNFLNCIRGGIPFKYLGLPV 382
Score = 33.1 bits (74), Expect(3) = 9e-29
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -2
Query: 817 NGIGSIKFSCKKGLRQGDPLSSLLFVLIAYAF 722
NG + + + ++GL+QGDPL+ LF+L+A F
Sbjct: 248 NGSPTGEVNIQRGLKQGDPLAPFLFLLVAEGF 279
>gb|ABE77191.1| putative non-LTR retroelement reverse transcriptase [Sorghum bicolor]
Length = 1505
Score = 89.7 bits (221), Expect(3) = 3e-28
Identities = 49/112 (43%), Positives = 67/112 (59%)
Frame = -1
Query: 395 SDWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDK 216
S+W + D+ +QKL W LS GGRLVL+NSVL S+P++ MSF + VIK +D
Sbjct: 1279 SEWSKVEDRFKQKLSCWKVKYLSYGGRLVLLNSVLSSLPMFMMSF--FEIPKGVIKNLDH 1336
Query: 215 SWRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWLL 60
FFW S + + + C+ K QGGLGI+N++LQN LL KWL+
Sbjct: 1337 YRSRFFWQGSSDKHKYRLAKW-DIICRPKDQGGLGILNLQLQNKCLLAKWLV 1387
Score = 52.0 bits (123), Expect(3) = 3e-28
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = -3
Query: 726 LFAKMIKLDKCNNLIKGL--GNFENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENS 553
+ A +I K + I+G+ ++GL+ LQY DDT++FL + E FE
Sbjct: 1167 MLALLINRAKADGQIRGVIPHLIDDGLSILQYADDTIIFLDHDPEQAKNLKLLLCAFEQL 1226
Query: 552 PGLKINFS*SCSIWLNGSDSCQDGIVYIFNCKKGKFSLSYLDIPLKDSRLVH 397
GLKINF S + + + C G++ YL IP+ +L++
Sbjct: 1227 SGLKINFHKSEIFCYGAAKEMESFYTNLLGCNAGEYPFCYLGIPMHHRQLLN 1278
Score = 33.1 bits (74), Expect(3) = 3e-28
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 796 FSCKKGLRQGDPLSSLLFVLIA 731
F K+GLRQGDP+S +LF ++A
Sbjct: 1144 FQTKRGLRQGDPMSPILFNIVA 1165
>gb|AAN05341.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 603
Score = 82.0 bits (201), Expect(3) = 6e-28
Identities = 43/110 (39%), Positives = 64/110 (58%)
Frame = -1
Query: 392 DWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKS 213
DW+ + ++ ++KL +W G CLS GGRLVL+NSVL S+ ++ +SF + ++KK+D
Sbjct: 217 DWQIIEERFQRKLSSWKGKCLSVGGRLVLINSVLSSLAMFMLSF--FEVPKGILKKLDYY 274
Query: 212 WRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
FFW + + + C K GGLGI N+ +QN LL KWL
Sbjct: 275 RSRFFWQSDGHKRKYRLARW-SVICTPKDCGGLGIQNLNVQNKCLLSKWL 323
Score = 56.2 bits (134), Expect(3) = 6e-28
Identities = 30/87 (34%), Positives = 43/87 (49%)
Frame = -3
Query: 663 ENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQD 484
+NGL+ LQY DDT+LF+ + + FE GLKINF S S ++
Sbjct: 127 DNGLSILQYADDTILFMEHDLDEVKNLKLVLSTFEKLAGLKINFHKSELFCYGKSKFAEN 186
Query: 483 GIVYIFNCKKGKFSLSYLDIPLKDSRL 403
V +F C+ G + YL IP+ +L
Sbjct: 187 EYVMLFGCRSGTYPFRYLGIPMHHKKL 213
Score = 35.8 bits (81), Expect(3) = 6e-28
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 796 FSCKKGLRQGDPLSSLLFVLIA 731
F KKGLRQGDPLS +LF L+A
Sbjct: 81 FQTKKGLRQGDPLSPILFNLVA 102
>gb|ABF94719.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 581
Score = 82.0 bits (201), Expect(3) = 6e-28
Identities = 43/110 (39%), Positives = 64/110 (58%)
Frame = -1
Query: 392 DWEPLVDKVEQKLPAWNGACLSRGGRLVLVNSVLHSIPIYWMSF*KKNLTMWVIKKIDKS 213
DW+ + ++ ++KL +W G CLS GGRLVL+NSVL S+ ++ +SF + ++KK+D
Sbjct: 217 DWQIIEERFQRKLSSWKGKCLSVGGRLVLINSVLSSLAMFMLSF--FEVPKGILKKLDYY 274
Query: 212 WRVFFWADSDKISSIKCLNY*NSTCKSKKQGGLGIINIRLQNITLLGKWL 63
FFW + + + C K GGLGI N+ +QN LL KWL
Sbjct: 275 RSRFFWQSDGHKRKYRLARW-SVICTPKDCGGLGIQNLNVQNKCLLSKWL 323
Score = 56.2 bits (134), Expect(3) = 6e-28
Identities = 30/87 (34%), Positives = 43/87 (49%)
Frame = -3
Query: 663 ENGLTSLQYVDDTLLFLVTESEXXXXXXXXXXLFENSPGLKINFS*SCSIWLNGSDSCQD 484
+NGL+ LQY DDT+LF+ + + FE GLKINF S S ++
Sbjct: 127 DNGLSILQYADDTILFMEHDLDEVKNLKLVLSTFEKLAGLKINFHKSELFCYGKSKFAEN 186
Query: 483 GIVYIFNCKKGKFSLSYLDIPLKDSRL 403
V +F C+ G + YL IP+ +L
Sbjct: 187 EYVMLFGCRSGTYPFRYLGIPMHHKKL 213
Score = 35.8 bits (81), Expect(3) = 6e-28
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 796 FSCKKGLRQGDPLSSLLFVLIA 731
F KKGLRQGDPLS +LF L+A
Sbjct: 81 FQTKKGLRQGDPLSPILFNLVA 102