BLASTX nr result

ID: Ophiopogon25_contig00029486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00029486
         (717 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268532.1| transcription factor GTE4-like [Asparagus of...   121   5e-28

>ref|XP_020268532.1| transcription factor GTE4-like [Asparagus officinalis]
 gb|ONK68903.1| uncharacterized protein A4U43_C05F17240 [Asparagus officinalis]
          Length = 519

 Score =  121 bits (303), Expect = 5e-28
 Identities = 72/153 (47%), Positives = 92/153 (60%), Gaps = 15/153 (9%)
 Frame = +2

Query: 302 LNGNCVVEGFEEEE-----------RAPAPDYCHLKGNGVIKSFEKEERLAPDYRHPNGN 448
           ++GN ++EGFEEEE             P  +Y HL GN VI+ F+       +Y H NGN
Sbjct: 1   MDGNGMIEGFEEEEPKNDGVVEVVNEEPMVNYGHLNGNRVIEGFD-------NYGHLNGN 53

Query: 449 GMIEGFETEERTPAPNYHHLNCNSVVLGFEKEER----MLNYRHVNGNGLIGCFAEEERT 616
           G+IEGF+        NY H N N V+ GF+ E++    +L Y H+NGNG+I  F  E+R 
Sbjct: 54  GLIEGFD--------NYGHPNGNGVIDGFQNEQQDGEPVLKYGHLNGNGVIEGFEREQRV 105

Query: 617 PKYRQLSVCVAPETNRGMIEGGFEKEKKRTPKA 715
           PKYR+LSV VAPE N  +I G FEKE KRTPKA
Sbjct: 106 PKYRKLSVSVAPEINSSLIGGVFEKE-KRTPKA 137


Top