BLASTX nr result

ID: Ophiopogon25_contig00029228 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00029228
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018681654.1| PREDICTED: ABC transporter C family member 9...    60   1e-07
ref|XP_010919852.1| PREDICTED: LOW QUALITY PROTEIN: putative ABC...    59   2e-07
ref|XP_008784678.1| PREDICTED: putative ABC transporter C family...    54   1e-05

>ref|XP_018681654.1| PREDICTED: ABC transporter C family member 9-like, partial [Musa
           acuminata subsp. malaccensis]
          Length = 1068

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 27/85 (31%), Positives = 44/85 (51%)
 Frame = -3

Query: 392 FIDSAGFQLLHYWQSLLQIKSPCLCEGISVFLHILLIGSFLVQYMWNEIRSVCRRKSTHK 213
           F   A FQ   +W+    I + C  + + VF+H++ IG F +Q +W  +  +CR +S   
Sbjct: 17  FRSPADFQSPQFWEGWKDISTLCFWKNLFVFVHLIFIGCFFLQLLWKILSKLCRMRSRTN 76

Query: 212 ENQAQNFPDAASRFDCISLSTSYKA 138
             + QN     +  +CI LS SY+A
Sbjct: 77  VEEMQNCTTDQNNLNCIRLSFSYQA 101


>ref|XP_010919852.1| PREDICTED: LOW QUALITY PROTEIN: putative ABC transporter C family
           member 15 [Elaeis guineensis]
          Length = 1525

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 44/84 (52%)
 Frame = -3

Query: 389 IDSAGFQLLHYWQSLLQIKSPCLCEGISVFLHILLIGSFLVQYMWNEIRSVCRRKSTHKE 210
           ++ + F LL +W+   QI S C  +G+ +FLH+  I SF  Q + N+I    RRK    E
Sbjct: 7   LNISNFHLLRHWKGWPQISSSCFWKGLFMFLHLFFISSFSFQLLLNKIYKSYRRKYRTNE 66

Query: 209 NQAQNFPDAASRFDCISLSTSYKA 138
              QN   A    D ISL  SY+A
Sbjct: 67  EGIQNCAAAKHTLDDISLGISYQA 90


>ref|XP_008784678.1| PREDICTED: putative ABC transporter C family member 15 [Phoenix
           dactylifera]
          Length = 1549

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/79 (36%), Positives = 41/79 (51%)
 Frame = -3

Query: 374 FQLLHYWQSLLQIKSPCLCEGISVFLHILLIGSFLVQYMWNEIRSVCRRKSTHKENQAQN 195
           F LL +W+   QI S C  + + +FLH+  I SF +Q + N+I    +RK    E   QN
Sbjct: 36  FHLLQHWKGWSQISSSCFWKSLVMFLHLFFISSFSLQLLLNKICKSYQRKYRTNEEGLQN 95

Query: 194 FPDAASRFDCISLSTSYKA 138
              A    D I+L  SY+A
Sbjct: 96  HAAAKHTLDDINLGISYQA 114


Top