BLASTX nr result

ID: Ophiopogon25_contig00029146 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00029146
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253500.1| recQ-mediated genome instability protein 1 i...   108   8e-25
ref|XP_020253496.1| recQ-mediated genome instability protein 1 i...   108   8e-25

>ref|XP_020253500.1| recQ-mediated genome instability protein 1 isoform X2 [Asparagus
           officinalis]
          Length = 664

 Score =  108 bits (269), Expect = 8e-25
 Identities = 61/122 (50%), Positives = 74/122 (60%)
 Frame = -2

Query: 370 NIAAVLAAQGIEGSIAEEFTALPQSDHIVEEPPPSSRTEVLAATFVSSRGIDEANAVEEY 191
           NIAA LAAQG+     EE  A   S HIV E  P    E++AATF SS G+ E N V +Y
Sbjct: 363 NIAAELAAQGLVERTTEEVIAPQSSAHIVNESSPLRSKEIIAATFASSSGVIEVNTVADY 422

Query: 190 DDTVVGLATNVELTAGSIGESIANVFVAPCVPGSDLEEPTSSSSLEIDSDTVTQTLPHVE 11
           DD  +G  TN EL A  + +S  N F      GS +EEPT+SS +EID  TVT++ PHVE
Sbjct: 423 DDPTIGFNTNKELNARGMNKSTVNEFGTSHHQGSGIEEPTTSSGMEIDPGTVTRS-PHVE 481

Query: 10  DT 5
           DT
Sbjct: 482 DT 483


>ref|XP_020253496.1| recQ-mediated genome instability protein 1 isoform X1 [Asparagus
           officinalis]
 ref|XP_020253497.1| recQ-mediated genome instability protein 1 isoform X1 [Asparagus
           officinalis]
 ref|XP_020253498.1| recQ-mediated genome instability protein 1 isoform X1 [Asparagus
           officinalis]
 ref|XP_020253499.1| recQ-mediated genome instability protein 1 isoform X1 [Asparagus
           officinalis]
 gb|ONK77828.1| uncharacterized protein A4U43_C02F11150 [Asparagus officinalis]
          Length = 670

 Score =  108 bits (269), Expect = 8e-25
 Identities = 61/122 (50%), Positives = 74/122 (60%)
 Frame = -2

Query: 370 NIAAVLAAQGIEGSIAEEFTALPQSDHIVEEPPPSSRTEVLAATFVSSRGIDEANAVEEY 191
           NIAA LAAQG+     EE  A   S HIV E  P    E++AATF SS G+ E N V +Y
Sbjct: 363 NIAAELAAQGLVERTTEEVIAPQSSAHIVNESSPLRSKEIIAATFASSSGVIEVNTVADY 422

Query: 190 DDTVVGLATNVELTAGSIGESIANVFVAPCVPGSDLEEPTSSSSLEIDSDTVTQTLPHVE 11
           DD  +G  TN EL A  + +S  N F      GS +EEPT+SS +EID  TVT++ PHVE
Sbjct: 423 DDPTIGFNTNKELNARGMNKSTVNEFGTSHHQGSGIEEPTTSSGMEIDPGTVTRS-PHVE 481

Query: 10  DT 5
           DT
Sbjct: 482 DT 483


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