BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00029085
         (747 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   204   3e-73
emb|CDP17738.1| unnamed protein product [Coffea canephora]            196   5e-70
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   195   3e-67
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...   194   7e-67
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   165   8e-62
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   165   8e-62
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        167   2e-61
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   165   2e-61
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   165   2e-61
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            167   5e-61
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   165   7e-61
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     165   7e-61
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   166   9e-61
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            166   9e-61
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             164   2e-60
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            164   2e-60
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     166   3e-60
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         167   4e-60
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        167   4e-60
emb|CDP17739.1| unnamed protein product [Coffea canephora]            197   3e-57

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  204 bits (518), Expect(2) = 3e-73
 Identities = 98/164 (59%), Positives = 123/164 (75%), Gaps = 4/164 (2%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT---DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKL 312
           NLY+ QGSTV G +AA+  +   D +A++LWHMRLGH                  K CKL
Sbjct: 330 NLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKL 389

Query: 311 EFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRRN 135
           EFCEHCVLGK+ +VKFGTAIH T+GILD VH+DVWGP  T S+GG +YFV+F+DD+SRR 
Sbjct: 390 EFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRV 449

Query: 134 WVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKSD 3
           WV+TMK+K++VLE+F++WK  VE  TGRKIK L++DNGGEYKSD
Sbjct: 450 WVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGEYKSD 493



 Score =  100 bits (249), Expect(2) = 3e-73
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F  F++++ GVV MGND  C   GIG+++++  DG  R + DVRYVP+LKKNL+SLG LE
Sbjct: 241 FFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALE 300

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
           S G  +TM +G+LK T G+LV++KGV +    Y
Sbjct: 301 SKGLVVTMRDGILKATLGALVMLKGVMKNNLYY 333


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  196 bits (499), Expect(2) = 5e-70
 Identities = 100/165 (60%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
 Frame = -2

Query: 482 NLYFLQGSTVTG----ALAASIDTDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCK 315
           NLY+ QGSTV G    A ++S   D +A++LWHMRLG                   K CK
Sbjct: 415 NLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCK 474

Query: 314 LEFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRR 138
           LEFCEHCVL K+ KVKFGT IH T+GILD VH+DVWGP  T SLGG  YFV+FIDD+SRR
Sbjct: 475 LEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRR 534

Query: 137 NWVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKSD 3
            WV+TMK K E+L++F++WK RVE QTGRKIK LR+DNGGEYKSD
Sbjct: 535 VWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGGEYKSD 579



 Score = 97.1 bits (240), Expect(2) = 5e-70
 Identities = 44/93 (47%), Positives = 67/93 (72%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F  FE+++ G V MGND  C   GIG+++++  DG  R ++DVRYVP LK++L+SLG+LE
Sbjct: 326 FFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLE 385

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
           S G ++ M +G+LKVT G+L+++KGV +    Y
Sbjct: 386 SKGLEVRMRDGILKVTSGALLMLKGVRKNNLYY 418


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  195 bits (496), Expect(2) = 3e-67
 Identities = 93/165 (56%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
 Frame = -2

Query: 488 DRNLYFLQGSTVTG--ALAASIDTDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCK 315
           +  LY+ QG+T+ G  A+A+S + + ++++LWHMRLGH                  + CK
Sbjct: 178 NNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACK 237

Query: 314 LEFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRR 138
           L+FCEHCV GKKT+VKFGTAIH T+GILD VH+DVWGP  T SL G +Y+V+F+DD+SRR
Sbjct: 238 LDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRR 297

Query: 137 NWVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKSD 3
            WVY MK K EVL +F++WKKR+E QTGRKIK  R+DNGGEY SD
Sbjct: 298 IWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGGEYTSD 342



 Score = 89.0 bits (219), Expect(2) = 3e-67
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F  F ++E GVV   ND      GIG++R+K  DG +R ++DVR+VP L +NL+S+G LE
Sbjct: 90  FYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALE 149

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G  +  E GV+K+  G+LVVMKGV +    Y
Sbjct: 150 EKGFTVHAEGGVMKIISGALVVMKGVRKNNRLY 182


>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score =  194 bits (493), Expect(2) = 7e-67
 Identities = 97/156 (62%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
 Frame = -2

Query: 467 QGSTVTGALAASIDTDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLEFCEHCVL 288
           +GST    +A +I ++ D S+LWH RLGHT                 K+ K+EFCEHCVL
Sbjct: 353 KGSTEISQVALAI-SEADISKLWHYRLGHTSENSLQILCKQRLLKGAKSGKIEFCEHCVL 411

Query: 287 GKKTKVKFGTAIHCTEGILDNVHTDVWG-PKNTSLGGANYFVSFIDDYSRRNWVYTMKHK 111
           GKKTKVKFGT+IH T GI+D +HTDVWG  KN SLGG ++FV+F+DDYSR  WVYTM  K
Sbjct: 412 GKKTKVKFGTSIHQTRGIMDYMHTDVWGLTKNVSLGGQHWFVTFVDDYSRHCWVYTMTKK 471

Query: 110 HEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKSD 3
            EVL++FVEWKKR+ELQTGRKIK LRSDNGGEY SD
Sbjct: 472 SEVLDIFVEWKKRLELQTGRKIKTLRSDNGGEYTSD 507



 Score = 89.0 bits (219), Expect(2) = 7e-67
 Identities = 42/69 (60%), Positives = 57/69 (82%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+SFEK++ GVV+MGNDQ C +  IGTVRI+M DGVVRE+++VR+VPQLKKN++S+G LE
Sbjct: 289 FASFEKVDGGVVVMGNDQFCSVCWIGTVRIRMHDGVVRELKEVRFVPQLKKNIISVGALE 348

Query: 565 SMGHKITME 539
           +   K + E
Sbjct: 349 AKRFKGSTE 357


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  165 bits (417), Expect(2) = 8e-62
 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASID-TDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLEF 306
           +LY LQGS VTG+ A S   +D+DA++LWHMRLGH                     KLEF
Sbjct: 97  SLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEF 156

Query: 305 CEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNWV 129
           CEHCV GK+ +V F TA H T+G LD +H+D+WGP K  S GG  Y ++ IDD+SR+ WV
Sbjct: 157 CEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWV 216

Query: 128 YTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEY 12
           Y ++HK+E    F +WK  VE QTG+K+KKLR+DNG E+
Sbjct: 217 YFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEF 255



 Score =  101 bits (251), Expect(2) = 8e-62
 Identities = 44/84 (52%), Positives = 67/84 (79%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F++ E ++SGVV+MGND  C + GIGT++IK  DG ++ + +VR++P LK+NL+SLG LE
Sbjct: 8   FTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLE 67

Query: 565 SMGHKITMENGVLKVTKGSLVVMK 494
           S+G K + E GVLKV+KG++V++K
Sbjct: 68  SLGCKYSAEGGVLKVSKGAIVLLK 91


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  165 bits (417), Expect(2) = 8e-62
 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASID-TDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLEF 306
           +LY LQGS VTG+ A S   +D+DA++LWHMRLGH                     KLEF
Sbjct: 393 SLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEF 452

Query: 305 CEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNWV 129
           CEHCV GK+ +V F TA H T+G LD +H+D+WGP K  S GG  Y ++ IDD+SR+ WV
Sbjct: 453 CEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWV 512

Query: 128 YTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEY 12
           Y ++HK+E    F +WK  VE QTG+K+KKLR+DNG E+
Sbjct: 513 YFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEF 551



 Score =  101 bits (251), Expect(2) = 8e-62
 Identities = 44/84 (52%), Positives = 67/84 (79%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F++ E ++SGVV+MGND  C + GIGT++IK  DG ++ + +VR++P LK+NL+SLG LE
Sbjct: 304 FTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLE 363

Query: 565 SMGHKITMENGVLKVTKGSLVVMK 494
           S+G K + E GVLKV+KG++V++K
Sbjct: 364 SLGCKYSAEGGVLKVSKGAIVLLK 387


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  167 bits (423), Expect(2) = 2e-61
 Identities = 81/162 (50%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY LQG+T+ G +A   D+  + DA+ LWHMRLGH                     KL+
Sbjct: 407 NLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLK 466

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ +DDYSR+ W
Sbjct: 467 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVW 526

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++   VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 527 PYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCS 568



 Score = 97.8 bits (242), Expect(2) = 2e-61
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 317 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 377 RKGYKYSGGDGILKVTKGSLVVMKASIKSANLY 409


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  165 bits (418), Expect(2) = 2e-61
 Identities = 83/164 (50%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
 Frame = -2

Query: 488  DRNLYFLQGSTVTGA--LAASIDTDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCK 315
            +R LYFL GS+VTG   +++S D D D ++LWHMRLGH                   T K
Sbjct: 891  ERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGK 950

Query: 314  LEFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRR 138
            L FCEHCV GK+T+VKF T IH T+G +D  H+D+WGP  T S GG  Y ++FIDDYSR+
Sbjct: 951  LNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRK 1010

Query: 137  NWVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
             WVY +K K+EVL  F ++K  +E QTG+KIK+ R+DNG E+ S
Sbjct: 1011 VWVYFLKSKYEVLINFKQFKALIENQTGKKIKRFRTDNGLEFCS 1054



 Score = 99.4 bits (246), Expect(2) = 2e-61
 Identities = 48/88 (54%), Positives = 66/88 (75%)
 Frame = -3

Query: 745  FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
            FS++EK  SG V+MGND +C + GIGTVRIKM DG+VR + DVR++P++KKNL+SL  L+
Sbjct: 805  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 863

Query: 565  SMGHKITMENGVLKVTKGSLVVMKGVTE 482
              G + + E GVLKV  G+L V++G  E
Sbjct: 864  KKGFRYSAEGGVLKVFSGALTVIRGNLE 891


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  165 bits (418), Expect(2) = 2e-61
 Identities = 83/164 (50%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
 Frame = -2

Query: 488  DRNLYFLQGSTVTGA--LAASIDTDEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCK 315
            +R LYFL GS+VTG   +++S D D D ++LWHMRLGH                   T K
Sbjct: 912  ERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGK 971

Query: 314  LEFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRR 138
            L FCEHCV GK+T+VKF T IH T+G +D  H+D+WGP  T S GG  Y ++FIDDYSR+
Sbjct: 972  LNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRK 1031

Query: 137  NWVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
             WVY +K K+EVL  F ++K  +E QTG+KIK+ R+DNG E+ S
Sbjct: 1032 VWVYFLKSKYEVLINFKQFKALIENQTGKKIKRFRTDNGLEFCS 1075



 Score = 99.4 bits (246), Expect(2) = 2e-61
 Identities = 48/88 (54%), Positives = 66/88 (75%)
 Frame = -3

Query: 745  FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
            FS++EK  SG V+MGND +C + GIGTVRIKM DG+VR + DVR++P++KKNL+SL  L+
Sbjct: 826  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 884

Query: 565  SMGHKITMENGVLKVTKGSLVVMKGVTE 482
              G + + E GVLKV  G+L V++G  E
Sbjct: 885  KKGFRYSAEGGVLKVFSGALTVIRGNLE 912


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  167 bits (423), Expect(2) = 5e-61
 Identities = 81/162 (50%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 373 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLK 432

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ +DDYSR+ W
Sbjct: 433 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVW 492

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 493 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 534



 Score = 96.3 bits (238), Expect(2) = 5e-61
 Identities = 44/93 (47%), Positives = 67/93 (72%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+S   L+
Sbjct: 283 FATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 343 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 375


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  165 bits (417), Expect(2) = 7e-61
 Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 442 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLK 501

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPK-NTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP   TS GGA Y ++ +DDYSR+ W
Sbjct: 502 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVW 561

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT +K+K LR+DNG E+ S
Sbjct: 562 PYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCS 603



 Score = 98.2 bits (243), Expect(2) = 7e-61
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 352 FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 412 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 444


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  165 bits (417), Expect(2) = 7e-61
 Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 442 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLK 501

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPK-NTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP   TS GGA Y ++ +DDYSR+ W
Sbjct: 502 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVW 561

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT +K+K LR+DNG E+ S
Sbjct: 562 PYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCS 603



 Score = 98.2 bits (243), Expect(2) = 7e-61
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 352 FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 412 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 444


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  166 bits (419), Expect(2) = 9e-61
 Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482  NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
            NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 614  NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLK 673

Query: 308  FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
            FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GG  Y ++ +DDYSR+ W
Sbjct: 674  FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVW 733

Query: 131  VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
             Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 734  PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 775



 Score = 97.1 bits (240), Expect(2) = 9e-61
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 524 FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 584 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 616


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  166 bits (419), Expect(2) = 9e-61
 Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 407 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLK 466

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GG  Y ++ +DDYSR+ W
Sbjct: 467 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVW 526

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 527 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 568



 Score = 97.1 bits (240), Expect(2) = 9e-61
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 317 FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 377 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 409


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  164 bits (416), Expect(2) = 2e-60
 Identities = 80/162 (49%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY LQG+T+ G +A   D+  + DA+ LWHMRLGH                     KL+
Sbjct: 392 NLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLK 451

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ ++DYSR+ W
Sbjct: 452 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVW 511

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++   VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 512 PYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCS 553



 Score = 97.4 bits (241), Expect(2) = 2e-60
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 302 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 362 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 394


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  164 bits (416), Expect(2) = 2e-60
 Identities = 80/162 (49%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY LQG+T+ G +A   D+  + DA+ LWHMRLGH                     KL+
Sbjct: 224 NLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLK 283

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ ++DYSR+ W
Sbjct: 284 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVW 343

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++   VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 344 PYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCS 385



 Score = 97.4 bits (241), Expect(2) = 2e-60
 Identities = 45/93 (48%), Positives = 68/93 (73%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 134 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 194 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 226


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  166 bits (419), Expect(2) = 3e-60
 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 3/159 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 316 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLK 375

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ +DDYSR+ W
Sbjct: 376 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVW 435

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGE 15
            Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E
Sbjct: 436 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGME 474



 Score = 95.5 bits (236), Expect(2) = 3e-60
 Identities = 44/84 (52%), Positives = 65/84 (77%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIGTV+IKM DG +R + DVR++P LK++L+SL  L+
Sbjct: 226 FATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285

Query: 565 SMGHKITMENGVLKVTKGSLVVMK 494
             G+K +  +G+LKVTKGSLVVMK
Sbjct: 286 RKGYKYSGGDGILKVTKGSLVVMK 309


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  167 bits (423), Expect(2) = 4e-60
 Identities = 81/162 (50%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 239 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLK 298

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ +DDYSR+ W
Sbjct: 299 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVW 358

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 359 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 400



 Score = 93.2 bits (230), Expect(2) = 4e-60
 Identities = 43/93 (46%), Positives = 66/93 (70%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIG V+IKM DG +  + DVR++P LK++L+SL  L+
Sbjct: 149 FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 209 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 241


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  167 bits (423), Expect(2) = 4e-60
 Identities = 81/162 (50%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
 Frame = -2

Query: 482 NLYFLQGSTVTGALAASIDT--DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKLE 309
           NLY L+G+T+ G +AA  D+  + DA+ LWHMRLGH                     KL+
Sbjct: 239 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLK 298

Query: 308 FCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGP-KNTSLGGANYFVSFIDDYSRRNW 132
           FCEHC+ GK  +VKF T+ H TEGILD VH+D+WGP + TS GGA Y ++ +DDYSR+ W
Sbjct: 299 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVW 358

Query: 131 VYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKS 6
            Y +KHK++  +VF EWK  VE QT RK+K LR+DNG E+ S
Sbjct: 359 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 400



 Score = 93.2 bits (230), Expect(2) = 4e-60
 Identities = 43/93 (46%), Positives = 66/93 (70%)
 Frame = -3

Query: 745 FSSFEKMESGVVIMGNDQSCHMEGIGTVRIKMGDGVVREIEDVRYVPQLKKNLLSLGVLE 566
           F+++E ++ G V+MG+D  C + GIG V+IKM DG +  + DVR++P LK++L+SL  L+
Sbjct: 149 FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 565 SMGHKITMENGVLKVTKGSLVVMKGVTETCTSY 467
             G+K +  +G+LKVTKGSLVVMK   ++   Y
Sbjct: 209 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 241


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  197 bits (501), Expect = 3e-57
 Identities = 100/164 (60%), Positives = 117/164 (71%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 LYFLQGSTVTGALAASIDT----DEDASRLWHMRLGHTXXXXXXXXXXXXXXXXXKTCKL 312
           LY+ QGS V G  AA+  +    D +A++LWHMRLGH                  K CKL
Sbjct: 24  LYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGEKSLQNLAKQGLLKGTKVCKL 83

Query: 311 EFCEHCVLGKKTKVKFGTAIHCTEGILDNVHTDVWGPKNT-SLGGANYFVSFIDDYSRRN 135
           EFCEHCVL K+ KVKFGT IH T+GILD VH++VWGP  T SLGG  YFV+FIDD+SRR 
Sbjct: 84  EFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRV 143

Query: 134 WVYTMKHKHEVLEVFVEWKKRVELQTGRKIKKLRSDNGGEYKSD 3
           WV+TMK K EVLE+F++WK RVE QTGRKIK LR+DNGGEYKSD
Sbjct: 144 WVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGGEYKSD 187