BLASTX nr result

ID: Ophiopogon25_contig00028822 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00028822
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245579.1| helicase-like transcription factor CHR28 iso...   101   3e-22
ref|XP_020245578.1| helicase-like transcription factor CHR28 iso...   101   3e-22
ref|XP_020245577.1| helicase-like transcription factor CHR28 iso...   101   3e-22
ref|XP_020245573.1| helicase-like transcription factor CHR28 iso...   101   3e-22
ref|XP_020245575.1| helicase-like transcription factor CHR28 iso...    77   1e-13

>ref|XP_020245579.1| helicase-like transcription factor CHR28 isoform X5 [Asparagus
           officinalis]
          Length = 964

 Score =  101 bits (251), Expect = 3e-22
 Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKLAEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SK +EHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245578.1| helicase-like transcription factor CHR28 isoform X4 [Asparagus
           officinalis]
          Length = 974

 Score =  101 bits (251), Expect = 3e-22
 Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKLAEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SK +EHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245577.1| helicase-like transcription factor CHR28 isoform X3 [Asparagus
           officinalis]
 gb|ONK58327.1| uncharacterized protein A4U43_C09F11060 [Asparagus officinalis]
          Length = 982

 Score =  101 bits (251), Expect = 3e-22
 Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKLAEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SK +EHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245573.1| helicase-like transcription factor CHR28 isoform X1 [Asparagus
           officinalis]
 ref|XP_020245574.1| helicase-like transcription factor CHR28 isoform X1 [Asparagus
           officinalis]
          Length = 996

 Score =  101 bits (251), Expect = 3e-22
 Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKLAEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SK +EHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245575.1| helicase-like transcription factor CHR28 isoform X2 [Asparagus
           officinalis]
          Length = 984

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKLAEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y E            S  SK +EHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHE------------SFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 137

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 138 NYSRKFDNKSFQNAQK 153


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