BLASTX nr result
ID: Ophiopogon25_contig00028684
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00028684
(1102 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 61 7e-23
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 61 6e-22
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116... 61 2e-21
emb|CDP17738.1| unnamed protein product [Coffea canephora] 60 4e-21
emb|CDP17739.1| unnamed protein product [Coffea canephora] 55 1e-14
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 60 2e-14
gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu... 76 6e-14
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 46 2e-13
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 46 2e-13
ref|XP_020250019.1| uncharacterized protein LOC109827417 [Aspara... 55 6e-13
ref|XP_017178258.1| PREDICTED: uncharacterized mitochondrial pro... 57 2e-12
ref|XP_018805769.1| PREDICTED: uncharacterized protein LOC108979... 63 3e-12
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote... 58 4e-12
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 49 1e-11
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 50 4e-11
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 50 4e-11
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 50 9e-11
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 50 9e-11
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 50 9e-11
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 50 9e-11
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 61.2 bits (147), Expect(3) = 7e-23
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRT 298
VLG + ++ GTA+HNT+GILDY+H+DVWGP KT S+ R+
Sbjct: 397 VLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGVRS 437
Score = 59.3 bits (142), Expect(3) = 7e-23
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 22/84 (26%)
Frame = -1
Query: 601 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSS---DEDITKP-HMR--------- 464
LK T G+LVM +G+ + NLYY +G+TV G +AAA SS D + TK HMR
Sbjct: 314 LKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSL 373
Query: 463 --------LRGEKTCIIDFCEHCI 416
L+G K C ++FCEHC+
Sbjct: 374 QIFTKQGLLKGTKACKLEFCEHCV 397
Score = 36.6 bits (83), Expect(3) = 7e-23
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -3
Query: 794 F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
F +LDGGVVYM ND+ C I ++K HD R L +VR
Sbjct: 245 FQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVR 285
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 60.8 bits (146), Expect(3) = 6e-22
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPR 301
VLG + ++ GTA+HNT+GILDY+H+DVWGP KT S+ R
Sbjct: 396 VLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGR 435
Score = 56.6 bits (135), Expect(3) = 6e-22
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 22/84 (26%)
Frame = -1
Query: 601 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSSDEDITKP----HMR--------- 464
LK T G+LVM +G+ + NLYY +G+TV G +AAA SS + + HMR
Sbjct: 313 LKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSL 372
Query: 463 --------LRGEKTCIIDFCEHCI 416
L+G K C ++FCEHC+
Sbjct: 373 QILTKQGLLKGTKACKLEFCEHCV 396
Score = 36.6 bits (83), Expect(3) = 6e-22
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -3
Query: 794 F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
F +LDGGVVYM ND+ C I ++K HD R L +VR
Sbjct: 244 FQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVR 284
>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
hassleriana]
Length = 209
Score = 61.2 bits (147), Expect(3) = 2e-21
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASV 310
VLG ++K+ GTA+HNT+GILDYIH+DVWGPT+ S+
Sbjct: 170 VLGKQSKVKFGTAIHNTEGILDYIHSDVWGPTRETSL 206
Score = 57.0 bits (136), Expect(3) = 2e-21
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 21/83 (25%)
Frame = -1
Query: 601 LKVTKGSLV-MRGIRERNLYYLKGNTVTGALAAAMSSDED--ITKP-HMR---------- 464
LKV G+LV ++G+R+ NLYY KG+TV G +A D+D +T+ HMR
Sbjct: 88 LKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDSEVTRLWHMRLGHPGEKALQ 147
Query: 463 -------LRGEKTCIIDFCEHCI 416
L+G + C ++FCEHC+
Sbjct: 148 NLVKQGVLKGARLCKLEFCEHCV 170
Score = 34.3 bits (77), Expect(3) = 2e-21
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -3
Query: 794 F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
F +LDGGVVYM N+ A I +++ HD R L EVR
Sbjct: 19 FEELDGGVVYMGNNDALQATGIGSIRLRCHDGTTRILTEVR 59
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 59.7 bits (143), Expect(3) = 4e-21
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 27/112 (24%)
Frame = -1
Query: 670 VPVLRKS----HFFGNSGVQRIQGNANLKVTKGSLVM-RGIRERNLYYLKGNTVTGALAA 506
VP L++S + G++ + LKVT G+L+M +G+R+ NLYY +G+TV G A
Sbjct: 371 VPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAV 430
Query: 505 AMSS----DEDITKP-HMR-----------------LRGEKTCIIDFCEHCI 416
A SS D + TK HMR L+G K C ++FCEHC+
Sbjct: 431 ATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCV 482
Score = 56.6 bits (135), Expect(3) = 4e-21
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPR 301
VL + K+ GT +HNT+GILDY+H+DVWGP KT S+ R
Sbjct: 482 VLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGR 521
Score = 35.0 bits (79), Expect(3) = 4e-21
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -3
Query: 794 F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCAGLEKESFL 642
F +LDGG VYM ND+ C I ++K HD R L +VR K S +
Sbjct: 329 FEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLI 379
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 54.7 bits (130), Expect(2) = 1e-14
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 23/85 (27%)
Frame = -1
Query: 601 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSS----DEDITKP-HMR-------- 464
LKVT G+LVM +G+R+ LYY +G+ V G AA SS D + TK HMR
Sbjct: 6 LKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGEKS 65
Query: 463 ---------LRGEKTCIIDFCEHCI 416
L+G K C ++FCEHC+
Sbjct: 66 LQNLAKQGLLKGTKVCKLEFCEHCV 90
Score = 54.7 bits (130), Expect(2) = 1e-14
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPR 301
VL + K+ GT +HNT+GILDY+H++VWGP KT S+ R
Sbjct: 90 VLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGR 129
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 59.7 bits (143), Expect(2) = 2e-14
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASV 310
V G K ++ GTA+H+T+GILDY+H+DVWGP+KTAS+
Sbjct: 245 VKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASL 281
Score = 49.3 bits (116), Expect(2) = 2e-14
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 22/84 (26%)
Frame = -1
Query: 601 LKVTKGSLV-MRGIRERN-LYYLKGNTVTGALAAAMSSDEDITKP---HMRL--RGEKT- 446
+K+ G+LV M+G+R+ N LYY +G T+ G A A S ++++ HMRL GE++
Sbjct: 162 MKIISGALVVMKGVRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSL 221
Query: 445 --------------CIIDFCEHCI 416
C +DFCEHC+
Sbjct: 222 NLLMKQGLLKNIQACKLDFCEHCV 245
>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
Length = 499
Score = 75.9 bits (185), Expect(2) = 6e-14
Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Frame = -1
Query: 919 NDFDESILSLSLTPTIYLADSTE*MFDPFATYHVCPHK*FYS-FKN*MVELSTWRMITHV 743
+D D S S ++ ADSTE M D A +H+ P + +++ FK EL
Sbjct: 164 SDLDSSGYSCPTLLSVCYADSTEWMLDSGAIFHIYPKRDWFTNFK----ELE-------- 211
Query: 742 L*KE*TR*RTGCMMRWLGS**R*DVPVLRKSHFFGNSGVQRI--------------QGNA 605
R DV ++ H SG+ + + +A
Sbjct: 212 ---------------------RGDVVLMGNDHVCPISGISSVRIRMLDEVTRELKEEEDA 250
Query: 604 NLKVTKGSLV-MRGIRERNLYYLKGNTVTGALAAAMSSDEDIT----------------- 479
LKV KGS+V MRG+RE NLYYLKG TVTG L A+++++ED T
Sbjct: 251 TLKVMKGSMVVMRGVRENNLYYLKGKTVTGGLTASITTEEDTTILWHLRLGYTGDKSLQL 310
Query: 478 -KPHMRLRGEKTCIIDFCEHCI 416
H L+G KTC ++ EHCI
Sbjct: 311 LAKHELLKGAKTCKMELSEHCI 332
Score = 31.2 bits (69), Expect(2) = 6e-14
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 432 SVNIVLGMKAKINLGTAVHNTQ 367
S + +LG K K+ GTA+HNTQ
Sbjct: 328 SEHCILGKKTKVKFGTAIHNTQ 349
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 45.8 bits (107), Expect(3) = 2e-13
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 21/83 (25%)
Frame = -1
Query: 601 LKVTKGSL-VMRGIRERNLYYLKGNTVTGALAAAMSS--DEDITKP-HMR---------- 464
LKV G+L V+RG ER LY+L G++VTG + S D D TK HMR
Sbjct: 876 LKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLS 935
Query: 463 -------LRGEKTCIIDFCEHCI 416
L G+ T ++FCEHC+
Sbjct: 936 VLSKRGLLSGQCTGKLNFCEHCV 958
Score = 44.7 bits (104), Expect(3) = 2e-13
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTAS 313
V G + ++ T +H T+G +DY H+D+WGP+ T S
Sbjct: 958 VFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTIS 993
Score = 34.3 bits (77), Expect(3) = 2e-13
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 776 GVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
G V M NDHAC + I T++ M D +VR L +VR
Sbjct: 813 GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVR 847
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 45.8 bits (107), Expect(3) = 2e-13
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 21/83 (25%)
Frame = -1
Query: 601 LKVTKGSL-VMRGIRERNLYYLKGNTVTGALAAAMSS--DEDITKP-HMR---------- 464
LKV G+L V+RG ER LY+L G++VTG + S D D TK HMR
Sbjct: 897 LKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLS 956
Query: 463 -------LRGEKTCIIDFCEHCI 416
L G+ T ++FCEHC+
Sbjct: 957 VLSKRGLLSGQCTGKLNFCEHCV 979
Score = 44.7 bits (104), Expect(3) = 2e-13
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTAS 313
V G + ++ T +H T+G +DY H+D+WGP+ T S
Sbjct: 979 VFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTIS 1014
Score = 34.3 bits (77), Expect(3) = 2e-13
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 776 GVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
G V M NDHAC + I T++ M D +VR L +VR
Sbjct: 834 GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVR 868
>ref|XP_020250019.1| uncharacterized protein LOC109827417 [Asparagus officinalis]
Length = 224
Score = 55.1 bits (131), Expect(4) = 6e-13
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -1
Query: 634 SGVQRIQGNANLKVTKGSLV-MRGIRERNLYYLKGNTVTGALAAAMSSDEDIT 479
SG + I NA LKVTK S+V MR +++ NLYYLKG T+T LAA ++++ED T
Sbjct: 170 SGYKVIMENATLKVTKESMVVMRDVQKNNLYYLKGKTITEGLAAYITTEEDST 222
Score = 35.4 bits (80), Expect(4) = 6e-13
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -3
Query: 779 GGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
G VV MENDH C + I T++ M D V R+L EV+
Sbjct: 117 GDVVLMENDHVCPISGIGTVRIRMCDGVTRELKEVK 152
Score = 28.5 bits (62), Expect(4) = 6e-13
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 862 DSTE*MFDPFATYHVCPHK*FYS 794
DSTE + D A YH+CP + ++S
Sbjct: 87 DSTEWILDSGAKYHICPRRDWFS 109
Score = 23.5 bits (49), Expect(4) = 6e-13
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 657 ERVISLGTLGSKGFKVM 607
+ +ISLGTL + G+KV+
Sbjct: 159 KNIISLGTLETSGYKVI 175
>ref|XP_017178258.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
[Malus domestica]
Length = 135
Score = 57.0 bits (136), Expect(2) = 2e-12
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 22/84 (26%)
Frame = -1
Query: 601 LKVTKGSLV-MRGIRERNLYYLKGNTVTGALAAAMSSDEDITKP----HMR--------- 464
LK G+LV M+GIR+ NLY+L+G+TV G A ++D D T HMR
Sbjct: 25 LKAVYGALVVMKGIRQNNLYFLQGSTVIGGAAVTEAADADSTDTTRLWHMRLGHAGEKAL 84
Query: 463 --------LRGEKTCIIDFCEHCI 416
L+G K C ++FCEHC+
Sbjct: 85 QGLVKQGLLKGAKACKLEFCEHCV 108
Score = 45.1 bits (105), Expect(2) = 2e-12
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDV 337
VLG + ++ GTA+H+T+GILDY+HTDV
Sbjct: 108 VLGKQTRVKFGTAIHHTKGILDYVHTDV 135
>ref|XP_018805769.1| PREDICTED: uncharacterized protein LOC108979531 [Juglans regia]
Length = 121
Score = 62.8 bits (151), Expect(2) = 3e-12
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2
Query: 426 NIVLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASV 310
N VLG + +I GTAVH+TQGILDY+H+D WGPTK AS+
Sbjct: 79 NCVLGKQTRIKFGTAVHSTQGILDYVHSDAWGPTKNASL 117
Score = 38.9 bits (89), Expect(2) = 3e-12
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 22/77 (28%)
Frame = -1
Query: 580 LVMRGIRERNLYYLKGNTVTGALAAAM----SSDEDITKP-HMR---------------- 464
+ M+G++ NLY+L+G+TV+G + +D+D T+ H+R
Sbjct: 5 VTMKGLKRGNLYFLQGSTVSGRASTVCEKLDETDDDTTRLWHIRMGHAGEKALQTLVKQG 64
Query: 463 -LRGEKTCIIDFCEHCI 416
L+G KT + FCE+C+
Sbjct: 65 LLKGAKTGKLSFCENCV 81
>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 285
Score = 58.2 bits (139), Expect(2) = 4e-12
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 23/96 (23%)
Frame = -1
Query: 634 SGVQRIQGNANLKVTKGSLV-MRGIRERNLYYLKGNTVTGALAAAMSSDEDITKP----H 470
+G + I N LKV +GSLV M+G+R RNLY L G TVTG LA ++ +D T+ H
Sbjct: 3 NGCKIILENGGLKVVRGSLVVMKGVRHRNLYTLMGETVTGDLAVGINRSKDQTECTRMWH 62
Query: 469 MRL------------------RGEKTCIIDFCEHCI 416
MRL EK C ++FCEHC+
Sbjct: 63 MRLGHMSEKGLSLLGEKGLLKNMEKPC-MEFCEHCV 97
Score = 42.7 bits (99), Expect(2) = 4e-12
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTAS 313
V G ++ ++ H ++GILDY+HTDVWGP S
Sbjct: 97 VYGKAHRLRFSSSKHKSRGILDYVHTDVWGPAPVTS 132
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 49.3 bits (116), Expect(3) = 1e-11
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASV 310
VLG + ++ H T+GILDY+H+DVWGPT+ AS+
Sbjct: 380 VLGKQCRVRFKPMKHKTEGILDYVHSDVWGPTREASM 416
Score = 41.6 bits (96), Expect(3) = 1e-11
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 20/82 (24%)
Frame = -1
Query: 601 LKVTKGSLVMRGIRER--NLYYLKGNTVTGALAAAMSSDEDITKP-HMR----------- 464
LKV+KG+L + ++ N+Y L GNTV G + A++ SD D TK H+R
Sbjct: 300 LKVSKGALTVMRVKRTAGNIYKLLGNTVVGDV-ASVESDNDATKLWHLRLGHLSERGMME 358
Query: 463 ------LRGEKTCIIDFCEHCI 416
L+G +C +D C++C+
Sbjct: 359 LHKRSLLKGVCSCKMDLCKYCV 380
Score = 28.1 bits (61), Expect(3) = 1e-11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 776 GVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVR 672
G VY+ +D AC + I +K M D VR L VR
Sbjct: 235 GFVYLGDDKACAITGIGQIKIAMDDGGVRTLTNVR 269
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 50.4 bits (119), Expect(2) = 4e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 487 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYMMTIVDDYSRK 539
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 540 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 572
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 22/95 (23%)
Frame = -1
Query: 634 SGVQRIQGNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPH 470
+G + G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + H
Sbjct: 393 AGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 452
Query: 469 MR-----------------LRGEKTCIIDFCEHCI 416
MR L G+ + FCEHCI
Sbjct: 453 MRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCI 487
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 50.4 bits (119), Expect(2) = 4e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 433 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYMMTIVDDYSRK 485
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 486 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 518
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 22/95 (23%)
Frame = -1
Query: 634 SGVQRIQGNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPH 470
+G + G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + H
Sbjct: 339 AGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 398
Query: 469 MR-----------------LRGEKTCIIDFCEHCI 416
MR L G+ + FCEHCI
Sbjct: 399 MRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCI 433
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 50.4 bits (119), Expect(2) = 9e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 381 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYMMTIVDDYSRK 433
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 434 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 466
Score = 45.8 bits (107), Expect(2) = 9e-11
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 22/88 (25%)
Frame = -1
Query: 613 GNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPHMR----- 464
G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + HMR
Sbjct: 294 GDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 353
Query: 463 ------------LRGEKTCIIDFCEHCI 416
L G+ + FCEHCI
Sbjct: 354 EIGLAELSKRGLLDGQSIGKLKFCEHCI 381
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 304 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYIMTIVDDYSRK 356
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 357 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 389
Score = 46.6 bits (109), Expect(2) = 9e-11
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 22/88 (25%)
Frame = -1
Query: 613 GNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPHMR----- 464
G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + HMR
Sbjct: 217 GDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 276
Query: 463 ------------LRGEKTCIIDFCEHCI 416
L G+ + FCEHCI
Sbjct: 277 EIGLAELSKRGLLDGQSIGKLKFCEHCI 304
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 304 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYIMTIVDDYSRK 356
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 357 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 389
Score = 46.6 bits (109), Expect(2) = 9e-11
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 22/88 (25%)
Frame = -1
Query: 613 GNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPHMR----- 464
G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + HMR
Sbjct: 217 GDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 276
Query: 463 ------------LRGEKTCIIDFCEHCI 416
L G+ + FCEHCI
Sbjct: 277 EIGLAELSKRGLLDGQSIGKLKFCEHCI 304
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 420 VLGMKAKINLGTAVHNTQGILDYIHTDVWGPTKTASVTPRTRRYGDAQRRAYILLEYRTY 241
+ G ++ T+ H T+GILDY+H+D+WGP + S +G A+ I+ +Y
Sbjct: 438 IFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTS-------FGGARYIMTIVDDYSRK 490
Query: 240 IR*AF--HKLQVRDILLHNKILKQESTHTVTEI 148
+ F HK Q D+ K + + T +I
Sbjct: 491 VWPYFLKHKYQAFDVFKEWKTMVERQTERKVKI 523
Score = 46.6 bits (109), Expect(2) = 9e-11
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 22/88 (25%)
Frame = -1
Query: 613 GNANLKVTKGSLVMR--GIRERNLYYLKGNTVTGALAA---AMSSDEDITKPHMR----- 464
G+ LKVTKGSLV+ I+ NLY+L+G T+ G +AA ++S+ + HMR
Sbjct: 351 GDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 410
Query: 463 ------------LRGEKTCIIDFCEHCI 416
L G+ + FCEHCI
Sbjct: 411 EIGLAELSKRGLLYGQSIGKLKFCEHCI 438