BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00027041
         (797 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX61216.1| putative TIR-NBS-LRR resistance protein, partial ...    65   2e-08
gb|PNX67372.1| cellular nucleic acid-binding protein, partial [T...    57   5e-07
emb|CCA29195.1| gag-pol polyprotein, partial [Small ruminant len...    59   1e-06
gb|AEF12565.1| gag protein, partial [Caprine arthritis encephali...    59   1e-06
emb|CBX25124.2| gag-pol polyprotein, partial [Small ruminant len...    59   1e-06
emb|CBX25122.2| gag-pol polyprotein, partial [Small ruminant len...    59   1e-06
emb|CBX25121.2| gag-pol polyprotein, partial [Small ruminant len...    59   1e-06
emb|CCA29194.1| gag-pol polyprotein, partial [Small ruminant len...    59   1e-06
gb|AEF12551.1| gag protein [Caprine arthritis encephalitis virus]      60   2e-06
emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant len...    58   2e-06
gb|AEF12567.1| gag protein, partial [Caprine arthritis encephali...    59   2e-06
ref|XP_018494305.1| PREDICTED: uncharacterized protein LOC108863...    59   2e-06
emb|CCA29192.1| gag-pol polyprotein, partial [Small ruminant len...    58   3e-06
gb|ABY53127.1| nucleocapsid, partial [Small ruminant lentivirus]       54   4e-06
gb|PNX86125.1| putative TIR-NBS-LRR resistance protein, partial ...    59   4e-06
ref|XP_021312000.1| uncharacterized protein LOC8057735 [Sorghum ...    59   5e-06
gb|AEF12564.1| gag protein, partial [Caprine arthritis encephali...    57   6e-06
gb|OAO14126.1| hypothetical protein AV274_4193 [Blastocystis sp....    57   6e-06
emb|CBX25125.2| gag-pol polyprotein, partial [Small ruminant len...    57   6e-06
emb|CCA29193.1| gag-pol polyprotein, partial [Small ruminant len...    56   9e-06

>gb|PNX61216.1| putative TIR-NBS-LRR resistance protein, partial [Trifolium
           pratense]
          Length = 322

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
 Frame = -3

Query: 294 TNPGCDSPPNDGGWTLVSYRKKNNHKTSHTPHRHTRSSPQKSPSSHPFFHPTKIFCYRCG 115
           + P   S    G  T    R +NN  +SH+ ++ TR +  +           K+ CY+CG
Sbjct: 189 SRPSHQSQNRGGRGTRPYNRPQNNRGSSHSGNQGTRGNQARD----------KLTCYKCG 238

Query: 114 DRGHMAQQCRN---GVLCNNCRRIGHYASTCRSPPRHPN 7
           + GH A  CRN    + C NC++ GHYA  CR+P   P+
Sbjct: 239 EEGHYASDCRNPEVAITCYNCQKPGHYARDCRAPKATPS 277


>gb|PNX67372.1| cellular nucleic acid-binding protein, partial [Trifolium pratense]
          Length = 79

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = -3

Query: 165 SSHPFFHPTKIF--CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRSP 22
           + H FF   K    CY+CGD GH A QC+ GV+C NC+  GH ++ C+ P
Sbjct: 23  TGHRFFECPKKDGRCYKCGDPGHKADQCKKGVICFNCKEPGHKSNVCKKP 72


>emb|CCA29195.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/51 (50%), Positives = 31/51 (60%)
 Frame = -3

Query: 180 PQKSPSSHPFFHPTKIFCYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCR 28
           PQK     P F   K  CY CG  GH+A+QCRNG++C+NC R GH    CR
Sbjct: 168 PQK-----PQFKGGKQKCYNCGKEGHIARQCRNGIICHNCGRRGHIQKECR 213


>gb|AEF12565.1| gag protein, partial [Caprine arthritis encephalitis virus]
          Length = 231

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC R GH    CRS
Sbjct: 195 CYNCGKEGHLAKQCRNGIICHNCGRRGHIQKDCRS 229


>emb|CBX25124.2| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC R GH    CRS
Sbjct: 180 CYNCGKEGHIAKQCRNGIICHNCGRRGHIQKDCRS 214


>emb|CBX25122.2| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC R GH    CRS
Sbjct: 180 CYNCGKAGHLARQCRNGIICHNCGRRGHIQKDCRS 214


>emb|CBX25121.2| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC R GH    CRS
Sbjct: 180 CYNCGKAGHLARQCRNGIICHNCGRRGHIQKDCRS 214


>emb|CCA29194.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNGV+C+NC R GH    CR+
Sbjct: 180 CYNCGKEGHLARQCRNGVICHNCGRRGHIQKNCRN 214


>gb|AEF12551.1| gag protein [Caprine arthritis encephalitis virus]
          Length = 441

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRSPPRHP 10
           CY CG  GH+A+QCRNG++C+NC + GH    CRS  + P
Sbjct: 383 CYNCGKEGHLARQCRNGIICHNCGKRGHIQKNCRSKKQGP 422


>emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GHMA+QCRNG++C+NC + GH    CR+
Sbjct: 180 CYNCGKEGHMARQCRNGIICHNCGKRGHIQKNCRN 214


>gb|AEF12567.1| gag protein, partial [Caprine arthritis encephalitis virus]
          Length = 255

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = -3

Query: 138 KIFCYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           K+ CY CG  GH+A+QCRNG++C+NC + GH    CRS
Sbjct: 209 KLKCYNCGKEGHIAKQCRNGIICHNCGKRGHIQKGCRS 246


>ref|XP_018494305.1| PREDICTED: uncharacterized protein LOC108863982 [Galendromus
           occidentalis]
          Length = 446

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = -3

Query: 270 PNDGGWTLVSYRKKNNHKTSHTPHRHTRSSPQKSPSSHPFFHPTKIFCYRCGDRGHMAQQ 91
           P + G   +S R K +H     P     S  +   S+    +   + CYRCGDR H+A  
Sbjct: 187 PKNSGINKLSSRSKQHHSNRFHPQNQGSSGSKPRNSTQ---NRANLDCYRCGDRNHLAPA 243

Query: 90  CR-NGVLCNNCRRIGHYASTCRSP 22
           C+   V CNNC  +GH    CR P
Sbjct: 244 CQYKSVTCNNCGLVGHLTRACRKP 267


>emb|CCA29192.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC + GH    CRS
Sbjct: 180 CYNCGKEGHLARQCRNGIICHNCGKRGHIQKECRS 214


>gb|ABY53127.1| nucleocapsid, partial [Small ruminant lentivirus]
          Length = 55

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRSPPRHPN 7
           CY CG  GH A+QCR G++C+NC + GH    CR   +  N
Sbjct: 15  CYNCGKAGHRARQCRQGIICHNCGKRGHMQKDCRGKKQQGN 55


>gb|PNX86125.1| putative TIR-NBS-LRR resistance protein, partial [Trifolium
           pratense]
          Length = 436

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = -3

Query: 261 GGWTLVSYRKKNNHKTSHTPHRHTRSSPQKSPSSHPFFHPT-KIFCYRCGDRGHMAQQCR 85
           GG +  S + +N  +  + P+   +++   + S++       K  C++CG+ GH A +CR
Sbjct: 246 GGPSRPSDQNQNRGRQGNKPYNRPQNNRGPNRSANQGSQTRGKQACFKCGEEGHYANECR 305

Query: 84  -NGVLCNNCRRIGHYASTCRSPPRHPNIH 1
             G+ C+NC++ GHYA  C++P   P+++
Sbjct: 306 IQGLTCHNCQKSGHYARDCKAPKAEPSVN 334


>ref|XP_021312000.1| uncharacterized protein LOC8057735 [Sorghum bicolor]
          Length = 853

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 47/156 (30%), Positives = 57/156 (36%), Gaps = 2/156 (1%)
 Frame = -3

Query: 483 RCSPPPLKISYPLQTPPPRSILRPCTXXXXXXXXXXXXXXXXXXXSHKALCSSQTPSAAS 304
           R S PP +  Y    PP R   RPC                              PS   
Sbjct: 102 RVSLPPHRRHY--SPPPKRHNPRPCCRSATTAAPGSGSAIKSASAISGTNIDELVPSQCR 159

Query: 303 VTATNPGCDSPPNDGGWTLVSYRKKNNHKTSHTPHRHTRSSPQKSPSSH--PFFHPTKIF 130
              T   C    ++ GW+ V   K    +   TPHR      + +P +H  P     +  
Sbjct: 160 -RDTTANCSDGLDEKGWSTVR-PKYWWRRGEFTPHRR-----RPTPCAHHLPMARTLQGK 212

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRSP 22
           C RC  +GH A  CR  V C NC R GH A TCRSP
Sbjct: 213 CLRCLGKGHSAASCREPVRCINCGRFGHEAQTCRSP 248


>gb|AEF12564.1| gag protein, partial [Caprine arthritis encephalitis virus]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -3

Query: 156 PFFHPTKIFCYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           P F   +  CY CG  GH+A+QCRNG++C+NC + GH    C+S
Sbjct: 186 PQFKGGRQKCYNCGKEGHLAKQCRNGIICHNCGKRGHVQKDCKS 229


>gb|OAO14126.1| hypothetical protein AV274_4193 [Blastocystis sp. ATCC 50177/Nand
           II]
          Length = 205

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/100 (32%), Positives = 46/100 (46%)
 Frame = -3

Query: 318 PSAASVTATNPGCDSPPNDGGWTLVSYRKKNNHKTSHTPHRHTRSSPQKSPSSHPFFHPT 139
           P+AA   A  P  + P             +N HK  H      R  P++ P     F P 
Sbjct: 85  PAAAPADAAAPTAEKP---------EVICRNCHKPGHI----ARDCPERKPRRR--FGPR 129

Query: 138 KIFCYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRSPP 19
            + C+RC   GH+A+ C+N V+CN C + GH A  C++ P
Sbjct: 130 NL-CFRCLQPGHIARDCKNDVVCNRCEQPGHIARDCKNEP 168


>emb|CBX25125.2| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC + GH    CR+
Sbjct: 180 CYNCGKEGHIARQCRNGIICHNCGKRGHIQKNCRN 214


>emb|CCA29193.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -3

Query: 129 CYRCGDRGHMAQQCRNGVLCNNCRRIGHYASTCRS 25
           CY CG  GH+A+QCRNG++C+NC + GH    CR+
Sbjct: 180 CYNCGKEGHIAKQCRNGIICHNCGKRGHIQKDCRN 214