BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00026896
         (1654 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subc...   660   0.0  
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   677   0.0  
gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [...   661   0.0  
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   677   0.0  
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   677   0.0  
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   677   0.0  
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         677   0.0  
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        677   0.0  
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         677   0.0  
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         676   0.0  
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]     674   0.0  
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   673   0.0  
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         676   0.0  
gb|AAS01934.1| putative Integrase core domain containing protein...   671   0.0  
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     677   0.0  
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc...   671   0.0  
gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subc...   672   0.0  
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   665   0.0  
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   670   0.0  
gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group...   663   0.0  

>gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 591

 Score =  660 bits (1702), Expect = 0.0
 Identities = 309/522 (59%), Positives = 414/522 (79%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WK+A+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 69   DDFIVYLVDDTPKSISEAYASPDADYWKKAVRSEMDSIITNGTWEVTERPYGCKPVGCKW 128

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 129  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 188

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L E+IYMDQP+ F+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 189  QMDVKTAFLNGELDEKIYMDQPDAFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 248

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VI CLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 249  SAGFAVNEVDKCVYYRYGGGEGVIPCLYVDDILIFGTNLRVINEVKSFLSQNFDMKDLGV 308

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG    QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 309  ADVILNIKLIRGENGITHLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 368

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +LT+ TRPDI++AV++LS +TSN    HW  LER++RYLKGT+  GLHY+
Sbjct: 369  EYSQIIGSLMYLTSVTRPDISFAVSKLSLFTSNLGDDHWRVLERVMRYLKGTMELGLHYT 428

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+V  LGGGAVSW+  KQT++ RSTME E+ ALDT
Sbjct: 429  GYPAVLEGYSDSNWISDVDEIKATSGYVLTLGGGAVSWRFCKQTILTRSTMEVELTALDT 488

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             +IEAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 489  ATIEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 548

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSRTV+ ++S+ MGL P
Sbjct: 549  LKNSRVITLDYIQTARNLADPFTKGLSRTVIDKASKEMGLRP 590


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  677 bits (1748), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 573  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 632

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 633  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 692

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 693  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 752

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 753  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 812

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 813  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 872

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 873  EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 932

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 933  GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 992

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 993  ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1052

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1053 LRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1094


>gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
          Length = 804

 Score =  661 bits (1706), Expect = 0.0
 Identities = 305/523 (58%), Positives = 415/523 (79%), Gaps = 1/523 (0%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +D+   LV+D+P + E+A  S D+ +WKEA+ +E+ SI+ N TWE+ + P GCK +GCKW
Sbjct: 281  DDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVEHPYGCKPVGCKW 340

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL+ALA+ H L++H
Sbjct: 341  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVH 400

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+G+++ GQE  VCKL++SLYGLKQAPKQWH KFD  + 
Sbjct: 401  QMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLT 460

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+ + +I ++K +LS++F+MKDLGE
Sbjct: 461  SAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGE 520

Query: 916  AELILNTKILRKNNGYV-LSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQ 740
            A++ILN K+ R + G + L QSHY++K+L  F    C+P  TPYDPN  L+KN      Q
Sbjct: 521  ADVILNIKLQRGDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPNVLLRKNRRIARDQ 580

Query: 739  REYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHY 560
              Y+QIIGSL +L + TRPDI++AV++LSR+ SNP   HW ALER++RYLKGT++YG+HY
Sbjct: 581  LRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHY 640

Query: 559  SGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALD 380
            +GYP VLEGYSD+NWISD+ ++K+ +G+ F LGGGAVSWKS KQT++ RSTME+E+ ALD
Sbjct: 641  TGYPKVLEGYSDSNWISDANEIKAISGYAFTLGGGAVSWKSCKQTILTRSTMEAELTALD 700

Query: 379  TTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLR 200
            T ++EAEWL++L++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R
Sbjct: 701  TATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHIKRRLKSVR 760

Query: 199  YKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
             +  + +IALD+V++ +NLAD  TKGL R V+  +SR MGL P
Sbjct: 761  KQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 803


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  677 bits (1748), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF++ GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG++I++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  677 bits (1747), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  677 bits (1746), Expect = 0.0
 Identities = 315/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF++ GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  677 bits (1747), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  677 bits (1746), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 752  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTEQPYGCKPVGCKW 811

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 812  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 871

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 872  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 931

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 932  SAGFGVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 991

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 992  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1051

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1052 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1111

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1112 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1171

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1172 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1231

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1232 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1273


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  677 bits (1748), Expect = 0.0
 Identities = 317/524 (60%), Positives = 420/524 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N  WE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGIWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSP+AR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPIARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G K VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALERI+RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERIMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSPQE 65
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P E
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIE 1303


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  676 bits (1744), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEAI +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAICSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ ++
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLI 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  G HY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGFHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1229

 Score =  674 bits (1738), Expect = 0.0
 Identities = 314/522 (60%), Positives = 418/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 707  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 766

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTI VL++LA+ H L++H
Sbjct: 767  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLLSLAASHGLVVH 826

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 827  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 886

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FL QNFDMKDLG 
Sbjct: 887  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLPQNFDMKDLGV 946

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 947  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1006

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1007 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1066

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1067 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1126

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1127 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1186

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1187 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1228


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99553.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1224

 Score =  673 bits (1737), Expect = 0.0
 Identities = 316/522 (60%), Positives = 417/522 (79%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GC+ +GCKW
Sbjct: 702  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCQPVGCKW 761

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 762  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 821

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+I+ 
Sbjct: 822  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKILT 881

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 882  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 941

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L KN      Q 
Sbjct: 942  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARNQL 1001

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1002 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1061

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD   +K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1062 GYPAVLEGYSDSNWISDVDKIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1121

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD +  I K +    N+K +RH+K R KS+R 
Sbjct: 1122 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQMVIVKVNSSKDNMKSSRHVKRRLKSVRK 1181

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+   S+ MGL P
Sbjct: 1182 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNVSKEMGLRP 1223


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  676 bits (1743), Expect = 0.0
 Identities = 315/522 (60%), Positives = 419/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 780  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 839

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 840  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 899

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 900  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 959

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 960  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1019

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1020 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1079

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW  LER++RYLKGT+  GLHY+
Sbjct: 1080 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYT 1139

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1140 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1199

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1200 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1259

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1260 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  671 bits (1731), Expect = 0.0
 Identities = 314/522 (60%), Positives = 416/522 (79%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 658  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 717

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 718  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 777

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+   
Sbjct: 778  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFT 837

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 838  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 897

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 898  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQL 957

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++ V++LSR+TSNP   HW ALER++ YLKGT+  GLHY+
Sbjct: 958  EYSQIIGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYT 1017

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME E+ ALDT
Sbjct: 1018 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDT 1077

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1078 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1137

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1138 LRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1179


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  677 bits (1747), Expect = 0.0
 Identities = 316/522 (60%), Positives = 420/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 869  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 928

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 929  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 988

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 989  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 1048

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 1049 SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 1108

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 1109 ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1168

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1169 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1228

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1229 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1288

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1289 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1348

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1349 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1390


>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  671 bits (1731), Expect = 0.0
 Identities = 314/522 (60%), Positives = 416/522 (79%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 675  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 734

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 735  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 794

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+   
Sbjct: 795  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFT 854

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 855  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 914

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 915  ADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIAGNQL 974

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++ V++LSR+TSNP   HW ALER++ YLKGT+  GLHY+
Sbjct: 975  EYSQIIGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERVMCYLKGTVELGLHYT 1034

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME E+ ALDT
Sbjct: 1035 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDT 1094

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1095 ATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1154

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1155 LRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1196


>gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1243

 Score =  672 bits (1734), Expect = 0.0
 Identities = 316/522 (60%), Positives = 418/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S   A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 721  DDFTVYLVDDTPKSISKAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 780

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 781  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 840

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 841  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 900

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++Q+IN++K FLSQNFDMKDLG 
Sbjct: 901  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLQVINEVKSFLSQNFDMKDLGV 960

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 961  ADVILNIKLIRGENGINLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1020

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1021 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVIRYLKGTVELGLHYT 1080

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEG+SD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1081 GYPAVLEGHSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1140

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL+++ P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1141 ATVEAEWLRDLLMDQPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1200

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1201 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1242


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  665 bits (1716), Expect = 0.0
 Identities = 306/523 (58%), Positives = 417/523 (79%), Gaps = 1/523 (0%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +D+   LV+D+P + E+A  S D+ +WKEA+ +E+ SI+ N TWE  + P GCK +GCKW
Sbjct: 505  DDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEFVERPYGCKPVGCKW 564

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL+ALA+ H L++H
Sbjct: 565  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVH 624

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+G+++ GQE  VCKL++SLYGLKQAPKQWH KFD  + 
Sbjct: 625  QMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLT 684

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+ + +I ++K +LS++F+MKDLGE
Sbjct: 685  SAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGE 744

Query: 916  AELILNTKILRKNNGYV-LSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQ 740
            A++ILN K+ R + G + L QSHY++K+L  F    C+P  TPYDP+  L+KN      Q
Sbjct: 745  ADVILNIKLQRGDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQ 804

Query: 739  REYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHY 560
              Y+QIIGSL +L + TRPDI++AV++LSR+ SNP+  HW ALER++RYLKGT++YG+HY
Sbjct: 805  LRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNPEDDHWQALERVMRYLKGTMSYGIHY 864

Query: 559  SGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALD 380
            +GYP VLEGYSD+NWISD+ ++K+T+G+VF LGGGAVSWKS KQT++ RSTME+E+ ALD
Sbjct: 865  TGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 924

Query: 379  TTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLR 200
            T ++EAEWL++L++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R
Sbjct: 925  TATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHIKRRLKSVR 984

Query: 199  YKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
             +  + +IALD+V++ +NLAD  TKGL R V+  +SR MGL P
Sbjct: 985  KQKNSEVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 1027


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  670 bits (1729), Expect = 0.0
 Identities = 313/522 (59%), Positives = 418/522 (80%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 713  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 772

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKA+LVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 773  VFKKKLRPDGTIEKYKAQLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 832

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKTAFLNG+L EEIYMDQP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 833  QMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 892

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 893  SAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 952

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  N   L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 953  ADVILNIKLIRGENEITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQL 1012

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER++RYLKGT+  GLHY+
Sbjct: 1013 EYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYT 1072

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT++ RSTME+E+ ALDT
Sbjct: 1073 GYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDT 1132

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++ +P+VEKP+PAI ++CD ++ I K +    N+K +RH+K R KS+R 
Sbjct: 1133 ATVEAEWLRDLLMNLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRK 1192

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  T+GLSR V+  +S+ MGL P
Sbjct: 1193 LRNSGVITLDYIQTARNLADPFTEGLSRNVIDNASKEMGLRP 1234


>gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAV44157.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1046

 Score =  663 bits (1711), Expect = 0.0
 Identities = 308/522 (59%), Positives = 415/522 (79%)
 Frame = -1

Query: 1636 EDFYALLVEDSPTSFEDAMKSVDSPFWKEAINNEIQSIVQNQTWELTDLPPGCKTIGCKW 1457
            +DF   LV+D+P S  +A  S D+ +WKEA+ +E+ SI+ N TWE+T+ P GCK +GCKW
Sbjct: 524  DDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKW 583

Query: 1456 VFKKKLRPDGTVDKYKARLVAKGFTQKSGIDYFDVYSPVARITTIRVLVALASIHKLIIH 1277
            VFKKKLRPDGT++KYKARLVAKG+TQK G D+FD YSPVAR+TTIRVL++LA+ H L++H
Sbjct: 584  VFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVH 643

Query: 1276 QMDVKTAFLNGDLHEEIYMDQPEGFIVSGQEHKVCKLIRSLYGLKQAPKQWHMKFDEIIL 1097
            QMDVKT FLNG+L E+IYM+QP+GF+V GQE KVCKL++SLYGLKQAPKQWH KFD+ + 
Sbjct: 644  QMDVKTTFLNGELDEDIYMNQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLT 703

Query: 1096 SYGFEINQTDECVYHKIDGVKIVILCLYVDDILIFGSDIQIINDIKHFLSQNFDMKDLGE 917
            S GF +N+ D+CVY+   G + VI CLYVDDILIFG+++++IN++K FLSQNFDMKDLG 
Sbjct: 704  SAGFAVNEVDKCVYYHHGGGEGVIPCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGV 763

Query: 916  AELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDPNTHLKKNTGHPVLQR 737
            A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP+  L+KN      Q 
Sbjct: 764  ADVILNMKLIRSENGITLLQSHYVEKILNRFGYIDNKPSPTPYDPSLLLRKNKRIARNQL 823

Query: 736  EYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERILRYLKGTLTYGLHYS 557
            +Y+QIIGSL +L + TRPDI++A+++LSR+TSNP   HW ALER++RYLKGT+  G HYS
Sbjct: 824  QYSQIIGSLMYLASATRPDISFAMSKLSRFTSNPGDDHWRALERVMRYLKGTMELGFHYS 883

Query: 556  GYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTVMARSTMESEMIALDT 377
            GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S  QT++ RSTME+E+ ALDT
Sbjct: 884  GYPTVLEGYSDSNWISDMDEIKATSGYVFTLGGGAVSWRSCNQTILTRSTMEAELTALDT 943

Query: 376  TSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANVKMNRHLKVRHKSLRY 197
             ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+K +RH+K + KS+R 
Sbjct: 944  ATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVILKVNSSKDNMKSSRHVKRQVKSVRK 1003

Query: 196  KMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 71
               + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1004 LRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1045