BLASTX nr result

ID: Ophiopogon25_contig00026522 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00026522
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019053451.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...    53   1e-05

>ref|XP_019053451.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X2
           [Nelumbo nucifera]
          Length = 219

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = +2

Query: 176 YIVLFQSREVNAASSSLQGITSL-SRVELDSSISDSYRAPPRPLP 307
           Y  LFQ  EV+A  SS+QG TSL S   LD+S+ D YR+PPRPLP
Sbjct: 39  YTALFQRGEVHALPSSIQGATSLTSSASLDNSLCDMYRSPPRPLP 83


Top