BLASTX nr result
ID: Ophiopogon25_contig00024953
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00024953
(371 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_105280124.1| hypothetical protein [Escherichia coli] >gi|... 98 4e-40
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 97 1e-39
gb|ABG22123.1| polyprotein, partial [Prunus avium] 97 2e-39
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 96 1e-38
gb|ABG22121.1| polyprotein, partial [Solanum melongena] 95 2e-38
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 93 2e-36
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 93 2e-36
gb|PNX69499.1| retrovirus-related Pol polyprotein from transposo... 93 4e-36
ref|XP_015866800.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 95 6e-36
ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342... 92 8e-36
ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329... 92 8e-36
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 90 4e-35
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 90 4e-35
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 89 9e-35
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 89 9e-35
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen... 89 9e-35
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 88 2e-34
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 87 3e-34
gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. sco... 94 3e-34
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 98 3e-34
>ref|WP_105280124.1| hypothetical protein [Escherichia coli]
gb|PPY92730.1| hypothetical protein C5P31_25790 [Escherichia coli]
Length = 326
Score = 98.2 bits (243), Expect(2) = 4e-40
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
RE+MS VPYA+ VGSLMYAMVCTRPD+SQAV ++SRYMHNPG+ HW+AVKWIL
Sbjct: 113 REYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWIL 165
Score = 94.7 bits (234), Expect(2) = 4e-40
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = -1
Query: 164 QACIGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
Q+ +GY DSD+AGDLDKRRSTTGYVFT ++APVSW+ TLQSTVALSTTEAEYMA
Sbjct: 184 QSVVGYCDSDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMA 237
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 96.7 bits (239), Expect(2) = 1e-39
Identities = 42/53 (79%), Positives = 50/53 (94%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
+E+M VPY++AVGSLMYAMVCTRPD+SQAVS+VSRYMHNPG+ HW+AVKWIL
Sbjct: 793 QEYMLQVPYSNAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWIL 845
Score = 94.7 bits (234), Expect(2) = 1e-39
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
+GYVDSDYAGDLDKRRSTTGYVFTL+ P+SW+ TLQSTVALSTTEAEYMA
Sbjct: 869 VGYVDSDYAGDLDKRRSTTGYVFTLAGGPISWKSTLQSTVALSTTEAEYMA 919
>gb|ABG22123.1| polyprotein, partial [Prunus avium]
Length = 276
Score = 97.4 bits (241), Expect(2) = 2e-39
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = -2
Query: 364 FMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
+M+ +PYASAVGSLMYAMVCTRPD+SQAVS+VSRYMHNPG+ HW+AVKWIL
Sbjct: 99 YMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWIL 149
Score = 93.2 bits (230), Expect(2) = 2e-39
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = -1
Query: 164 QACIGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
Q +GYVDSDYAGDLDKRRSTTG+VFT++ PVSWR LQSTVALSTTEAEYMA
Sbjct: 170 QCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMA 223
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 95.5 bits (236), Expect(2) = 1e-38
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
+ +MS VPYASAVGSLMYAMVCTRPD+S AV +VSRYMHNPG+ HW+AVKWIL
Sbjct: 873 KAYMSKVPYASAVGSLMYAMVCTRPDISYAVGVVSRYMHNPGKEHWQAVKWIL 925
Score = 92.0 bits (227), Expect(2) = 1e-38
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = -1
Query: 164 QACIGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
Q +GY DS+YAGDLD RRSTTGYVFTL++APV WR TLQSTVALSTTEAEYMA
Sbjct: 945 QNVVGYCDSNYAGDLDNRRSTTGYVFTLAKAPVCWRSTLQSTVALSTTEAEYMA 998
>gb|ABG22121.1| polyprotein, partial [Solanum melongena]
Length = 361
Score = 95.1 bits (235), Expect(2) = 2e-38
Identities = 42/53 (79%), Positives = 50/53 (94%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
RE+M+ VPYA+AVGSLMYAMVCTR D+SQAVS+VSRYMH+PG+ HW+AVKWIL
Sbjct: 182 REYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWIL 234
Score = 92.0 bits (227), Expect(2) = 2e-38
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
+GY DSDYAGDLDKRRSTTGY+FTL++ PVSW+ TLQ+TVALSTTEAEYMA
Sbjct: 258 VGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMA 308
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 93.2 bits (230), Expect(2) = 2e-36
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS +PYASAVGS+MYAMVCTRPD++Q+VS+VSRYM NPG+ HWEAVKWIL
Sbjct: 444 EHMSKIPYASAVGSIMYAMVCTRPDIAQSVSVVSRYMSNPGKRHWEAVKWIL 495
Score = 87.0 bits (214), Expect(2) = 2e-36
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
+GYVDSDYAGDLD+RRSTTGY+FTL + VSW+ TLQS VALSTTEAEYMA
Sbjct: 518 LGYVDSDYAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAEYMA 568
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 93.2 bits (230), Expect(2) = 2e-36
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
R++M+ VPYAS VGSL+YAMVCTRPD+SQAVSMVSRYMHNPG+ W AVKWIL
Sbjct: 70 RDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWIL 122
Score = 87.0 bits (214), Expect(2) = 2e-36
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 164 QACIGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
Q C+GY DSD+AGDLDK+RST+GYVFTL VSWR LQST+ALSTTEAEY+A
Sbjct: 141 QQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIA 194
>gb|PNX69499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 227
Score = 93.2 bits (230), Expect(2) = 4e-36
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -2
Query: 361 MSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
M HVPYASAVGSLMYAMVCTR D+SQAVS+VSR+M NPG+ HWEAVKWIL
Sbjct: 1 MEHVPYASAVGSLMYAMVCTRSDISQAVSVVSRFMANPGKTHWEAVKWIL 50
Score = 86.3 bits (212), Expect(2) = 4e-36
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
G+VDSDYAGDLD+RRSTTGYVF + PVSWR LQSTVALSTTEAEYMA
Sbjct: 72 GFVDSDYAGDLDRRRSTTGYVFQIHGVPVSWRSMLQSTVALSTTEAEYMA 121
>ref|XP_015866800.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107404367, partial [Ziziphus jujuba]
Length = 807
Score = 94.7 bits (234), Expect(2) = 6e-36
Identities = 41/51 (80%), Positives = 48/51 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E+MSHVPY+SAVGSLMYAMVCTRPD++ AVS+VSRYM NPG+ HW+AVKWI
Sbjct: 178 EYMSHVPYSSAVGSLMYAMVCTRPDIAHAVSVVSRYMANPGKQHWQAVKWI 228
Score = 84.0 bits (206), Expect(2) = 6e-36
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
GYVD+D+AGDLD+RRSTTGYVFTL +SW+ LQ+TVALSTTEAEYMA
Sbjct: 259 GYVDADFAGDLDRRRSTTGYVFTLGDTSISWKSVLQATVALSTTEAEYMA 308
>ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342419, partial [Lupinus
angustifolius]
Length = 1102
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 181 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 232
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 538 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 589
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 895 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 946
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 256 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 306
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 613 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 663
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 970 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 1020
>ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329342, partial [Lupinus
angustifolius]
Length = 832
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 95 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 146
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 366 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 417
Score = 92.4 bits (228), Expect(2) = 8e-36
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
E MS VPYASAVGSLMYAM+CTRPD++QAVS+VSRYM +PG+VHW+AVKWI+
Sbjct: 637 EEMSSVPYASAVGSLMYAMICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIM 688
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 170 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 220
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 441 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 491
Score = 85.9 bits (211), Expect(2) = 8e-36
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYAGDLDKRRS TGYVFTL VSW+ TLQS VALSTTEAEY+A
Sbjct: 712 IGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIA 762
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 90.1 bits (222), Expect(2) = 4e-35
Identities = 39/53 (73%), Positives = 48/53 (90%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
++ MSH+PY+SAVGS+MYAMVCTRPD+S AVS+VSRYM PG+ HW+AVKWIL
Sbjct: 1594 KQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWIL 1646
Score = 85.9 bits (211), Expect(2) = 4e-35
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
GYVDSDYAGDLDKRRS TGYVFT S +SW+ LQSTVALSTTEAEYMA
Sbjct: 1670 GYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMA 1719
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 90.1 bits (222), Expect(2) = 4e-35
Identities = 39/53 (73%), Positives = 48/53 (90%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
++ MSH+PY+SAVGS+MYAMVCTRPD+S AVS+VSRYM PG+ HW+AVKWIL
Sbjct: 1615 KQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWIL 1667
Score = 85.9 bits (211), Expect(2) = 4e-35
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
GYVDSDYAGDLDKRRS TGYVFT S +SW+ LQSTVALSTTEAEYMA
Sbjct: 1691 GYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMA 1740
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 89.0 bits (219), Expect(2) = 9e-35
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E+MS VPY+SAVGSLMYAMVC+RPDLS A+S+VSRYM NPG+ HW AV+WI
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWI 1160
Score = 85.9 bits (211), Expect(2) = 9e-35
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYA DLD+RRS TGYVFT+ VSWR TLQS VALSTTEAEYMA
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 89.0 bits (219), Expect(2) = 9e-35
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E+MS VPY+SAVGSLMYAMVC+RPDLS A+S+VSRYM NPG+ HW AV+WI
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWI 1160
Score = 85.9 bits (211), Expect(2) = 9e-35
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYA DLD+RRS TGYVFT+ VSWR TLQS VALSTTEAEYMA
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 502
Score = 89.0 bits (219), Expect(2) = 9e-35
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = -2
Query: 361 MSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
M VPYASAVG LMYAM+CTRPDL+QA+S+VS+YM NPG+ HWEAVKWIL
Sbjct: 278 MKDVPYASAVGCLMYAMICTRPDLAQALSVVSKYMSNPGKPHWEAVKWIL 327
Score = 85.9 bits (211), Expect(2) = 9e-35
Identities = 41/54 (75%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = -1
Query: 161 ACI-GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
AC+ G+VD+DYAGDLDKRRSTTGYVFT PVSW+ TLQ+ ALSTTEAEYMA
Sbjct: 347 ACVAGFVDADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQAVTALSTTEAEYMA 400
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 87.8 bits (216), Expect(2) = 2e-34
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E+MS VPY+SAVGSLMYAMVC+RPDLS A+S+VSRYM NPG+ HW A++WI
Sbjct: 1112 EYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWI 1162
Score = 85.9 bits (211), Expect(2) = 2e-34
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYA DLD+RRS TGYVFT+ VSWR TLQS VALSTTEAEYMA
Sbjct: 1184 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1234
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 87.4 bits (215), Expect(2) = 3e-34
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E+MS VPY+SAVGSLMYAMVC+RPDLS A+S+VSRYM NPG+ HW V+WI
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWI 1160
Score = 85.9 bits (211), Expect(2) = 3e-34
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -1
Query: 155 IGYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
IGYVDSDYA DLD+RRS TGYVFT+ VSWR TLQS VALSTTEAEYMA
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
>gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. scolymus]
Length = 358
Score = 94.4 bits (233), Expect(2) = 3e-34
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -2
Query: 370 REFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWIL 212
+E+MS VPY+SAVGSLMYAM+CTRPDL+ AVSMVSRYM NPGR HW+AV+W+L
Sbjct: 181 KEYMSRVPYSSAVGSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQWVL 233
Score = 79.0 bits (193), Expect(2) = 3e-34
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
GYVDSDY GDLD RRS TGYVFT+ +SW+ LQ TVA+STTEAEYMA
Sbjct: 255 GYVDSDYGGDLDGRRSLTGYVFTMGSCAISWKAVLQPTVAVSTTEAEYMA 304
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 98.2 bits (243), Expect(2) = 3e-34
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -2
Query: 367 EFMSHVPYASAVGSLMYAMVCTRPDLSQAVSMVSRYMHNPGRVHWEAVKWI 215
E MSHVPYASAVGSLMYAMVCTRPDL+ AVSMVSRYMHNPG+ HW AVKWI
Sbjct: 805 ERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWI 855
Score = 74.7 bits (182), Expect(2) = 3e-34
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = -1
Query: 152 GYVDSDYAGDLDKRRSTTGYVFTLSQAPVSWRCTLQSTVALSTTEAEYMA 3
G+VDSDY GDLD+RRS +GY+FTL + +SW+ +LQS ALSTTEAEY++
Sbjct: 881 GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVS 930