BLASTX nr result
ID: Ophiopogon25_contig00024894
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00024894
(510 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010928099.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 101 7e-22
ref|XP_010928098.1| PREDICTED: RNA-binding protein cabeza-like [... 100 3e-21
ref|XP_010928097.1| PREDICTED: RNA-binding protein cabeza-like [... 99 5e-21
ref|XP_017701713.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 97 3e-20
ref|XP_009386605.1| PREDICTED: cleavage and polyadenylation spec... 93 7e-19
gb|PKA59817.1| Glycine-rich RNA-binding protein 2, mitochondrial... 92 1e-18
ref|XP_010943293.1| PREDICTED: RNA-binding protein cabeza-like [... 90 1e-17
ref|XP_008788908.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 90 1e-17
ref|XP_009412148.1| PREDICTED: cleavage and polyadenylation spec... 89 2e-17
ref|XP_020590502.1| cleavage and polyadenylation specificity fac... 87 1e-16
ref|XP_009399899.1| PREDICTED: spidroin-1-like [Musa acuminata s... 86 3e-16
ref|XP_020110829.1| LOW QUALITY PROTEIN: cleavage and polyadenyl... 82 7e-15
gb|OAY63092.1| RNA-binding motif protein, X-linked-like-2 [Anana... 82 7e-15
ref|XP_009391779.1| PREDICTED: cleavage and polyadenylation spec... 81 1e-14
ref|XP_020691711.1| cleavage and polyadenylation specificity fac... 80 3e-14
gb|PKA52981.1| Glycine-rich RNA-binding protein 2, mitochondrial... 79 9e-14
ref|XP_020082846.1| cleavage and polyadenylation specificity fac... 77 2e-13
gb|OAY84774.1| Nipped-B-like protein B [Ananas comosus] 77 2e-13
ref|XP_015612300.1| PREDICTED: death-inducer obliterator 1 [Oryz... 75 1e-12
gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indi... 75 1e-12
>ref|XP_010928099.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein cabeza-like
[Elaeis guineensis]
Length = 576
Score = 101 bits (252), Expect = 7e-22
Identities = 54/99 (54%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVG GF S
Sbjct: 12 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGGGFLHSVHRSDDSGGYPREDGSRSNPV 71
Query: 270 XXXAV-----DLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
A+ + P+KVQIPG+ + K E+P DRSGGF E
Sbjct: 72 PPPALPPPSGEAPEKVQIPGIAGDSKIERPMDRSGGFHE 110
>ref|XP_010928098.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 597
Score = 100 bits (248), Expect = 3e-21
Identities = 53/99 (53%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FHRNEAISAVQDEEQ YGEDEDYDDLYNDVNVGEGF +
Sbjct: 15 FHRNEAISAVQDEEQLYGEDEDYDDLYNDVNVGEGFLHAVHRTDEPGGYPREDGSRRKPA 74
Query: 270 XXXAV-----DLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
V + P+KVQIPG+ + K E+P DRSGGF E
Sbjct: 75 PPPPVLPPSGEAPEKVQIPGIAGDPKIERPVDRSGGFHE 113
>ref|XP_010928097.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 570
Score = 99.4 bits (246), Expect = 5e-21
Identities = 53/96 (55%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA--XXXXXXXXXXXXXXXXXX 263
FHRNEAISAVQDEEQFYGEDEDYD LYNDVNVG GF QS
Sbjct: 12 FHRNEAISAVQDEEQFYGEDEDYDGLYNDVNVGGGFLQSVHQNDECGGYPREDGSRSNPA 71
Query: 264 XXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
+ + P+KVQIPG+ + K E+P DRSGGF E
Sbjct: 72 PPPPPSGEAPEKVQIPGIAGDPKIERPVDRSGGFHE 107
>ref|XP_017701713.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein cabeza-like
[Phoenix dactylifera]
Length = 573
Score = 97.1 bits (240), Expect = 3e-20
Identities = 59/146 (40%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA-----XXXXXXXXXXXXXXX 254
FHRNEAISAVQ+EEQFYGEDEDY+DLYNDVNVGEGF +
Sbjct: 12 FHRNEAISAVQEEEQFYGEDEDYEDLYNDVNVGEGFQHAVHRSDEPRGYPREDGSRSNPA 71
Query: 255 XXXXXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFSEXXXXXXXXXXXXXXXXXDLGG 434
+VD P+KVQIPG+ + K +P D SGGF E G
Sbjct: 72 PPLPLLPPSVDAPEKVQIPGIAGDPKIGRPVDTSGGFHEQALRAAPPPGGSRPELGRSSG 131
Query: 435 XXXXXXXPP-NTSFQNEPFHRQRGNF 509
N+ + NE + RQ G F
Sbjct: 132 RPGELQGQSRNSGYGNEGYQRQGGGF 157
>ref|XP_009386605.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
Length = 619
Score = 93.2 bits (230), Expect = 7e-19
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FHR+EAISAVQDEEQFYGED++YDDLY+DVNVGEGF Q+
Sbjct: 12 FHRSEAISAVQDEEQFYGEDDEYDDLYSDVNVGEGFHQTFHGGDDARGFQDRDERLSDHP 71
Query: 270 XXXAVDLP--------DKVQIPGVVQEVKPEKPPDRSGGFSE 371
D P ++VQIPG+ E K E+P DRSGGF +
Sbjct: 72 PPPPQDPPQQSVVEPLERVQIPGIAGEPKIERPADRSGGFPD 113
>gb|PKA59817.1| Glycine-rich RNA-binding protein 2, mitochondrial [Apostasia
shenzhenica]
Length = 645
Score = 92.4 bits (228), Expect = 1e-18
Identities = 51/100 (51%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
+H NE ISAV+DEEQFYGEDEDYDDLYNDVNVGEGFFQS+
Sbjct: 18 YHGNEVISAVEDEEQFYGEDEDYDDLYNDVNVGEGFFQSSINRGEAAAGSLTREDEIRGE 77
Query: 270 XXXAV-------DLPDKVQIPGVVQEVKPEKPPDRSGGFS 368
A D +KVQIPGV +VK ++ D SGGF+
Sbjct: 78 QPPAPVPPPPTGDTLEKVQIPGVAGDVKVDRLVDGSGGFT 117
>ref|XP_010943293.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
ref|XP_010943294.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 604
Score = 89.7 bits (221), Expect = 1e-17
Identities = 52/102 (50%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQS--------AXXXXXXXXXXXX 245
FHRNEAISAVQDEEQFYGED DYDDLYNDVNVGEG S
Sbjct: 18 FHRNEAISAVQDEEQFYGED-DYDDLYNDVNVGEGLLHSVQRGDEPRGYPREEGNRINPA 76
Query: 246 XXXXXXXXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
+ + P+KVQIPG+ E K E+P D SGGF E
Sbjct: 77 PPPPPPAPVPPSGNAPEKVQIPGIAGEPKIERPVDGSGGFHE 118
>ref|XP_008788908.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 6-like [Phoenix dactylifera]
Length = 608
Score = 89.7 bits (221), Expect = 1e-17
Identities = 53/105 (50%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FHRNEAISAVQDEEQFYGED DYDDLYNDVNVGEG S
Sbjct: 18 FHRNEAISAVQDEEQFYGED-DYDDLYNDVNVGEGLLHSVHRSDEPRGYPREEGNRSNPA 76
Query: 270 XXXAVDL-----------PDKVQIPGVVQEVKPEKPPDRSGGFSE 371
A L P+KVQIPG+ + K E+P D SGGF E
Sbjct: 77 PAPAPALPPAPLPPSGNAPEKVQIPGIAGDPKIERPVDGSGGFHE 121
>ref|XP_009412148.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
ref|XP_018684079.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
Length = 634
Score = 89.4 bits (220), Expect = 2e-17
Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGF------------FQSAXXXXXXXX 233
FHRNEAISAVQDEEQFYGED+DYDDLY+DVNVG+GF FQ+
Sbjct: 17 FHRNEAISAVQDEEQFYGEDDDYDDLYSDVNVGDGFHQNFQGGDDAEGFQAGDERRSEPQ 76
Query: 234 XXXXXXXXXXXXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
+ ++VQIPG+ E K E+ DRS GF +
Sbjct: 77 PPPPPPLPIPAPQQPVAETSERVQIPGIAGEPKIERVADRSAGFQD 122
>ref|XP_020590502.1| cleavage and polyadenylation specificity factor subunit 6
[Phalaenopsis equestris]
ref|XP_020590503.1| cleavage and polyadenylation specificity factor subunit 6
[Phalaenopsis equestris]
Length = 637
Score = 86.7 bits (213), Expect = 1e-16
Identities = 48/101 (47%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FH NE ISAVQDEEQFYG++EDYDDLYNDVNVGEGF+QS+
Sbjct: 12 FHGNEVISAVQDEEQFYGDEEDYDDLYNDVNVGEGFYQSSAHRSEATSSTFATEDDGRRE 71
Query: 270 XXX-------AVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
A D P+ +QIP V + E+ DRSG FS+
Sbjct: 72 PPQVSLPSPPAGDPPESIQIPVVAGNLHAEETVDRSGVFSD 112
>ref|XP_009399899.1| PREDICTED: spidroin-1-like [Musa acuminata subsp. malaccensis]
ref|XP_009399907.1| PREDICTED: spidroin-1-like [Musa acuminata subsp. malaccensis]
Length = 618
Score = 85.5 bits (210), Expect = 3e-16
Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQS--------AXXXXXXXXXXXX 245
FHR+EAISAVQDEEQF+GED++YDDLY+DVNVGEGF Q+
Sbjct: 7 FHRSEAISAVQDEEQFFGEDDEYDDLYSDVNVGEGFHQTFHGGEDAGGFQARDERRSELP 66
Query: 246 XXXXXXXXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
V+ + VQIPG+ E K E+ DRSGGF +
Sbjct: 67 PPPPAPPPTRPVVEPSEMVQIPGIATEPKIERFSDRSGGFPD 108
>ref|XP_020110829.1| LOW QUALITY PROTEIN: cleavage and polyadenylation specificity
factor subunit 6-like [Ananas comosus]
Length = 538
Score = 81.6 bits (200), Expect = 7e-15
Identities = 48/102 (47%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FH NEAISAVQDE+QFYGED+DYDDLYNDVNVG+GF S
Sbjct: 17 FHPNEAISAVQDEDQFYGEDDDYDDLYNDVNVGDGFLHSVARSGGGGGAGGFPGEEPACR 76
Query: 270 XXXAVDLPD-------KVQIPGVVQEVKPEKP-PDRSGGFSE 371
A P +VQIPG+ K E+P DRS GF +
Sbjct: 77 PHAAAAPPPPTAPEKVQVQIPGIAGVPKIERPSADRSVGFPD 118
>gb|OAY63092.1| RNA-binding motif protein, X-linked-like-2 [Ananas comosus]
Length = 591
Score = 81.6 bits (200), Expect = 7e-15
Identities = 48/102 (47%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXXX 269
FH NEAISAVQDE+QFYGED+DYDDLYNDVNVG+GF S
Sbjct: 17 FHPNEAISAVQDEDQFYGEDDDYDDLYNDVNVGDGFLHSVARSGGGGGAGGFPGEEPACR 76
Query: 270 XXXAVDLPD-------KVQIPGVVQEVKPEKP-PDRSGGFSE 371
A P +VQIPG+ K E+P DRS GF +
Sbjct: 77 PHAAAAPPPPTAPEKVQVQIPGIAGVPKIERPSADRSVGFPD 118
>ref|XP_009391779.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Musa acuminata subsp. malaccensis]
Length = 625
Score = 81.3 bits (199), Expect = 1e-14
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA--XXXXXXXXXXXXXXXXXX 263
FHR EAI+AVQDEEQFYG+++D+DDLY+DVNVGEGF QS+
Sbjct: 17 FHRGEAIAAVQDEEQFYGDEDDFDDLYSDVNVGEGFLQSSRRSDEPAPDAVLAETPLPPP 76
Query: 264 XXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGFS 368
+ LP+KV +PG+ E+K E RS G S
Sbjct: 77 PPLPPSAPLPEKVHLPGITGEIKME----RSAGVS 107
>ref|XP_020691711.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
ref|XP_020691712.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
ref|XP_020691713.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
gb|PKU87547.1| Glycine-rich RNA-binding protein 7 [Dendrobium catenatum]
Length = 636
Score = 79.7 bits (195), Expect = 3e-14
Identities = 48/102 (47%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDED-YDDLYNDVNVGEGFFQSAXXXXXXXXXXXXXXXXXXX 266
FH E ISAVQDEE FYG+DED YDDLYNDVNVGEGF+QS+
Sbjct: 20 FHGREVISAVQDEEPFYGDDEDDYDDLYNDVNVGEGFYQSSALRGEAVSGGFAGEDDIRR 79
Query: 267 XXXX-------AVDLPDKVQIPGVVQEVKPEKPPDRSGGFSE 371
A DL + V IPG ++ E+ DRSG FSE
Sbjct: 80 EPPQVPVAVAPAGDLQEGVHIPGTEGNLQAERTVDRSGVFSE 121
>gb|PKA52981.1| Glycine-rich RNA-binding protein 2, mitochondrial [Apostasia
shenzhenica]
Length = 638
Score = 78.6 bits (192), Expect = 9e-14
Identities = 47/97 (48%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Frame = +3
Query: 99 NEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQ--------SAXXXXXXXXXXXXXXX 254
NE ISAVQDEEQFYGEDEDYDDLYNDVNVGEGF+Q S+
Sbjct: 15 NEVISAVQDEEQFYGEDEDYDDLYNDVNVGEGFYQSSIHRDVASSGSFPKEEETRKEPTP 74
Query: 255 XXXXXXXXAVDLPDKVQIPGVVQEVKPEKPPDRSGGF 365
D P+KV IPG+ E + DRS GF
Sbjct: 75 PPPLPPPPGGDPPEKVSIPGIAGEPDLNR-MDRSEGF 110
>ref|XP_020082846.1| cleavage and polyadenylation specificity factor subunit 6 [Ananas
comosus]
ref|XP_020082847.1| cleavage and polyadenylation specificity factor subunit 6 [Ananas
comosus]
Length = 629
Score = 77.4 bits (189), Expect = 2e-13
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA 209
FH +EAISAVQ+EEQFYGED+DYDDLYNDVNVGEGF QS+
Sbjct: 19 FHHSEAISAVQEEEQFYGEDDDYDDLYNDVNVGEGFLQSS 58
>gb|OAY84774.1| Nipped-B-like protein B [Ananas comosus]
Length = 637
Score = 77.4 bits (189), Expect = 2e-13
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA 209
FH +EAISAVQ+EEQFYGED+DYDDLYNDVNVGEGF QS+
Sbjct: 19 FHHSEAISAVQEEEQFYGEDDDYDDLYNDVNVGEGFLQSS 58
>ref|XP_015612300.1| PREDICTED: death-inducer obliterator 1 [Oryza sativa Japonica
Group]
dbj|BAD46377.1| RNA-binding protein-like [Oryza sativa Japonica Group]
dbj|BAF25377.1| Os09g0476100 [Oryza sativa Japonica Group]
gb|EAZ45108.1| hypothetical protein OsJ_29744 [Oryza sativa Japonica Group]
dbj|BAG94363.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAT08605.1| Os09g0476100 [Oryza sativa Japonica Group]
Length = 604
Score = 75.5 bits (184), Expect = 1e-12
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA 209
FHRNEAISAVQD +Q+YG+D+DYDDLYNDVNVG+GF QS+
Sbjct: 9 FHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGFLQSS 48
>gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
Length = 604
Score = 75.5 bits (184), Expect = 1e-12
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = +3
Query: 90 FHRNEAISAVQDEEQFYGEDEDYDDLYNDVNVGEGFFQSA 209
FHRNEAISAVQD +Q+YG+D+DYDDLYNDVNVG+GF QS+
Sbjct: 9 FHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGFLQSS 48