BLASTX nr result

ID: Ophiopogon25_contig00024460 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00024460
         (725 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus...   164   1e-42
ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI ...   164   1e-42

>gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus officinalis]
          Length = 1047

 Score =  164 bits (415), Expect = 1e-42
 Identities = 106/235 (45%), Positives = 133/235 (56%), Gaps = 24/235 (10%)
 Frame = +3

Query: 3    FGRSPEK-VGASSESNVA----------------------RMPVRFNLEDTDVRSCIPEI 113
            FGRSPEK VGA+SE NV                       ++ +  N+E       IPEI
Sbjct: 822  FGRSPEKLVGANSERNVKGRASTKSGGGSAGKENGSNLFKKLSLERNVE------IIPEI 875

Query: 114  EHKSGADMVITRLKEDGANDMSNENPGTTVDGTTMLFNCRKRLNDSMANEYLGLDLKRTQ 293
            EHKSGAD VIT+LKEDGAN MS ENP T V+G   L N +KR NDS++ ++L  DL + Q
Sbjct: 876  EHKSGADKVITQLKEDGANGMSEENPSTVVNGQQKLRNRKKRHNDSLSTDHLEADLNQKQ 935

Query: 294  QKKARQNGIDAAEEKSLLCILDSGKPHVSEAASLVGNAALLSASCYG-KEKTQEQETGSA 470
            QKKA+Q+G D  EE S + IL++G   +SE  S   N   L+  C+G +   QEQE GSA
Sbjct: 936  QKKAKQSGNDMLEENSSVRILNNGNSRISENPSPSSN---LTPPCHGYQNAAQEQENGSA 992

Query: 471  FLEPGEPAKKIAVLKDGDQCNRVGNXXXXXXXXXXXXXXXMKYSRLKKLWHFLRT 635
            FLE G+PA +IA LK+GD  N V +                K SRL K+W FL T
Sbjct: 993  FLEGGQPANEIASLKEGDGGNHVTSEEVDSDDNSGDEVEEAKSSRLHKIWFFLTT 1047


>ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI 4-like [Asparagus
            officinalis]
          Length = 1055

 Score =  164 bits (415), Expect = 1e-42
 Identities = 106/235 (45%), Positives = 133/235 (56%), Gaps = 24/235 (10%)
 Frame = +3

Query: 3    FGRSPEK-VGASSESNVA----------------------RMPVRFNLEDTDVRSCIPEI 113
            FGRSPEK VGA+SE NV                       ++ +  N+E       IPEI
Sbjct: 830  FGRSPEKLVGANSERNVKGRASTKSGGGSAGKENGSNLFKKLSLERNVE------IIPEI 883

Query: 114  EHKSGADMVITRLKEDGANDMSNENPGTTVDGTTMLFNCRKRLNDSMANEYLGLDLKRTQ 293
            EHKSGAD VIT+LKEDGAN MS ENP T V+G   L N +KR NDS++ ++L  DL + Q
Sbjct: 884  EHKSGADKVITQLKEDGANGMSEENPSTVVNGQQKLRNRKKRHNDSLSTDHLEADLNQKQ 943

Query: 294  QKKARQNGIDAAEEKSLLCILDSGKPHVSEAASLVGNAALLSASCYG-KEKTQEQETGSA 470
            QKKA+Q+G D  EE S + IL++G   +SE  S   N   L+  C+G +   QEQE GSA
Sbjct: 944  QKKAKQSGNDMLEENSSVRILNNGNSRISENPSPSSN---LTPPCHGYQNAAQEQENGSA 1000

Query: 471  FLEPGEPAKKIAVLKDGDQCNRVGNXXXXXXXXXXXXXXXMKYSRLKKLWHFLRT 635
            FLE G+PA +IA LK+GD  N V +                K SRL K+W FL T
Sbjct: 1001 FLEGGQPANEIASLKEGDGGNHVTSEEVDSDDNSGDEVEEAKSSRLHKIWFFLTT 1055


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