BLASTX nr result
ID: Ophiopogon25_contig00024262
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00024262
(477 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28135.3| unnamed protein product, partial [Vitis vinifera] 66 8e-20
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi... 66 8e-20
gb|OMO57948.1| hypothetical protein COLO4_34962 [Corchorus olito... 67 1e-18
gb|PIA65367.1| hypothetical protein AQUCO_00100680v1, partial [A... 60 5e-18
ref|XP_010249926.1| PREDICTED: pentatricopeptide repeat-containi... 57 1e-17
ref|XP_022755088.1| pentatricopeptide repeat-containing protein ... 65 3e-17
ref|XP_022755089.1| pentatricopeptide repeat-containing protein ... 65 3e-17
gb|PPD75980.1| hypothetical protein GOBAR_DD27090 [Gossypium bar... 61 7e-17
ref|XP_016690286.1| PREDICTED: pentatricopeptide repeat-containi... 61 7e-17
ref|XP_012446188.1| PREDICTED: pentatricopeptide repeat-containi... 61 7e-17
gb|PPS01834.1| hypothetical protein GOBAR_AA18809 [Gossypium bar... 61 2e-16
ref|XP_017607808.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-16
ref|XP_016690012.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-16
ref|XP_021903241.1| pentatricopeptide repeat-containing protein ... 62 6e-16
ref|XP_009371415.1| PREDICTED: pentatricopeptide repeat-containi... 55 3e-15
ref|XP_008354513.1| PREDICTED: pentatricopeptide repeat-containi... 55 3e-15
ref|XP_008390139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 55 3e-15
ref|XP_007138332.1| hypothetical protein PHAVU_009G199900g [Phas... 54 3e-15
gb|ACZ98537.1| PPR motif protein [Malus domestica] 55 3e-15
ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-15
>emb|CBI28135.3| unnamed protein product, partial [Vitis vinifera]
Length = 1974
Score = 66.2 bits (160), Expect(3) = 8e-20
Identities = 29/54 (53%), Positives = 42/54 (77%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKNS 153
H QA EALA +KH+ +G++PD +TFT +LS+CS+ GLV+EG LFA+M K++
Sbjct: 1729 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHN 1782
Score = 51.6 bits (122), Expect(3) = 8e-20
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
G+I R F +A S+ DMY KCGSI + +VF ++S K+LP++NA + Y
Sbjct: 1674 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAY 1726
Score = 26.6 bits (57), Expect(3) = 8e-20
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 17/59 (28%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMDGQR*YLG 34
K + P E+YGC+V T PF ILGS+L C + LG
Sbjct: 1780 KHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELG 1838
>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Vitis vinifera]
Length = 858
Score = 66.2 bits (160), Expect(3) = 8e-20
Identities = 29/54 (53%), Positives = 42/54 (77%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKNS 153
H QA EALA +KH+ +G++PD +TFT +LS+CS+ GLV+EG LFA+M K++
Sbjct: 634 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHN 687
Score = 51.6 bits (122), Expect(3) = 8e-20
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
G+I R F +A S+ DMY KCGSI + +VF ++S K+LP++NA + Y
Sbjct: 579 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAY 631
Score = 26.6 bits (57), Expect(3) = 8e-20
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 17/59 (28%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMDGQR*YLG 34
K + P E+YGC+V T PF ILGS+L C + LG
Sbjct: 685 KHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELG 743
>gb|OMO57948.1| hypothetical protein COLO4_34962 [Corchorus olitorius]
Length = 1797
Score = 67.4 bits (163), Expect(3) = 1e-18
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKNSA*HHRR 135
H QA EALA YKH+ G++PDD+TFT +LS+CS+ GLV+EG ++F +M K HH R
Sbjct: 1596 HGQAGEALAVYKHLDEAGIEPDDITFTSVLSACSHTGLVNEGLEIFFDMVSK----HHTR 1651
Query: 134 SIM 126
M
Sbjct: 1652 PSM 1654
Score = 50.8 bits (120), Expect(3) = 1e-18
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R F S S++ ++ DMY KCGS+ + RVF+ + +K++P++NA + Y
Sbjct: 1541 GYCIRHEFGSQVSVSTALVDMYAKCGSLSQAKRVFDGIVNKEVPVYNAMISAY 1593
Score = 22.3 bits (46), Expect(3) = 1e-18
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 17/47 (36%)
Frame = -1
Query: 144 PQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
P E+YGC+V T P+ I+GS++ C +
Sbjct: 1652 PSMEHYGCVVSLLSRSGDLDEAIRFIHTMPYEPDAHIIGSLVAACKE 1698
>gb|PIA65367.1| hypothetical protein AQUCO_00100680v1, partial [Aquilegia coerulea]
Length = 780
Score = 60.1 bits (144), Expect(3) = 5e-18
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GYI R GF S S++ S+ DMYTKCGS+ L+ + F+I K+LPL+N + Y
Sbjct: 559 GYITRHGFFSSISLSASIIDMYTKCGSLSLAKKAFDIQLSKELPLYNVMISGY 611
Score = 57.4 bits (137), Expect(3) = 5e-18
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = -2
Query: 326 GLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEM 168
G H Q +ALA YK M +G++PD ++FT +LS+CS+ GLV EG ++F +M
Sbjct: 610 GYAMHGQTVDALALYKEMQEEGIEPDRISFTAVLSACSHAGLVGEGLEVFTKM 662
Score = 20.8 bits (42), Expect(3) = 5e-18
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 150 LTPQKEYYGCLVT 112
+ P E+YGC+V+
Sbjct: 668 VNPSMEHYGCVVS 680
>ref|XP_010249926.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Nelumbo nucifera]
Length = 855
Score = 57.4 bits (137), Expect(3) = 1e-17
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -2
Query: 350 PAFAQCKCGLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAE 171
P + G H Q A AF++ M + ++PD +TFT LLS+CS+ GLVD+GF++F E
Sbjct: 625 PCYNAMILGHALHGQPAGAFAFFEEMKKEKIQPDGITFTGLLSACSHAGLVDKGFEVFTE 684
Query: 170 MTFK 159
M K
Sbjct: 685 MFSK 688
Score = 50.1 bits (118), Expect(3) = 1e-17
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANV 326
GY++R + SI S+ DMY KCGSI L+ +VF+ + +K+LP +NA +
Sbjct: 582 GYVMRHEISTSPSIVTSLVDMYAKCGSIDLAKKVFDSILNKELPCYNAMI 631
Score = 29.6 bits (65), Expect(3) = 1e-17
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 17/61 (27%)
Frame = -1
Query: 165 F*KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMDGQR*YL 37
F K+ + P KE+YGCLV T P ILGS+L C + L
Sbjct: 686 FSKYHVMPSKEHYGCLVTLLSRCGSLEGALRFILTMPIEPDAHILGSLLAACREHNETDL 745
Query: 36 G 34
G
Sbjct: 746 G 746
>ref|XP_022755088.1| pentatricopeptide repeat-containing protein At5g55740,
chloroplastic isoform X1 [Durio zibethinus]
Length = 836
Score = 64.7 bits (156), Expect(3) = 3e-17
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA+EALA YKH+ G++PD +TFT +LS+CS+ GLV+EG ++F +M K+
Sbjct: 635 HGQAREALAVYKHLEEVGVEPDGITFTSVLSACSHTGLVNEGLEIFVDMVSKH 687
Score = 46.2 bits (108), Expect(3) = 3e-17
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S ++ ++ DMY KCG + + RVF+ + K+LP++NA + Y
Sbjct: 580 GYAIRHDLDSQICVSTALVDMYAKCGYLSQAKRVFDNILSKELPVYNAMISAY 632
Score = 24.6 bits (52), Expect(3) = 3e-17
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 17/59 (28%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMDGQR*YLG 34
K L P E+YGC+V T P+ I+GS+L C + LG
Sbjct: 686 KHHLWPSMEHYGCVVSLLSRSGHLNEAFRLILTMPYEPDAHIIGSLLAACGEHNEIELG 744
>ref|XP_022755089.1| pentatricopeptide repeat-containing protein At5g55740,
chloroplastic isoform X2 [Durio zibethinus]
Length = 680
Score = 64.7 bits (156), Expect(3) = 3e-17
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA+EALA YKH+ G++PD +TFT +LS+CS+ GLV+EG ++F +M K+
Sbjct: 479 HGQAREALAVYKHLEEVGVEPDGITFTSVLSACSHTGLVNEGLEIFVDMVSKH 531
Score = 46.2 bits (108), Expect(3) = 3e-17
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S ++ ++ DMY KCG + + RVF+ + K+LP++NA + Y
Sbjct: 424 GYAIRHDLDSQICVSTALVDMYAKCGYLSQAKRVFDNILSKELPVYNAMISAY 476
Score = 24.6 bits (52), Expect(3) = 3e-17
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 17/59 (28%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMDGQR*YLG 34
K L P E+YGC+V T P+ I+GS+L C + LG
Sbjct: 530 KHHLWPSMEHYGCVVSLLSRSGHLNEAFRLILTMPYEPDAHIIGSLLAACGEHNEIELG 588
>gb|PPD75980.1| hypothetical protein GOBAR_DD27090 [Gossypium barbadense]
Length = 836
Score = 61.2 bits (147), Expect(3) = 7e-17
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 7e-17
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 24.3 bits (51), Expect(3) = 7e-17
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T PF I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPFEPDAHIIGQLIAKCRE 737
>ref|XP_016690286.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Gossypium hirsutum]
Length = 836
Score = 61.2 bits (147), Expect(3) = 7e-17
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 7e-17
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 24.3 bits (51), Expect(3) = 7e-17
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T PF I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPFEPDAHIIGQLIAKCRE 737
>ref|XP_012446188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Gossypium raimondii]
gb|KJB54133.1| hypothetical protein B456_009G022200 [Gossypium raimondii]
Length = 836
Score = 61.2 bits (147), Expect(3) = 7e-17
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 7e-17
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 24.3 bits (51), Expect(3) = 7e-17
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T PF I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPFEPDAHIIGQLIAKCRE 737
>gb|PPS01834.1| hypothetical protein GOBAR_AA18809 [Gossypium barbadense]
Length = 836
Score = 61.2 bits (147), Expect(3) = 2e-16
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 2e-16
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 23.1 bits (48), Expect(3) = 2e-16
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T P+ I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPYEPDAHIIGQLIAKCRE 737
>ref|XP_017607808.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Gossypium arboreum]
Length = 836
Score = 61.2 bits (147), Expect(3) = 2e-16
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 2e-16
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 23.1 bits (48), Expect(3) = 2e-16
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T P+ I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPYEPDAHIIGQLIAKCRE 737
>ref|XP_016690012.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Gossypium hirsutum]
Length = 836
Score = 61.2 bits (147), Expect(3) = 2e-16
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKN 156
H QA EALA YK++ G++PD +TFT +LS+CS+ GLV+EG ++F EM K+
Sbjct: 635 HGQAGEALAVYKNLKEAGIEPDGITFTSVLSACSHTGLVNEGLEIFIEMASKH 687
Score = 48.9 bits (115), Expect(3) = 2e-16
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GY +R S S++ ++ DMY KCG + + RVF+ +S +LP++NA + Y
Sbjct: 580 GYAIRHDLGSQISVSTALVDMYAKCGCLSRAKRVFDHISSNELPVYNAMISAY 632
Score = 23.1 bits (48), Expect(3) = 2e-16
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 17/52 (32%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
K L+P E+YGC+V T P+ I+G ++ C +
Sbjct: 686 KHHLSPSMEHYGCVVSLLSRSGRLDEAFRLILTMPYEPDAHIIGQLIAKCRE 737
>ref|XP_021903241.1| pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Carica papaya]
Length = 843
Score = 62.0 bits (149), Expect(3) = 6e-16
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEMTFKNS 153
H QA+EAL YKH+H G++PD +TFT +LS+C++ +V EG +LF +M K S
Sbjct: 637 HGQAEEALTLYKHLHEAGVEPDSITFTNILSACNHAEMVKEGLELFVQMISKYS 690
Score = 44.7 bits (104), Expect(3) = 6e-16
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GYI R ++ S+ DMY KCGSI + FE K+LPL+NA + Y
Sbjct: 582 GYITRHNLCYSTPVSTSLVDMYAKCGSIDQAKAFFETKLIKELPLYNAMISAY 634
Score = 24.6 bits (52), Expect(3) = 6e-16
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 17/59 (28%)
Frame = -1
Query: 159 KFCLTPQKEYYGCLVT-----------------HPFNSYTPILGSILDTCMDGQR*YLG 34
K+ + P E+YGC+V P+ I+GS++ C + + LG
Sbjct: 688 KYSIKPTIEHYGCVVNLLSRHGNLDEALRFVHQMPYEPDAHIIGSLIAACREQNKVQLG 746
>ref|XP_009371415.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic [Pyrus x bretschneideri]
Length = 838
Score = 55.1 bits (131), Expect(3) = 3e-15
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = -2
Query: 350 PAFAQCKCGLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAE 171
P + G H QA EALA Y+ + +G+KPD++TFT L +CS+ +V EG +LF +
Sbjct: 626 PIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVD 685
Query: 170 M 168
M
Sbjct: 686 M 686
Score = 48.5 bits (114), Expect(3) = 3e-15
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANV 326
GY++R IA S+ +MY KCG+ + RVF+++ DK+LP++NA +
Sbjct: 583 GYLIRHSLYLSIPIATSLVNMYAKCGNRDQAKRVFDMIPDKELPIYNAMI 632
Score = 25.0 bits (53), Expect(3) = 3e-15
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 17/49 (34%)
Frame = -1
Query: 150 LTPQKEYYGCLV-----------------THPFNSYTPILGSILDTCMD 55
+ P E+YGC+V T P+ ILGS+L C +
Sbjct: 692 INPSIEHYGCMVSLLSRCGDLDEAFRLISTMPYKPDVQILGSLLAACRE 740
>ref|XP_008354513.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Malus domestica]
Length = 838
Score = 55.1 bits (131), Expect(3) = 3e-15
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = -2
Query: 350 PAFAQCKCGLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAE 171
P + G H QA EALA Y+ + +G+KPD++TFT L +CS+ +V EG +LF +
Sbjct: 626 PIYNAMISGFALHGQAVEALALYRCLXEEGLKPDNITFTNALYACSHAMMVSEGLELFVD 685
Query: 170 M 168
M
Sbjct: 686 M 686
Score = 50.1 bits (118), Expect(3) = 3e-15
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANV 326
GY++R IA S+ DMY KCG + RVF+++ DK+LP++NA +
Sbjct: 583 GYLIRHSLYLSIPIATSLVDMYAKCGBRDQAKRVFDMIPDKELPIYNAMI 632
Score = 23.5 bits (49), Expect(3) = 3e-15
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 17/49 (34%)
Frame = -1
Query: 150 LTPQKEYYGCLVT-----------------HPFNSYTPILGSILDTCMD 55
+ P E+YGC+V+ P+ ILGS+L C +
Sbjct: 692 INPSIEHYGCMVSLLSRCGDLDEAFRLISAMPYKPDVQILGSLLAACRE 740
>ref|XP_008390139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55740, chloroplastic [Malus domestica]
Length = 838
Score = 55.1 bits (131), Expect(3) = 3e-15
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = -2
Query: 350 PAFAQCKCGLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAE 171
P + G H QA EALA Y+ + +G+KPD++TFT L +CS+ +V EG +LF +
Sbjct: 626 PIYNAMISGFALHGQAVEALALYRCLXEEGLKPDNITFTNALYACSHAMMVSEGLELFVD 685
Query: 170 M 168
M
Sbjct: 686 M 686
Score = 50.1 bits (118), Expect(3) = 3e-15
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANV 326
GY++R IA S+ DMY KCG + RVF+++ DK+LP++NA +
Sbjct: 583 GYLIRHSLYLSIPIATSLVDMYAKCGBRDQAKRVFDMIPDKELPIYNAMI 632
Score = 23.5 bits (49), Expect(3) = 3e-15
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 17/49 (34%)
Frame = -1
Query: 150 LTPQKEYYGCLVT-----------------HPFNSYTPILGSILDTCMD 55
+ P E+YGC+V+ P+ ILGS+L C +
Sbjct: 692 INPSIEHYGCMVSLLSRCGDLDEAFRLISXMPYKPDVQILGSLLAACRE 740
>ref|XP_007138332.1| hypothetical protein PHAVU_009G199900g [Phaseolus vulgaris]
gb|ESW10326.1| hypothetical protein PHAVU_009G199900g [Phaseolus vulgaris]
Length = 818
Score = 53.5 bits (127), Expect(3) = 3e-15
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = -2
Query: 314 HRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEM 168
H QA+EALA +K + KG+ PD +T T +LS+CS+ GLV EG ++F M
Sbjct: 620 HGQAREALALFKQLGKKGIVPDHITLTSVLSACSHGGLVKEGIEIFKYM 668
Score = 50.4 bits (119), Expect(3) = 3e-15
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GYI+R +IA ++ DMY KCG++ + VF + S K+LP++NA + Y
Sbjct: 565 GYIMRHYMFQSLNIATTIMDMYAKCGALNDAKHVFSLCSTKELPVYNAMISAY 617
Score = 24.6 bits (52), Expect(3) = 3e-15
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 17/47 (36%)
Frame = -1
Query: 150 LTPQKEYYGCLV-----------------THPFNSYTPILGSILDTC 61
++P +E+YGCL+ T P + ILGS+L C
Sbjct: 674 MSPSQEHYGCLIKLLAGDGQLDEALETIFTMPSHPDEHILGSLLAAC 720
>gb|ACZ98537.1| PPR motif protein [Malus domestica]
Length = 751
Score = 55.1 bits (131), Expect(3) = 3e-15
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = -2
Query: 350 PAFAQCKCGLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAE 171
P + G H QA EALA Y+ + +G+KPD++TFT L +CS+ +V EG +LF +
Sbjct: 539 PIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVD 598
Query: 170 M 168
M
Sbjct: 599 M 599
Score = 50.1 bits (118), Expect(3) = 3e-15
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANV 326
GY++R IA S+ DMY KCG + RVF+++ DK+LP++NA +
Sbjct: 496 GYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMI 545
Score = 23.5 bits (49), Expect(3) = 3e-15
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 17/49 (34%)
Frame = -1
Query: 150 LTPQKEYYGCLVT-----------------HPFNSYTPILGSILDTCMD 55
+ P E+YGC+V+ P+ ILGS+L C +
Sbjct: 605 INPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACRE 653
>ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic isoform X1 [Solanum tuberosum]
ref|XP_015166321.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic isoform X1 [Solanum tuberosum]
Length = 844
Score = 53.5 bits (127), Expect(3) = 4e-15
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 326 GLLFHRQAKEALAFYKHMHGKGMKPDDMTFTVLLSSCSNVGLVDEGFKLFAEM 168
G H +A EALA +K + +G++PD +TFT +LSSC + GL+ EG +F +M
Sbjct: 634 GYALHGRAIEALALFKRLCKEGVEPDSITFTSVLSSCCHAGLIKEGLDVFYDM 686
Score = 52.4 bits (124), Expect(3) = 4e-15
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -3
Query: 475 GYILRQGFLSYFSIAKSVKDMYTKCGSIKLSNRVFEIVSDKDLPLHNANVDYY 317
GYILRQ +A S+ DMYTKCGS+ + +F+++ +K+L L+NA + Y
Sbjct: 583 GYILRQKIPLSLPVATSLVDMYTKCGSLNCAKCIFDLIPEKELALYNAMISGY 635
Score = 22.3 bits (46), Expect(3) = 4e-15
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 150 LTPQKEYYGCLVT 112
+ P+ E+YGC++T
Sbjct: 692 MKPRVEHYGCMIT 704