BLASTX nr result

ID: Ophiopogon25_contig00024258 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00024258
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63191.1| hypothetical protein 20.t00043 [Asparagus officin...    50   2e-08
gb|ONK65039.1| uncharacterized protein A4U43_C07F32850 [Asparagu...    54   1e-06

>gb|ABD63191.1| hypothetical protein 20.t00043 [Asparagus officinalis]
          Length = 316

 Score = 49.7 bits (117), Expect(2) = 2e-08
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = +3

Query: 156 MVTTAGKTVFSEEMVVLQFDKVAVGTSVESLVIEFDQV*RKHSL 287
           M T  G+TV S EMVV QFD+V V T+VESL+IEFDQ   K  L
Sbjct: 1   MATIVGETVSSTEMVVGQFDEVVVETTVESLIIEFDQAKYKEYL 44



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 265 KYEENIPSISSKDATMRKCRKMVRDAKPRQARTLGSQRPARALTGGFHSP 414
           KY+E + + SS     RKC ++VR  +P+ A     +   RA+ GG  SP
Sbjct: 39  KYKEYLSTSSSNGNASRKCHRVVRVTRPQVAEASMPEDSTRAMAGGSISP 88


>gb|ONK65039.1| uncharacterized protein A4U43_C07F32850 [Asparagus officinalis]
          Length = 113

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 156 MVTTAGKTVFSEEMVVLQFDKVAVGTSVESLVIEFDQ 266
           M TT G+ V S EMVV QFD+VAVGT+VESL IEFDQ
Sbjct: 1   MATTVGEVVSSNEMVVAQFDEVAVGTTVESLEIEFDQ 37


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