BLASTX nr result

ID: Ophiopogon25_contig00024101 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00024101
         (682 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008776846.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...    59   2e-06

>ref|XP_008776846.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein NUP205
           [Phoenix dactylifera]
          Length = 1866

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -1

Query: 145 KCYILDFRGAIVPRQAVVFRERLSLSHCLALSVL 44
           +CY+LDFRGAIV R+AVV RERLSLSHCL LSVL
Sbjct: 192 ECYVLDFRGAIVQRRAVVSRERLSLSHCLVLSVL 225


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