BLASTX nr result

ID: Ophiopogon25_contig00023989 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023989
         (1272 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagu...    91   1e-15
ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...    91   1e-15
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni...    85   8e-14
ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA...    82   4e-13
gb|OAY73545.1| putative RNA polymerase II subunit B1 CTD phospha...    81   1e-12
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni...    80   2e-12
ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD ph...    80   2e-12
gb|PON98274.1| RNA polymerase II subunit B1 CTD phosphatase RPAP...    78   1e-11
gb|PON69610.1| RNA polymerase II subunit B1 CTD phosphatase RPAP...    78   1e-11
gb|OWM62882.1| hypothetical protein CDL15_Pgr020176 [Punica gran...    73   1e-11
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]    77   2e-11
ref|XP_023891791.1| putative RNA polymerase II subunit B1 CTD ph...    76   4e-11
gb|POE61564.1| putative rna polymerase ii subunit b1 ctd phospha...    76   4e-11
gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cord...    76   5e-11
ref|XP_021278276.1| putative RNA polymerase II subunit B1 CTD ph...    76   6e-11
ref|XP_010097327.1| putative RNA polymerase II subunit B1 CTD ph...    75   7e-11
ref|XP_020581624.1| putative RNA polymerase II subunit B1 CTD ph...    75   1e-10
ref|XP_016692246.1| PREDICTED: putative RNA polymerase II subuni...    74   2e-10
ref|XP_021830454.1| putative RNA polymerase II subunit B1 CTD ph...    74   2e-10
gb|OMO82815.1| hypothetical protein CCACVL1_11738 [Corchorus cap...    74   2e-10

>gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagus officinalis]
          Length = 705

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALPSF+MKQWQV+VLLFIEALSVHRL SLAPQMTSR++LLH V
Sbjct: 623  DTMSFVDALPSFRMKQWQVIVLLFIEALSVHRLPSLAPQMTSRNLLLHTV 672



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 293 VLNAAQVTSEEYETMRDHIMPLGRLPQFSMQSGG 192
           VLNAA+V+ EEYETMRD +MPLGRLPQFSMQSGG
Sbjct: 672 VLNAARVSIEEYETMRDLMMPLGRLPQFSMQSGG 705


>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
            phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALPSF+MKQWQV+VLLFIEALSVHRL SLAPQMTSR++LLH V
Sbjct: 654  DTMSFVDALPSFRMKQWQVIVLLFIEALSVHRLPSLAPQMTSRNLLLHTV 703



 Score = 60.8 bits (146), Expect = 4e-06
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 293 VLNAAQVTSEEYETMRDHIMPLGRLPQFSMQSGG 192
           VLNAA+V+ EEYETMRD +MPLGRLPQFSMQSGG
Sbjct: 703 VLNAARVSIEEYETMRDLMMPLGRLPQFSMQSGG 736


>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Elaeis guineensis]
          Length = 681

 Score = 84.7 bits (208), Expect = 8e-14
 Identities = 40/57 (70%), Positives = 49/57 (85%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKVGIPTSTT 1101
            DTMSFVDALPSF+++QWQV+VLLF++ALSVHRL  LAP MT+R+MLLHKV  P   +
Sbjct: 599  DTMSFVDALPSFRIRQWQVIVLLFLDALSVHRLPPLAPHMTNRNMLLHKVLNPAQVS 655


>ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1
            CTD phosphatase RPAP2 homolog [Phoenix dactylifera]
          Length = 689

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKVGIPTSTT 1101
            DTMSFVD LPSF+++QW+V+VLLF++ALSVHRL SLAP MT+++MLLHKV  P   +
Sbjct: 607  DTMSFVDTLPSFRIRQWRVIVLLFLDALSVHRLPSLAPHMTNKNMLLHKVLNPAQVS 663


>gb|OAY73545.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP, partial
            [Ananas comosus]
          Length = 708

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFV+ALPSFK +QWQV+VLLF++ALS HRL +LAP MT+++MLLHKV
Sbjct: 631  DTMSFVEALPSFKTRQWQVIVLLFLDALSAHRLPALAPHMTNKNMLLHKV 680


>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKVGIPTSTT 1101
            DTMSFVDALPSFK++QWQVVVLLF++ALSVHRL SLA ++T+  +LLHKV  P   +
Sbjct: 590  DTMSFVDALPSFKLEQWQVVVLLFLDALSVHRLPSLASEVTNMDLLLHKVLNPAEVS 646


>ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Ananas comosus]
          Length = 673

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 37/50 (74%), Positives = 45/50 (90%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFV ALPSFK +QWQV+VLLF++ALS HRL +LAP MT+++MLLHKV
Sbjct: 596  DTMSFVKALPSFKTRQWQVIVLLFLDALSAHRLPALAPHMTNKNMLLHKV 645


>gb|PON98274.1| RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein
            [Trema orientalis]
          Length = 705

 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALP F+MKQWQVVVLLFIEALSV+RL +L   MT+R ML HKV
Sbjct: 623  DTMSFVDALPPFRMKQWQVVVLLFIEALSVYRLPALTLHMTNRRMLFHKV 672


>gb|PON69610.1| RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein
            [Parasponia andersonii]
          Length = 705

 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALP F+MKQWQVVVLLFIEALSV+RL +L   MT+R ML HKV
Sbjct: 623  DTMSFVDALPPFRMKQWQVVVLLFIEALSVYRLPALTLHMTNRRMLFHKV 672


>gb|OWM62882.1| hypothetical protein CDL15_Pgr020176 [Punica granatum]
 gb|PKI44542.1| hypothetical protein CRG98_035080 [Punica granatum]
          Length = 169

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALPSF+ KQWQVV+LLF++ALSV R+ +L   MT+R  LLHKV
Sbjct: 87   DTMSFVDALPSFRAKQWQVVLLLFVDALSVSRIPALTAHMTNRRALLHKV 136


>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALPSF+MKQWQV+VLLFI+ALSV R+ +L P MTSR ML  KV
Sbjct: 577  DTMSFVDALPSFRMKQWQVIVLLFIDALSVCRIPALTPHMTSRRMLFPKV 626


>ref|XP_023891791.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Quercus suber]
          Length = 663

 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTM+FVDALP+F+MKQWQV+VLLFIEALSV R+ +L P MT+R ML+ KV
Sbjct: 581  DTMTFVDALPAFRMKQWQVIVLLFIEALSVCRIPALTPHMTNRRMLMQKV 630


>gb|POE61564.1| putative rna polymerase ii subunit b1 ctd phosphatase rpap2 like
            [Quercus suber]
          Length = 681

 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTM+FVDALP+F+MKQWQV+VLLFIEALSV R+ +L P MT+R ML+ KV
Sbjct: 599  DTMTFVDALPAFRMKQWQVIVLLFIEALSVCRIPALTPHMTNRRMLMQKV 648


>gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cordata]
          Length = 649

 Score = 75.9 bits (185), Expect = 5e-11
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSF DALPSF+MKQW V+VLLF++ALSV R+  L P MTS  MLLHKV
Sbjct: 567  DTMSFTDALPSFRMKQWHVIVLLFVDALSVCRIPGLTPHMTSTRMLLHKV 616


>ref|XP_021278276.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Herrania umbratica]
          Length = 685

 Score = 75.9 bits (185), Expect = 6e-11
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFV+ALP+F+MKQWQV+VLLFI+ALSV R+ +L P MT+  MLLHKV
Sbjct: 603  DTMSFVEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHMTNGRMLLHKV 652


>ref|XP_010097327.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Morus notabilis]
 gb|EXB67559.1| hypothetical protein L484_006008 [Morus notabilis]
          Length = 695

 Score = 75.5 bits (184), Expect = 7e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFVDALP F+MKQWQV++LLF+EALSV+RL +L P M  R +L HKV
Sbjct: 613  DTMSFVDALPPFRMKQWQVIILLFLEALSVYRLPALTPHMMYRRVLFHKV 662


>ref|XP_020581624.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Phalaenopsis equestris]
          Length = 721

 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSF+DA+PSFK +QW VVVLLFIEALSVHRLL LAP   SR M L ++
Sbjct: 643  DTMSFMDAIPSFKTRQWHVVVLLFIEALSVHRLLGLAPHFMSRGMQLQQM 692


>ref|XP_016692246.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium hirsutum]
          Length = 388

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSFV+ALP+F+MKQWQV+VLL I+ALSV R+ +L P MT+  MLLHKV
Sbjct: 306  DTMSFVEALPAFRMKQWQVIVLLLIDALSVCRIPALTPHMTNGRMLLHKV 355


>ref|XP_021830454.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Prunus avium]
          Length = 711

 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 33/50 (66%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            +TMSF+DA+P+F+MKQWQV+VLLF+E LSV R+ +L P MT+R ML HKV
Sbjct: 629  NTMSFIDAIPAFRMKQWQVIVLLFLEGLSVCRIPALTPHMTNRRMLFHKV 678


>gb|OMO82815.1| hypothetical protein CCACVL1_11738 [Corchorus capsularis]
          Length = 693

 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 1271 DTMSFVDALPSFKMKQWQVVVLLFIEALSVHRLLSLAPQMTSRSMLLHKV 1122
            DTMSF++ALP+F+MKQWQV+VLLFI+ALSV R+ +L P MTS   LLHKV
Sbjct: 611  DTMSFMEALPAFRMKQWQVIVLLFIDALSVSRIPALTPYMTSGRTLLHKV 660