BLASTX nr result
ID: Ophiopogon25_contig00023767
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00023767
(672 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp... 161 6e-42
ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ana... 125 2e-34
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 117 8e-33
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 115 3e-32
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu] 114 7e-32
ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aeg... 114 7e-32
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 116 3e-31
gb|ERN11375.1| hypothetical protein AMTR_s00176p00039530 [Ambore... 115 6e-31
ref|XP_011625384.1| probable RNA-dependent RNA polymerase 1 isof... 115 6e-31
gb|OVA04184.1| RNA-dependent RNA polymerase [Macleaya cordata] 112 7e-31
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 107 7e-31
ref|XP_020534926.1| RNA-dependent RNA polymerase 1-like [Jatroph... 114 9e-31
gb|OVA04183.1| RNA-dependent RNA polymerase [Macleaya cordata] 115 9e-31
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 118 2e-30
gb|KDP38127.1| hypothetical protein JCGZ_04770 [Jatropha curcas] 111 2e-30
ref|XP_020534925.1| RNA-dependent RNA polymerase 1 isoform X1 [J... 111 4e-30
ref|XP_012072321.1| RNA-dependent RNA polymerase 1 isoform X2 [J... 111 4e-30
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 109 1e-29
ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isof... 125 2e-29
ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isof... 125 2e-29
>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
Length = 1128
Score = 161 bits (408), Expect = 6e-42
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF TSKDA + + + + Y +YLKV+Y RDIVPKPRK+ F+LE LH+GCL
Sbjct: 54 VQFFTSKDAKIVSSLAQQN---FLYGNSYLKVEYAKRDIVPKPRKAWFILEDTELHIGCL 110
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
ISE TLGVLWSCT VEVHFGF+MKKISF L QG+QS+KL+LS+ESIWDIQQ ++ SQ
Sbjct: 111 ISENTLGVLWSCTGVEVHFGFNMKKISFLLTQGSQSHKLELSFESIWDIQQHSLPSENSQ 170
Query: 656 FLVIQ 670
FLV+Q
Sbjct: 171 FLVVQ 175
Score = 66.6 bits (161), Expect = 5e-09
Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP--ISDKQRC*HYIQ 336
MG KTV VSGFP +VTA+ VKNFLE+YTG+GSVFAVKV P IS + R +Q
Sbjct: 1 MGSKTVHVSGFPMNVTADSVKNFLEDYTGEGSVFAVKVRHPKVISTRSRAYALVQ 55
>ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020089661.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 125 bits (315), Expect(2) = 2e-34
Identities = 67/125 (53%), Positives = 86/125 (68%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQFLT A I + + L+ YLK +YM RDIVPKPR SLFV+E A LH GC
Sbjct: 54 VQFLTEGQAKQIIYLADNSLLRC--QGYYLKARYMERDIVPKPRSSLFVVERATLHFGCP 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S+ + VLWS +DV V+FGF+++KI FFL++G+ YKL+LSYESIW+IQ S Q SQ
Sbjct: 112 VSKRSFCVLWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQ 171
Query: 656 FLVIQ 670
FL+ Q
Sbjct: 172 FLLFQ 176
Score = 48.5 bits (114), Expect(2) = 2e-34
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKTV + GFP +A+ KN LE + DGSV+A+K+ P
Sbjct: 1 MGGKTVNIHGFPLHASADYAKNILEGFISDGSVYALKLRQP 41
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 117 bits (294), Expect(2) = 8e-33
Identities = 61/125 (48%), Positives = 79/125 (63%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF + A+ + NA L+ YLK +Y RDIVP+PR ++F L+ A LH GCL
Sbjct: 54 VQFQSEAHASLVLNAAQRNALRS--GSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCL 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+ E L VLWS TDV V FGF MK+I F L ++ YKL+LSYESIW+IQ P + +
Sbjct: 112 LKERVLSVLWSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKK 171
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 172 FLLIQ 176
Score = 51.2 bits (121), Expect(2) = 8e-33
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKT++VSGFP V A+ VK+ LE G G+VFAVK+ P
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPP 41
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 115 bits (289), Expect(2) = 3e-32
Identities = 60/125 (48%), Positives = 79/125 (63%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF + A+ + NA L+ YLK +Y RDIVP+PR ++F L+ A LH GCL
Sbjct: 54 VQFQSEAHASLVLNAAQRNALRS--GSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCL 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+ E L VLWS T+V V FGF MK+I F L ++ YKL+LSYESIW+IQ P + +
Sbjct: 112 LKERVLSVLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKK 171
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 172 FLLIQ 176
Score = 51.2 bits (121), Expect(2) = 3e-32
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKT++VSGFP V A+ VK+ LE G G+VFAVK+ P
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPP 41
>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
Length = 1252
Score = 114 bits (285), Expect(2) = 7e-32
Identities = 59/125 (47%), Positives = 79/125 (63%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF + A+ + NA L+ +LK +Y RDIVP+PR ++F L+ A LH GCL
Sbjct: 54 VQFQSEAHASLVLNAARRNALRS--GSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCL 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+ E L VLWS T+V V FGF MK+I F L ++ YKL+LSYESIW+IQ P + +
Sbjct: 112 LREKVLSVLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKK 171
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 172 FLLIQ 176
Score = 51.6 bits (122), Expect(2) = 7e-32
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKT++VSGFP V A+ VK+ LE G G+VFA+K+ P
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPP 41
>ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
tauschii]
ref|XP_020170072.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
tauschii]
Length = 1116
Score = 114 bits (285), Expect(2) = 7e-32
Identities = 59/125 (47%), Positives = 79/125 (63%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF + A+ + NA L+ +LK +Y RDIVP+PR ++F L+ A LH GCL
Sbjct: 54 VQFQSEAHASLVLNAARRNALRS--GSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCL 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+ E L VLWS T+V V FGF MK+I F L ++ YKL+LSYESIW+IQ P + +
Sbjct: 112 LREKALSVLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKK 171
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 172 FLLIQ 176
Score = 51.6 bits (122), Expect(2) = 7e-32
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKT++VSGFP V A+ VK+ LE G G+VFA+K+ P
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPP 41
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
ref|XP_019704927.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
ref|XP_019704928.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
Length = 1129
Score = 116 bits (290), Expect(2) = 3e-31
Identities = 62/125 (49%), Positives = 83/125 (66%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T++ A +I + +Y LKV+ + RDIVPKPR SLF+LE A LH G
Sbjct: 54 VQFTTNRHAESIAHKH-----LVWYDGFVLKVRDVERDIVPKPRTSLFILENATLHFGSP 108
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S+ VLWS DV+V+FGF+++KI FFL++G SYK +L+YESIW+IQ S Q Q
Sbjct: 109 VSQNKFSVLWSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQ 168
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 169 FLLIQ 173
Score = 47.8 bits (112), Expect(2) = 3e-31
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MG KT + GFP TA VK FLE +TG+G++FA+K P
Sbjct: 1 MGSKTTNIHGFPTTATAPSVKAFLEVHTGEGTIFALKFRLP 41
>gb|ERN11375.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 115 bits (287), Expect(2) = 6e-31
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF TSK A IY+ L P ++ +Y+ V+YM DIVP PR + VLE+ L+ G
Sbjct: 125 VQFTTSKSAEVIYS-LAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQ 183
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
ISE + +LWS T+V+V FGF +KKI F+LA YKLDL YE+IW IQ R P + ++
Sbjct: 184 ISEESFAILWSNTNVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTR 243
Query: 656 FLVIQ 670
+LV+Q
Sbjct: 244 YLVLQ 248
Score = 47.8 bits (112), Expect(2) = 6e-31
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 181 GGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GG+TV+VSGFP+ AE VK FLE+ TG G+V+ +K+
Sbjct: 74 GGRTVQVSGFPQGTCAEAVKKFLESITGFGTVYHLKI 110
>ref|XP_011625384.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Amborella
trichopoda]
Length = 1140
Score = 115 bits (287), Expect(2) = 6e-31
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF TSK A IY+ L P ++ +Y+ V+YM DIVP PR + VLE+ L+ G
Sbjct: 55 VQFTTSKSAEVIYS-LAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQ 113
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
ISE + +LWS T+V+V FGF +KKI F+LA YKLDL YE+IW IQ R P + ++
Sbjct: 114 ISEESFAILWSNTNVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTR 173
Query: 656 FLVIQ 670
+LV+Q
Sbjct: 174 YLVLQ 178
Score = 47.8 bits (112), Expect(2) = 6e-31
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 181 GGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GG+TV+VSGFP+ AE VK FLE+ TG G+V+ +K+
Sbjct: 4 GGRTVQVSGFPQGTCAEAVKKFLESITGFGTVYHLKI 40
>gb|OVA04184.1| RNA-dependent RNA polymerase [Macleaya cordata]
Length = 1138
Score = 112 bits (280), Expect(2) = 7e-31
Identities = 56/125 (44%), Positives = 79/125 (63%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF++++ A + + +N+ P + +Y +YLK Q RDI+PKPR S+F L ALH GC
Sbjct: 54 VQFISNQKAEFMSSLINQ-PQRLYYGNSYLKAQDKERDIIPKPRVSMFHLTVPALHFGCQ 112
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S +W DV V FGF ++K+ F L+ + YKL+LSYESIWDIQ R P +
Sbjct: 113 VSNERFFNVWKARDVSVDFGFGLRKLYFLLSYSDVEYKLELSYESIWDIQLRRPGNPNTS 172
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 173 FLLIQ 177
Score = 50.1 bits (118), Expect(2) = 7e-31
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXPISDK 312
G+T+ + GFP VTAE VKNFLEN+TG +V+A+++ P +++
Sbjct: 2 GRTIHIYGFPSYVTAESVKNFLENHTGKETVYALQIGKPKNNR 44
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
ref|XP_010275424.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
ref|XP_010275500.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
ref|XP_010275583.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
ref|XP_010275643.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
ref|XP_010275710.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
nucifera]
Length = 1136
Score = 107 bits (268), Expect(2) = 7e-31
Identities = 59/125 (47%), Positives = 75/125 (60%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF TS A+ I + +N + +Y YLKV+ + RDIV KPR SL LE LH GC
Sbjct: 53 VQFTTSGSADVITSLVNR---RLYYGTHYLKVRDVERDIVAKPRMSLLSLEHTTLHFGCQ 109
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S VLW DV V F F ++++ FFL+Q YKL LSYE+IW IQ R P Q +
Sbjct: 110 VSPEKFSVLWKGADVAVRFEFGLRRLHFFLSQFPIDYKLGLSYENIWQIQLRHPRGQNKK 169
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 170 FLLIQ 174
Score = 54.7 bits (130), Expect(2) = 7e-31
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GKT+ +SGFP +VTAE VK LE YTGDG+V+A+KV
Sbjct: 2 GKTIHLSGFPANVTAEAVKELLERYTGDGTVYALKV 37
>ref|XP_020534926.1| RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1072
Score = 114 bits (285), Expect(2) = 9e-31
Identities = 56/125 (44%), Positives = 81/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T++DA I + N+ + +Y +YLK + + DIVPKPR L ++ LH GC
Sbjct: 51 VQFQTARDAELIISLTNK---RLWYGTSYLKARTLDNDIVPKPRTFLHSMDHITLHFGCH 107
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
IS+ VLW+ T+V V+FGF M+K+ FFL+ G YKLDLSYE++W I+ CP + +
Sbjct: 108 ISKEKFSVLWTGTNVLVNFGFGMRKLHFFLSHGQMDYKLDLSYENVWQIELHCPRGRSVK 167
Query: 656 FLVIQ 670
+L+IQ
Sbjct: 168 YLLIQ 172
Score = 47.8 bits (112), Expect(2) = 9e-31
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GKT+ V GFP VT + VK FLE+++G+G+VFA+K+
Sbjct: 2 GKTIHVYGFPSHVTVDEVKKFLESHSGEGTVFAMKI 37
>gb|OVA04183.1| RNA-dependent RNA polymerase [Macleaya cordata]
Length = 758
Score = 115 bits (289), Expect(2) = 9e-31
Identities = 58/125 (46%), Positives = 80/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF++++ A + + +N L Y Y +YLKVQ RDI+PKPR S+F L+ ALH GC
Sbjct: 54 VQFISNQKAELMSSLINRPKLLY-YGNSYLKVQNKERDIIPKPRVSMFHLKVPALHFGCQ 112
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S+ + +W DV V FGF ++K+ F L+ YKL+LSYESIWDIQ R P +
Sbjct: 113 VSDESFFNVWKARDVSVDFGFGLRKLYFLLSYSGVEYKLELSYESIWDIQLRSPENPNTP 172
Query: 656 FLVIQ 670
FL+IQ
Sbjct: 173 FLLIQ 177
Score = 46.2 bits (108), Expect(2) = 9e-31
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
G+T+ + GFP VTAE VKNFLEN+TG +V+A+++
Sbjct: 2 GRTIHIYGFPSYVTAELVKNFLENHTGKETVYALQI 37
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 118 bits (295), Expect(2) = 2e-30
Identities = 63/125 (50%), Positives = 81/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF +D ++ + + L Y YL V+ M RDI+PKPRK LFVLE LH GC
Sbjct: 50 VQFPRREDVQDLFVMIQQGKLSY--DGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCP 107
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+S+ L VL S DV+V+FGF M+KI F L+ G SYKL+L+YESIW+I+ S Q SQ
Sbjct: 108 LSQKRLSVLRSMEDVKVNFGFEMRKIYFLLSHGIHSYKLELAYESIWEIRLHRSSVQNSQ 167
Query: 656 FLVIQ 670
FLV+Q
Sbjct: 168 FLVVQ 172
Score = 42.7 bits (99), Expect(2) = 2e-30
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
M KT+++S FP TA+ V FLE YTG+GSV A+K+
Sbjct: 1 MTSKTIQISRFPSYATAKQVTVFLEKYTGEGSVIALKL 38
>gb|KDP38127.1| hypothetical protein JCGZ_04770 [Jatropha curcas]
Length = 196
Score = 111 bits (278), Expect(2) = 2e-30
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T++DA I + N+ + Y +YLK + + DIVPKPR L ++ LH GC
Sbjct: 68 VQFQTARDAELIISLTNK---RLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQ 124
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
IS+ VLW+ T+V V+FGF M+K+ FFL+ G YKL+LSYE++W ++ CP + +
Sbjct: 125 ISKEKFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVK 184
Query: 656 FLVIQ 670
+L+IQ
Sbjct: 185 YLLIQ 189
Score = 49.3 bits (116), Expect(2) = 2e-30
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +1
Query: 163 SFT*TMGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
+F ++ GKT++V GFP VT + VK FLE+++G+G+VFA+K+
Sbjct: 12 NFRISLMGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKI 54
>ref|XP_020534925.1| RNA-dependent RNA polymerase 1 isoform X1 [Jatropha curcas]
Length = 1151
Score = 111 bits (278), Expect(2) = 4e-30
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T++DA I + N+ + Y +YLK + + DIVPKPR L ++ LH GC
Sbjct: 75 VQFQTARDAELIISLTNK---RLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQ 131
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
IS+ VLW+ T+V V+FGF M+K+ FFL+ G YKL+LSYE++W ++ CP + +
Sbjct: 132 ISKEKFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVK 191
Query: 656 FLVIQ 670
+L+IQ
Sbjct: 192 YLLIQ 196
Score = 48.5 bits (114), Expect(2) = 4e-30
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GKT++V GFP VT + VK FLE+++G+G+VFA+K+
Sbjct: 26 GKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKI 61
>ref|XP_012072321.1| RNA-dependent RNA polymerase 1 isoform X2 [Jatropha curcas]
Length = 1127
Score = 111 bits (278), Expect(2) = 4e-30
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T++DA I + N+ + Y +YLK + + DIVPKPR L ++ LH GC
Sbjct: 51 VQFQTARDAELIISLTNK---RLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQ 107
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
IS+ VLW+ T+V V+FGF M+K+ FFL+ G YKL+LSYE++W ++ CP + +
Sbjct: 108 ISKEKFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVK 167
Query: 656 FLVIQ 670
+L+IQ
Sbjct: 168 YLLIQ 172
Score = 48.5 bits (114), Expect(2) = 4e-30
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1
Query: 184 GKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKV 291
GKT++V GFP VT + VK FLE+++G+G+VFA+K+
Sbjct: 2 GKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKI 37
>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
polymerase 1 [Brachypodium distachyon]
Length = 1117
Score = 109 bits (272), Expect(2) = 1e-29
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Frame = +2
Query: 296 VQFLTSKDANTIYNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGCL 475
VQF T + A+ + NA L YLKV+ RDIVP+PR ++F L A L CL
Sbjct: 54 VQFQTEEYASLVENAAXRNVLST--ESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCL 111
Query: 476 ISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRSQ 655
+ E L VLWS TDV V FGF MKKI F+L + YKL+LSYESIW+IQ P A RSQ
Sbjct: 112 LKENVLSVLWSGTDVSVEFGFDMKKIYFYLE--CRKYKLELSYESIWEIQLHRPPAYRSQ 169
Query: 656 --FLVIQ 670
FL+IQ
Sbjct: 170 KKFLLIQ 176
Score = 49.3 bits (116), Expect(2) = 1e-29
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +1
Query: 178 MGGKTVKVSGFPRDVTAEGVKNFLENYTGDGSVFAVKVXXP 300
MGGKT+++SGFP +V A+ VK+ LE G G+V+AVK+ P
Sbjct: 1 MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPP 41
>ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 125 bits (315), Expect = 2e-29
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Frame = +2
Query: 296 VQFLTSKDANTI-YNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGC 472
VQFLT A I Y A N + Y YLKV+YM RDIVPKPR SLFV+E A LH GC
Sbjct: 54 VQFLTEGQAKRIIYLADNSLLMCQGY---YLKVRYMKRDIVPKPRASLFVVEHATLHFGC 110
Query: 473 LISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRS 652
+ + + VLWS +DV V+FGF+++KI FF++QG+ YKL+LSYESIW+IQ S Q S
Sbjct: 111 PVLKRSFCVLWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGS 170
Query: 653 QFLVIQ 670
QFL+ Q
Sbjct: 171 QFLLFQ 176
>ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 125 bits (315), Expect = 2e-29
Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Frame = +2
Query: 296 VQFLTSKDANTI-YNALNETPLQYFYPKTYLKVQYMYRDIVPKPRKSLFVLEAAALHLGC 472
VQFLT A I Y A N + Y YLKV+YM RDIVPKPR SLFV+E A LH GC
Sbjct: 68 VQFLTEGQAKRIIYLADNSLLMCQGY---YLKVRYMKRDIVPKPRASLFVVEHATLHFGC 124
Query: 473 LISEVTLGVLWSCTDVEVHFGFHMKKISFFLAQGNQSYKLDLSYESIWDIQQRCPSAQRS 652
+ + + VLWS +DV V+FGF+++KI FF++QG+ YKL+LSYESIW+IQ S Q S
Sbjct: 125 PVLKRSFCVLWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGS 184
Query: 653 QFLVIQ 670
QFL+ Q
Sbjct: 185 QFLLFQ 190