BLASTX nr result
ID: Ophiopogon25_contig00023562
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00023562
(382 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagu... 97 1e-20
ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus offi... 97 1e-20
ref|XP_009407776.1| PREDICTED: rRNA biogenesis protein RRP5 [Mus... 82 2e-15
gb|OAY66732.1| rRNA biogenesis protein rrp5 [Ananas comosus] 81 3e-15
ref|XP_020093093.1| rRNA biogenesis protein RRP5, partial [Anana... 79 1e-14
ref|XP_019709884.1| PREDICTED: rRNA biogenesis protein RRP5 isof... 75 4e-13
ref|XP_010934562.1| PREDICTED: rRNA biogenesis protein RRP5 isof... 75 4e-13
ref|XP_010934559.1| PREDICTED: rRNA biogenesis protein RRP5 isof... 75 4e-13
ref|XP_015898902.1| PREDICTED: rRNA biogenesis protein RRP5 [Ziz... 71 1e-11
ref|XP_008789163.1| PREDICTED: rRNA biogenesis protein RRP5 [Pho... 70 3e-11
gb|PON82424.1| Polyribonucleotide nucleotidyltransferase [Trema ... 66 7e-10
gb|PON46626.1| Polyribonucleotide nucleotidyltransferase [Parasp... 65 9e-10
ref|XP_024188307.1| rRNA biogenesis protein RRP5 [Rosa chinensis] 65 1e-09
gb|PRQ44383.1| putative suppressor of forked, tetratricopeptide-... 65 1e-09
ref|XP_008387226.1| PREDICTED: rRNA biogenesis protein RRP5 [Mal... 65 2e-09
ref|XP_011467137.1| PREDICTED: protein RRP5 homolog [Fragaria ve... 64 2e-09
gb|OWM82627.1| hypothetical protein CDL15_Pgr002202 [Punica gran... 64 3e-09
gb|PKI32813.1| hypothetical protein CRG98_046806 [Punica granatum] 64 3e-09
ref|XP_020701262.1| rRNA biogenesis protein RRP5 isoform X2 [Den... 64 4e-09
ref|XP_020701261.1| rRNA biogenesis protein RRP5 isoform X1 [Den... 64 4e-09
>gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagus officinalis]
Length = 930
Score = 96.7 bits (239), Expect = 1e-20
Identities = 67/126 (53%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Frame = -3
Query: 377 AHGEKTKMKSHNQNPIKSLALKSQXXXXXXXXXXXXXXXXXXXXPLPTSLLVQDDDPEFP 198
AHGEK K KS QNP LA KSQ L TSLLVQDDDPEFP
Sbjct: 3 AHGEKKK-KSQKQNP-NHLAPKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPEFP 59
Query: 197 RGGGSFLSRK-EAEARVETDAEFEREESDFXXXXXXXXXXXXXXKTSANERDDELGSLFG 21
RGGGS LSRK EAEAR E +AEFE+E+ +F K A DDELGSLFG
Sbjct: 60 RGGGSVLSRKEEAEARAEAEAEFEKEKKEF-RKGKDRRKKKNERKKPAKGADDELGSLFG 118
Query: 20 DGVTGR 3
+GVTGR
Sbjct: 119 EGVTGR 124
>ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus officinalis]
Length = 1915
Score = 96.7 bits (239), Expect = 1e-20
Identities = 67/126 (53%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Frame = -3
Query: 377 AHGEKTKMKSHNQNPIKSLALKSQXXXXXXXXXXXXXXXXXXXXPLPTSLLVQDDDPEFP 198
AHGEK K KS QNP LA KSQ L TSLLVQDDDPEFP
Sbjct: 3 AHGEKKK-KSQKQNP-NHLAPKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPEFP 59
Query: 197 RGGGSFLSRK-EAEARVETDAEFEREESDFXXXXXXXXXXXXXXKTSANERDDELGSLFG 21
RGGGS LSRK EAEAR E +AEFE+E+ +F K A DDELGSLFG
Sbjct: 60 RGGGSVLSRKEEAEARAEAEAEFEKEKKEF-RKGKDRRKKKNERKKPAKGADDELGSLFG 118
Query: 20 DGVTGR 3
+GVTGR
Sbjct: 119 EGVTGR 124
>ref|XP_009407776.1| PREDICTED: rRNA biogenesis protein RRP5 [Musa acuminata subsp.
malaccensis]
Length = 1920
Score = 81.6 bits (200), Expect = 2e-15
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LPTSLLV+ DDP+FPRGGGS LSR+E A+AR E +A+FEREES + K
Sbjct: 45 LPTSLLVEADDPDFPRGGGSLLSRQEQADARAEAEAQFEREES-YSRKGKGKARKKKGLK 103
Query: 65 TSANERDDELGSLFGDGVTGR 3
S+ + D++LGSLFGDG+TG+
Sbjct: 104 GSSLDFDNDLGSLFGDGITGK 124
>gb|OAY66732.1| rRNA biogenesis protein rrp5 [Ananas comosus]
Length = 2022
Score = 81.3 bits (199), Expect = 3e-15
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP+SLL+ DDDP+FPRGGGS LSRKE AEAR E ++EFEREE +
Sbjct: 58 LPSSLLIADDDPDFPRGGGSVLSRKEAAEARAEAESEFEREERS-----KGKKKKKKGAR 112
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D++ GSLFG+GVTG+
Sbjct: 113 RSLGEADEDFGSLFGEGVTGK 133
>ref|XP_020093093.1| rRNA biogenesis protein RRP5, partial [Ananas comosus]
Length = 1891
Score = 79.3 bits (194), Expect = 1e-14
Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP SLL DDDP+FPRGGGS LSRKE AEAR E ++EFEREE +
Sbjct: 25 LPPSLLTADDDPDFPRGGGSVLSRKEAAEARAEAESEFEREERS-----KGKKKKKKGAR 79
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D++ GSLFG+GVTG+
Sbjct: 80 RSLGEADEDFGSLFGEGVTGK 100
>ref|XP_019709884.1| PREDICTED: rRNA biogenesis protein RRP5 isoform X3 [Elaeis
guineensis]
Length = 1898
Score = 75.1 bits (183), Expect = 4e-13
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP+SLLVQDDDP+FPRGG S L+R+E AEAR E + EFERE +
Sbjct: 41 LPSSLLVQDDDPDFPRGGASVLTREEIAEARAEAEEEFERESK-----KSKDTRKNKGAQ 95
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D+ GSLFGDGVTG+
Sbjct: 96 KSLAEAVDDFGSLFGDGVTGK 116
>ref|XP_010934562.1| PREDICTED: rRNA biogenesis protein RRP5 isoform X2 [Elaeis
guineensis]
Length = 1928
Score = 75.1 bits (183), Expect = 4e-13
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP+SLLVQDDDP+FPRGG S L+R+E AEAR E + EFERE +
Sbjct: 41 LPSSLLVQDDDPDFPRGGASVLTREEIAEARAEAEEEFERESK-----KSKDTRKNKGAQ 95
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D+ GSLFGDGVTG+
Sbjct: 96 KSLAEAVDDFGSLFGDGVTGK 116
>ref|XP_010934559.1| PREDICTED: rRNA biogenesis protein RRP5 isoform X1 [Elaeis
guineensis]
Length = 1930
Score = 75.1 bits (183), Expect = 4e-13
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP+SLLVQDDDP+FPRGG S L+R+E AEAR E + EFERE +
Sbjct: 41 LPSSLLVQDDDPDFPRGGASVLTREEIAEARAEAEEEFERESK-----KSKDTRKNKGAQ 95
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D+ GSLFGDGVTG+
Sbjct: 96 KSLAEAVDDFGSLFGDGVTGK 116
>ref|XP_015898902.1| PREDICTED: rRNA biogenesis protein RRP5 [Ziziphus jujuba]
Length = 1927
Score = 70.9 bits (172), Expect = 1e-11
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS+LS+KE E R E DAEFE EE D + +
Sbjct: 46 ALQLEDDVPDFPRGGGSYLSQKERDEIRAEVDAEFEAEERDLKHTKEKKKKKRKNLEMKS 105
Query: 56 NERDDELGSLFGDGVTGR 3
E +D+ GSLFG G+TG+
Sbjct: 106 REAEDDFGSLFGAGITGK 123
>ref|XP_008789163.1| PREDICTED: rRNA biogenesis protein RRP5 [Phoenix dactylifera]
Length = 1922
Score = 69.7 bits (169), Expect = 3e-11
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 LPTSLLVQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXK 66
LP+SLLVQDDDP+FPRGG S L+R+E AEAR E + EF RE K
Sbjct: 41 LPSSLLVQDDDPDFPRGGTSVLTREEIAEARAEAEEEFVRESK-----KSKGGKKKKGTK 95
Query: 65 TSANERDDELGSLFGDGVTGR 3
S E D+ GSLFG+GVTG+
Sbjct: 96 KSLAEAVDDFGSLFGNGVTGK 116
>gb|PON82424.1| Polyribonucleotide nucleotidyltransferase [Trema orientalis]
Length = 1900
Score = 65.9 bits (159), Expect = 7e-10
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS LSRKE E R E DAEFE EE + +
Sbjct: 44 ALQLEDDVPDFPRGGGSSLSRKERDEIRAEVDAEFEAEEREL------KTKKKRKSLRNT 97
Query: 56 NERDDELGSLFGDGVTGR 3
N+ +D+LGSLFG G+ G+
Sbjct: 98 NQEEDDLGSLFGGGIKGK 115
>gb|PON46626.1| Polyribonucleotide nucleotidyltransferase [Parasponia andersonii]
Length = 1897
Score = 65.5 bits (158), Expect = 9e-10
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS LSRKE E R E DAEFE EE + +
Sbjct: 44 ALQLEDDVPDFPRGGGSSLSRKERDEIRAEVDAEFEAEEREL------KTKKKRKSLRNT 97
Query: 56 NERDDELGSLFGDGVTGR 3
++ DD+LGSLFG G+ G+
Sbjct: 98 SQEDDDLGSLFGGGIKGK 115
>ref|XP_024188307.1| rRNA biogenesis protein RRP5 [Rosa chinensis]
Length = 1929
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS L+RKE E R E DAEFE EE + +
Sbjct: 46 ALQLEDDVPDFPRGGGSSLNRKERDEIRAEVDAEFEAEEREM-----KKKGKKKRVPKDS 100
Query: 56 NERDDELGSLFGDGVTGR 3
+DE+GSLFGDG+TG+
Sbjct: 101 LVNEDEMGSLFGDGITGK 118
>gb|PRQ44383.1| putative suppressor of forked, tetratricopeptide-like helical
domain, nucleic acid-binding protein [Rosa chinensis]
Length = 1961
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS L+RKE E R E DAEFE EE + +
Sbjct: 46 ALQLEDDVPDFPRGGGSSLNRKERDEIRAEVDAEFEAEEREM-----KKKGKKKRVPKDS 100
Query: 56 NERDDELGSLFGDGVTGR 3
+DE+GSLFGDG+TG+
Sbjct: 101 LVNEDEMGSLFGDGITGK 118
>ref|XP_008387226.1| PREDICTED: rRNA biogenesis protein RRP5 [Malus domestica]
Length = 1029
Score = 64.7 bits (156), Expect = 2e-09
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SLLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSA 57
+L ++DD P+FPRGGGS L+R+E E R E DAEFE EE + K S
Sbjct: 44 ALQLEDDVPDFPRGGGSALNRQERDEIRAEVDAEFEAEEREL-----KKRKKKGMQKNSV 98
Query: 56 NERDDELGSLFGDGVTGR 3
++D+LGSLFGDG++G+
Sbjct: 99 ATKEDDLGSLFGDGISGK 116
>ref|XP_011467137.1| PREDICTED: protein RRP5 homolog [Fragaria vesca subsp. vesca]
Length = 1930
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 LLVQDDDPEFPRGGGSFLSRKEA-EARVETDAEFEREESDFXXXXXXXXXXXXXXKTSAN 54
L ++DD P+FPRGGGS L+RKE E R E DAEFE EE + +
Sbjct: 43 LQLEDDVPDFPRGGGSSLNRKERDEIRAEVDAEFEAEERELKKGGKKNKRKMPKESLA-- 100
Query: 53 ERDDELGSLFGDGVTGR 3
+D++GSLFGDG+TG+
Sbjct: 101 -HEDDMGSLFGDGITGK 116
>gb|OWM82627.1| hypothetical protein CDL15_Pgr002202 [Punica granatum]
Length = 1906
Score = 63.9 bits (154), Expect = 3e-09
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -3
Query: 224 VQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXKTSANER 48
+QDD P+FPRGGGSFLSRKE E E D E E EE+ + N
Sbjct: 44 LQDDMPDFPRGGGSFLSRKEREEVHAEVDRELEAEEN------ASKSNKKKNMRKKVNAT 97
Query: 47 DDELGSLFGDGVTGR 3
+D+LGSLFGDG++G+
Sbjct: 98 EDDLGSLFGDGISGK 112
>gb|PKI32813.1| hypothetical protein CRG98_046806 [Punica granatum]
Length = 1909
Score = 63.9 bits (154), Expect = 3e-09
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -3
Query: 224 VQDDDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXXKTSANER 48
+QDD P+FPRGGGSFLSRKE E E D E E EE+ + N
Sbjct: 44 LQDDMPDFPRGGGSFLSRKEREEVHAEVDRELEAEEN------ASKSNKKKNMRKKVNAT 97
Query: 47 DDELGSLFGDGVTGR 3
+D+LGSLFGDG++G+
Sbjct: 98 EDDLGSLFGDGISGK 112
>ref|XP_020701262.1| rRNA biogenesis protein RRP5 isoform X2 [Dendrobium catenatum]
gb|PKU74083.1| 30S ribosomal protein S1, chloroplastic [Dendrobium catenatum]
Length = 1918
Score = 63.5 bits (153), Expect = 4e-09
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 PTSLLVQD--DDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXX 69
P S+L QD D+PEFPRGGG LSR+E AEAR E + EFERE+
Sbjct: 40 PASVLFQDQDDEPEFPRGGGRVLSREEVAEARAEAEEEFEREQG--LASRGRKQQKKKAT 97
Query: 68 KTSANERDDELGSLFGDGVTGR 3
S +DE GSLFG G+TG+
Sbjct: 98 VKSYKFGEDEWGSLFGQGITGK 119
>ref|XP_020701261.1| rRNA biogenesis protein RRP5 isoform X1 [Dendrobium catenatum]
Length = 1919
Score = 63.5 bits (153), Expect = 4e-09
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 PTSLLVQD--DDPEFPRGGGSFLSRKE-AEARVETDAEFEREESDFXXXXXXXXXXXXXX 69
P S+L QD D+PEFPRGGG LSR+E AEAR E + EFERE+
Sbjct: 40 PASVLFQDQDDEPEFPRGGGRVLSREEVAEARAEAEEEFEREQG--LASRGRKQQKKKAT 97
Query: 68 KTSANERDDELGSLFGDGVTGR 3
S +DE GSLFG G+TG+
Sbjct: 98 VKSYKFGEDEWGSLFGQGITGK 119