BLASTX nr result

ID: Ophiopogon25_contig00023548 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023548
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259196.1| FACT complex subunit SSRP1-like [Asparagus o...    56   2e-06
gb|ONK76572.1| uncharacterized protein A4U43_C03F29710 [Asparagu...    56   2e-06
ref|XP_010915112.1| PREDICTED: FACT complex subunit SSRP1-A-like...    55   8e-06

>ref|XP_020259196.1| FACT complex subunit SSRP1-like [Asparagus officinalis]
 ref|XP_020259197.1| FACT complex subunit SSRP1-like [Asparagus officinalis]
          Length = 498

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = -2

Query: 361 ASVLDNADDDAVDPHLERIKNAAGGXXXXXXXXDFVADK 245
           ASVL+N DDDAVDPHLERIKNAAGG        DFVADK
Sbjct: 305 ASVLENDDDDAVDPHLERIKNAAGGEDSDEEDEDFVADK 343


>gb|ONK76572.1| uncharacterized protein A4U43_C03F29710 [Asparagus officinalis]
          Length = 625

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = -2

Query: 361 ASVLDNADDDAVDPHLERIKNAAGGXXXXXXXXDFVADK 245
           ASVL+N DDDAVDPHLERIKNAAGG        DFVADK
Sbjct: 432 ASVLENDDDDAVDPHLERIKNAAGGEDSDEEDEDFVADK 470


>ref|XP_010915112.1| PREDICTED: FACT complex subunit SSRP1-A-like [Elaeis guineensis]
          Length = 649

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/39 (71%), Positives = 29/39 (74%)
 Frame = -2

Query: 361 ASVLDNADDDAVDPHLERIKNAAGGXXXXXXXXDFVADK 245
           A+VL NADDDAVDPHLERIKN AGG        DFVADK
Sbjct: 452 AAVLQNADDDAVDPHLERIKNEAGGEESDEEDEDFVADK 490


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