BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023481
         (774 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   197   8e-54
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   179   1e-47
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   179   2e-47
gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagu...   163   4e-47
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   174   6e-46
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   165   9e-46
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo...   171   1e-45
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar...   173   1e-45
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   171   7e-45
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         171   1e-44
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   166   2e-44
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     169   3e-44
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     169   6e-44
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   166   5e-43
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     166   5e-43
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   166   5e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   165   1e-42
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   164   2e-42
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     164   3e-42
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   161   2e-41

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  197 bits (500), Expect = 8e-54
 Identities = 123/262 (46%), Positives = 153/262 (58%), Gaps = 14/262 (5%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDE--------TFREKSGVSQQVEP 591
            PRA++A+FMG   GVK ++LW     K IISRDVTFDE        T ++K+G  +QVE 
Sbjct: 451  PRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFDESTMLGKVTTEQKKNGTPKQVEF 510

Query: 590  *K-----TTDPEPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQ 426
             +       D E +  +D ++     E  V +Q P                         
Sbjct: 511  ERKIVFPANDEEKTPMVDEES----DEEEVHIQEPPQ----------------------- 543

Query: 425  LPESESIAARKPKRKTRLPSRYDNMIVAYALPVESVEDSVPTTFREAEASTEAKMWEEAM 246
              + ESIA RKPKR T +P+RY +M V+YA PV S  D +PTT+ EA   +E   W  AM
Sbjct: 544  --QLESIALRKPKRTTIMPARYVDM-VSYASPVAS--DDIPTTYIEAVKGSEEDKWRSAM 598

Query: 245  SDEMHSLHKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGI 69
            S+EM SL +N TW+   LPKG + IGCKWVY KK G S    V Y+ARLVAKG AQ EGI
Sbjct: 599  SEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGI 658

Query: 68   DYNEVFSPVVKHSSIQILLALV 3
            DYNEVFSPVVKHSSI++LLALV
Sbjct: 659  DYNEVFSPVVKHSSIRVLLALV 680


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  179 bits (454), Expect = 1e-47
 Identities = 106/256 (41%), Positives = 152/256 (59%), Gaps = 8/256 (3%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLW--DPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTT 579
            PRA++ +F+G+ +GVK ++LW  DPV  KFIISRDVTFDE+   R  +   ++ E  +  
Sbjct: 1184 PRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMG 1243

Query: 578  DPEPSQRLDVDALPSYPERSVSVQVP-IDVQDVXXXXXXXXXXXXXEPVQGQLPESE--S 408
            D    ++++       P    SVQ   ++VQD                 + + P+ +  S
Sbjct: 1244 DHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSD---------------EDESPQEKPYS 1288

Query: 407  IAARKPKRKTRLPSRYDNMIVAYALPVESVEDSVPTTFREAEASTEAKMWEEAMSDEMHS 228
            IA  + KR+ +   RY N+ V++AL V       P+++ EA    E+  W  AMS+E+ S
Sbjct: 1289 IATGRTKRQIKPNPRYANL-VSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIES 1347

Query: 227  LHKNHTWEQVELPKGNRVIGCKWVYVKKKGSPS-HLV*YRARLVAKGLAQHEGIDYNEVF 51
            LHKNHTWE V+ P   +++GCKWV+ KK+G        ++ARLVAKG  Q EGIDYNEVF
Sbjct: 1348 LHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVF 1407

Query: 50   SPVVKHSSIQILLALV 3
            SPVVKHSSI++LLA+V
Sbjct: 1408 SPVVKHSSIRVLLAMV 1423


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  179 bits (454), Expect = 2e-47
 Identities = 106/256 (41%), Positives = 152/256 (59%), Gaps = 8/256 (3%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLW--DPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTT 579
            PRA++ +F+G+ +GVK ++LW  DPV  KFIISRDVTFDE+   R  +   ++ E  +  
Sbjct: 1163 PRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMG 1222

Query: 578  DPEPSQRLDVDALPSYPERSVSVQVP-IDVQDVXXXXXXXXXXXXXEPVQGQLPESE--S 408
            D    ++++       P    SVQ   ++VQD                 + + P+ +  S
Sbjct: 1223 DHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSD---------------EDESPQEKPYS 1267

Query: 407  IAARKPKRKTRLPSRYDNMIVAYALPVESVEDSVPTTFREAEASTEAKMWEEAMSDEMHS 228
            IA  + KR+ +   RY N+ V++AL V       P+++ EA    E+  W  AMS+E+ S
Sbjct: 1268 IATGRTKRQIKPNPRYANL-VSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIES 1326

Query: 227  LHKNHTWEQVELPKGNRVIGCKWVYVKKKGSPS-HLV*YRARLVAKGLAQHEGIDYNEVF 51
            LHKNHTWE V+ P   +++GCKWV+ KK+G        ++ARLVAKG  Q EGIDYNEVF
Sbjct: 1327 LHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVF 1386

Query: 50   SPVVKHSSIQILLALV 3
            SPVVKHSSI++LLA+V
Sbjct: 1387 SPVVKHSSIRVLLAMV 1402


>gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagus officinalis]
          Length = 162

 Score =  163 bits (413), Expect = 4e-47
 Identities = 81/137 (59%), Positives = 104/137 (75%)
 Frame = -2

Query: 413 ESIAARKPKRKTRLPSRYDNMIVAYALPVESVEDSVPTTFREAEASTEAKMWEEAMSDEM 234
           ESIAA +P+   R  + Y+++IVAYAL +E V+D VP+TFREAE+S+ +  W EAM +E+
Sbjct: 22  ESIAANRPRMVIRRLTTYNDVIVAYALSIEVVDDMVPSTFREAESSSNSIRWMEAMEEEI 81

Query: 233 HSLHKNHTWEQVELPKGNRVIGCKWVYVKKKGSPSHLV*YRARLVAKGLAQHEGIDYNEV 54
            SL KN TW+  +LPKG + IGCKWVY+KK GS    + Y+ + VAKG AQ EGIDYN++
Sbjct: 82  RSLQKNDTWKLAKLPKGKKAIGCKWVYMKKDGSSIGDIRYKDKFVAKGYAQLEGIDYNKI 141

Query: 53  FSPVVKHSSIQILLALV 3
           FS VVKHSSIQILLALV
Sbjct: 142 FSSVVKHSSIQILLALV 158


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  174 bits (442), Expect = 6e-46
 Identities = 102/254 (40%), Positives = 152/254 (59%), Gaps = 6/254 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDETFREKSGVSQQVEP*KTTDPEP 567
            PRA++ VF+G+  GVK F++W P + + I+SR+V FDE+            P   T  +P
Sbjct: 655  PRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDES------------PLLRTIVKP 702

Query: 566  SQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPES--ESIAARK 393
            +   +  +L    ++ V  QV  +  D+               +   +P    +SIA  +
Sbjct: 703  TTTSETGSL----DKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDR 758

Query: 392  PKRK-TRLPSRYD-NMIVAYALPV-ESVEDSVPTTFREAEASTEAKMWEEAMSDEMHSLH 222
            P+R   R P+RY    +V YAL V E V+ S P+T++EA  S++++ W  AM DEM SLH
Sbjct: 759  PRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLH 818

Query: 221  KNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFSP 45
            KN TW+ V  P G ++I CKWV+ KK+G SP+  V Y+AR+VA+G  Q EG+DYNE+FSP
Sbjct: 819  KNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSP 878

Query: 44   VVKHSSIQILLALV 3
            VV+H+SI++LLA+V
Sbjct: 879  VVRHTSIRVLLAIV 892


>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  165 bits (417), Expect = 9e-46
 Identities = 102/232 (43%), Positives = 130/232 (56%), Gaps = 10/232 (4%)
 Frame = -2

Query: 668 KFIISRDVTFDETF---------REKSGVSQQVEP*KTTDPEPSQRLDVDALPSYPERSV 516
           K I SRDVTFDE+          ++  G S+QVE  +     P+Q  D +    YP    
Sbjct: 4   KVIFSRDVTFDESAMVNKVTEDTKQNEGASKQVEF-EGKFIFPTQEADEETNEDYPLEGE 62

Query: 515 SVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARKPKRKTRLPSRYDNMIVAYA 336
            V+                      P Q    + ESIA  +PKR    P R   +I   A
Sbjct: 63  PVE--------------------EIPTQEPQQQLESIATSRPKRTITKPVR---LIETVA 99

Query: 335 LPVESVEDSVPTTFREAEASTEAKMWEEAMSDEMHSLHKNHTWEQVELPKGNRVIGCKWV 156
                V D VPTT+++A  S+E   W  AM++EM SL++NHTW+   LPKG + IGCKWV
Sbjct: 100 CATSIVADDVPTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWV 159

Query: 155 YVKKKGSPSHL-V*YRARLVAKGLAQHEGIDYNEVFSPVVKHSSIQILLALV 3
           + KK+G P+ + V Y+ARLVAKG AQ EGIDYNEVFSPVVKHSSI+I+LALV
Sbjct: 160 FAKKEGFPNQVDVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALV 211


>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 595

 Score =  171 bits (432), Expect = 1e-45
 Identities = 103/256 (40%), Positives = 147/256 (57%), Gaps = 8/256 (3%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PR+R+ +FMG+  GVK +++W P + K I+SRDV FDE+  F  K  V        T + 
Sbjct: 290  PRSRKCLFMGYGDGVKGYRIWSPSEKKVILSRDVIFDESHLFHPKLEVPITA----THNS 345

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESI---A 402
             P Q   V  + S  E++    +     +              E  Q   P+S  +    
Sbjct: 346  HPPQ---VGKVESISEKTEDKDLLDKFSEASQEEEQSENSSANESHQNAEPDSIQLNPGI 402

Query: 401  ARKPKRKTRLPSRYD-NMIVAYAL-PVESVEDSVPTTFREAEASTEAKMWEEAMSDEMHS 228
            ++KPKR  + P RY    +  YAL   E ++   PTT++EA +  EA+ W  AM +EM S
Sbjct: 403  SQKPKRVIKPPERYGFEDMATYALHAAEEIDSDEPTTYKEAISHPEAEKWILAMREEMES 462

Query: 227  LHKNHTWEQVELPKGNRVIGCKWVYVKKK-GSPSHLV*YRARLVAKGLAQHEGIDYNEVF 51
            L+KN TW+ VELPKG  V+GCKW+Y KK   S    + Y+ARLVAKG +Q EG+D+NE+F
Sbjct: 463  LYKNQTWKLVELPKGRHVVGCKWIYKKKSIFSEKEEIRYKARLVAKGFSQKEGVDFNEIF 522

Query: 50   SPVVKHSSIQILLALV 3
            SPVV+H+SI++LLA+V
Sbjct: 523  SPVVRHTSIRVLLAIV 538


>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
          Length = 1034

 Score =  173 bits (439), Expect = 1e-45
 Identities = 88/145 (60%), Positives = 115/145 (79%), Gaps = 1/145 (0%)
 Frame = -2

Query: 434 QGQLPESESIAARKPKRKTRLPSRYDNMIVAYALPVESVEDSVPTTFREAEASTEAKMWE 255
           Q  L + +SIA R+P+R+ R+P+R+D+M VAYAL +   +D VP+T+ +A +++++  W+
Sbjct: 509 QELLQQHDSIAYRRPRREIRMPARFDDM-VAYALLI--ADDDVPSTYTKARSNSDSVKWK 565

Query: 254 EAMSDEMHSLHKNHTWEQVELPKGNRVIGCKWVYVKKKGSP-SHLV*YRARLVAKGLAQH 78
           +AM++EM SLHKN TWE V LPKG + IGCKWVY KK+G P  + V Y+ARLVAKG AQ 
Sbjct: 566 QAMNEEMQSLHKNRTWELVTLPKGKKAIGCKWVYAKKEGFPDKNEVRYKARLVAKGYAQK 625

Query: 77  EGIDYNEVFSPVVKHSSIQILLALV 3
           EGIDYNEVFSPVVKHSSIQILLALV
Sbjct: 626 EGIDYNEVFSPVVKHSSIQILLALV 650


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  171 bits (434), Expect = 7e-45
 Identities = 104/253 (41%), Positives = 148/253 (58%), Gaps = 5/253 (1%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDETFREKSGVSQQVEP*KTTDPEP 567
            PR+++A+F+G+  GVK +KLW    +KF++SRDVTFDE        S  ++P K      
Sbjct: 1248 PRSKKAIFVGYVDGVKGYKLWCLSLLKFVVSRDVTFDE--------SSILDPRKV----- 1294

Query: 566  SQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARKPK 387
            S  L      S  E +  V++P+++                E +    P +  IA  + K
Sbjct: 1295 SMEL------SRNENNEQVELPVELTKKRDQETQSDESKDAEELASNEPYT--IAKGRDK 1346

Query: 386  RKTRLPSRY---DNMIV-AYALPVESVEDSVPTTFREAEASTEAKMWEEAMSDEMHSLHK 219
            R+ R P R    +N+I  A+    E ++D  P+++ EA +  +A  W+ AM +EM SLH+
Sbjct: 1347 RRIRKPERLIEQENLIAQAFVAAEEEIKDLEPSSYIEATSCKDAAQWQLAMMEEMESLHR 1406

Query: 218  NHTWEQVELPKGNRVIGCKWVYVKKKGSPS-HLV*YRARLVAKGLAQHEGIDYNEVFSPV 42
            N TW  V+ PKG R +GCKWVY KK+G P      ++ARLVAKG +Q EGIDYNE+FSPV
Sbjct: 1407 NETWVLVKRPKGMRTVGCKWVYKKKEGIPEVEAARFKARLVAKGFSQKEGIDYNEIFSPV 1466

Query: 41   VKHSSIQILLALV 3
            VKHSSI++LLALV
Sbjct: 1467 VKHSSIRVLLALV 1479


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  171 bits (432), Expect = 1e-44
 Identities = 105/255 (41%), Positives = 144/255 (56%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  G+K +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 459  PRAIKCIFLGYPSGMKGYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASV 518

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P     +++  VP+ ++D                   Q      IA  K
Sbjct: 519  QVEHLISSGHAPEKENVAINQDVPV-IEDSDSSTV-------------QQSPKRFIAKDK 564

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR T+ P RY  +  IVAYAL V E +E +  P+T+ EA  S +   W  AM DEM SL
Sbjct: 565  PKRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESL 624

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +KKG SPS    Y+ARLVAKG +Q  GID+N+VFS
Sbjct: 625  EKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLVAKGYSQIPGIDFNDVFS 684

Query: 47   PVVKHSSIQILLALV 3
            PVVKHSSI+ LL++V
Sbjct: 685  PVVKHSSIRTLLSIV 699


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  166 bits (420), Expect = 2e-44
 Identities = 105/262 (40%), Positives = 152/262 (58%), Gaps = 14/262 (5%)
 Frame = -2

Query: 746 PRARRAVFMGFKRGVKDFKLWDPVD---MKFIISRDVTFDET--FREKSGVSQQVEP*KT 582
           PRA + +F+G+  GVK ++LW   +    K +ISRDVTF+E+  F +K  V + +   K+
Sbjct: 56  PRAMKCIFLGYPTGVKGYRLWCTENNRTKKIVISRDVTFNESAMFGQKEEV-ENLAGNKS 114

Query: 581 TDPEPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIA 402
           T+    Q+++ +   S  E    V+   +VQ+                      E +SIA
Sbjct: 115 TNKGVHQKVEFEVEDSNKENLNPVEQSSNVQE----------------------EPQSIA 152

Query: 401 ARKPKRKTRLPSRY-------DNMIVAYALPV-ESVEDSVPTTFREAEASTEAKMWEEAM 246
            R+ +R+ R P+RY       D   VAYAL V E+++   P +++EA  S EA  W  AM
Sbjct: 153 TRRTRREIRKPTRYADVTNVVDTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAM 212

Query: 245 SDEMHSLHKNHTWEQVELPKGNRVIGCKWVYVKKKGSPS-HLV*YRARLVAKGLAQHEGI 69
            +EM SL KN TWE V LP+G + +GCKWV  +K+G P      ++ARLVAKG +Q EGI
Sbjct: 213 DEEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGI 272

Query: 68  DYNEVFSPVVKHSSIQILLALV 3
           DY+EVFSPVVKH +I++LLA+V
Sbjct: 273 DYHEVFSPVVKHKTIRVLLAMV 294


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  169 bits (429), Expect = 3e-44
 Identities = 105/255 (41%), Positives = 146/255 (57%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 649  PRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV 708

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P   + +++   P+ ++D                +  Q P+  SIA  K
Sbjct: 709  QVEHLISSGHAPEKEDVAINQDAPV-IED------------SDSSIVHQSPK-RSIAKDK 754

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR  + P RY  +  IVAYAL V E +E +  P+T+ EA  S +   W  AM DEM SL
Sbjct: 755  PKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESL 814

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +K+G SPS    Y+ARLVAKG +Q  GID+N+VFS
Sbjct: 815  EKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFS 874

Query: 47   PVVKHSSIQILLALV 3
            PVVKHSSI+ LL +V
Sbjct: 875  PVVKHSSIRTLLGIV 889


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  169 bits (427), Expect = 6e-44
 Identities = 108/253 (42%), Positives = 142/253 (56%), Gaps = 5/253 (1%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDETFREKSGVSQQVEP*KTTDPEP 567
            PRA + +F+G+  GVKD+KLW P   K +ISR+V F E+      V    +P      E 
Sbjct: 556  PRAIKCIFLGYPSGVKDYKLWCPKTKKVVISRNVVFHES------VMLHDKPSTNVPVES 609

Query: 566  SQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARKPK 387
             ++  V       E  +S     + +DV                  Q P+  SIA  KPK
Sbjct: 610  QEKASVQV-----EHLISSGHAPEKEDVAINQDASVIEDSDSSAVQQSPK-RSIAKDKPK 663

Query: 386  RKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSLHK 219
            R  + P RY  +  IVAYAL V E +E +  P+T+ EA  S     W  AM DEM SL K
Sbjct: 664  RNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEK 723

Query: 218  NHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFSPV 42
            NHTWE V+LPK  + I CKW++ +KKG SPS    Y+ARLVAKG +Q  GID+N+VFSPV
Sbjct: 724  NHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPV 783

Query: 41   VKHSSIQILLALV 3
            +KHSSI+ LL++V
Sbjct: 784  LKHSSIRTLLSIV 796


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  166 bits (420), Expect = 5e-43
 Identities = 103/255 (40%), Positives = 145/255 (56%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  + T  
Sbjct: 419  PRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKTSV 478

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P   + +++   P+ +QD                +  Q P+  SIA  K
Sbjct: 479  QVEHLISSGHAPEKEDVAINQDAPV-IQD------------SDSSIVHQSPK-RSIAKDK 524

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR  + P RY  +  IVAYAL V E +E +  P+ + EA  S +   W   M DEM SL
Sbjct: 525  PKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESL 584

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +K+G SPS    Y+ARLVAKG +Q   ID+N+VFS
Sbjct: 585  EKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFS 644

Query: 47   PVVKHSSIQILLALV 3
            P+VKHSSI+ LL++V
Sbjct: 645  PIVKHSSIRTLLSIV 659


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  166 bits (420), Expect = 5e-43
 Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 712  PRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV 771

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P     +++   P+ ++D                   Q     SIA  K
Sbjct: 772  QVEHLISSGHAPEKENVAINQDAPV-IEDSDSSIV-------------QQSSKRSIAKDK 817

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR  + P RY  +  IVAYAL V E +E +  P+T+ EA  S +   W  AM DEM SL
Sbjct: 818  PKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESL 877

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +K+G SPS    Y+ARLVAKG +Q  GID+N+VFS
Sbjct: 878  KKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFS 937

Query: 47   PVVKHSSIQILLALV 3
            P++KHSSI+ LL +V
Sbjct: 938  PIMKHSSIRTLLGIV 952


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  166 bits (420), Expect = 5e-43
 Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 712  PRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV 771

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P     +++   P+ ++D                   Q     SIA  K
Sbjct: 772  QVEHLISSGHAPEKENVAINQDAPV-IEDSDSSIV-------------QQSSKRSIAKDK 817

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR  + P RY  +  IVAYAL V E +E +  P+T+ EA  S +   W  AM DEM SL
Sbjct: 818  PKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESL 877

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +K+G SPS    Y+ARLVAKG +Q  GID+N+VFS
Sbjct: 878  KKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFS 937

Query: 47   PVVKHSSIQILLALV 3
            P++KHSSI+ LL +V
Sbjct: 938  PIMKHSSIRTLLGIV 952


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  165 bits (417), Expect = 1e-42
 Identities = 108/269 (40%), Positives = 151/269 (56%), Gaps = 21/269 (7%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDM--KFIISRDVTFDET--------FREKSGVSQQV 597
            PRA + +F+G+  GVK ++LW   D   KFIISRDVTFDE+        F + +G S+  
Sbjct: 776  PRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSK-- 833

Query: 596  EP*KTTDPEPSQRLD--VDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQL 423
                 TD   +Q+++  VDA         S + P+  Q+                     
Sbjct: 834  -----TDLGANQKVEFEVDAPMENGVDDTSEEQPVIDQN--------------------- 867

Query: 422  PESESIAARKPKRKTRLPSRYDNMI-------VAYALPV-ESVEDSVPTTFREAEASTEA 267
             +S+SIAA +P+R+ R P RY + +       VA+AL V E +    P +++EA  S ++
Sbjct: 868  -DSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDS 926

Query: 266  KMWEEAMSDEMHSLHKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKG 90
            K W  +M DEM SL KN TWE V LP+G + + CKW++  K G S      Y++RLVAKG
Sbjct: 927  KKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKG 986

Query: 89   LAQHEGIDYNEVFSPVVKHSSIQILLALV 3
             +Q EGIDYNEVFSPVVKH SI++LLA+V
Sbjct: 987  FSQKEGIDYNEVFSPVVKHKSIRVLLAMV 1015


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  164 bits (416), Expect = 2e-42
 Identities = 102/255 (40%), Positives = 146/255 (57%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDET--FREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 884  PRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASV 943

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P   + +++   P+ ++D                +  Q P+  SIA  +
Sbjct: 944  QVEHLISSGHAPEKEDVAINQDEPV-IED------------SNSSIVQQSPK-RSIAKDR 989

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR  + P RY  +  IVAYAL V E +E +  P+T+ EA  S +   W  AM DEM SL
Sbjct: 990  PKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESL 1049

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNHTWE V+LPK  + I CKW++ +K+G S S    Y+ARL+AKG +Q  GID+N+VFS
Sbjct: 1050 EKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFS 1109

Query: 47   PVVKHSSIQILLALV 3
            PVVKHSSI+ LL++V
Sbjct: 1110 PVVKHSSIRTLLSIV 1124


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  164 bits (414), Expect = 3e-42
 Identities = 101/255 (39%), Positives = 146/255 (57%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMKFIISRDVTFDETF--REKSGVSQQVEP*KTTDP 573
            PR  + +F+G+  GVK +KLW P   K +ISR+V F E+    +K   +  VE  +    
Sbjct: 586  PRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVPVESQEKVSV 645

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
            +    +     P   + +++   P+ ++D                +  Q P+  SIA  +
Sbjct: 646  QVEHLISSGHAPEKEDVAINQDAPV-IED------------SDSSIVQQSPK-RSIAKDR 691

Query: 392  PKRKTRLPSRY--DNMIVAYALPV-ESVEDSV-PTTFREAEASTEAKMWEEAMSDEMHSL 225
            PKR T+ P RY  +  IVAYAL V E +E +  P+T+ +A  S +   W  AM DEM SL
Sbjct: 692  PKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESL 751

Query: 224  HKNHTWEQVELPKGNRVIGCKWVYVKKKG-SPSHLV*YRARLVAKGLAQHEGIDYNEVFS 48
             KNH+WE  +LPK  + I CKW++ +K+G SPS    Y+ARLVAKG +Q  GID+N+VFS
Sbjct: 752  EKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFS 811

Query: 47   PVVKHSSIQILLALV 3
            PVVKHSSI+ LL++V
Sbjct: 812  PVVKHSSIRTLLSIV 826


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  161 bits (408), Expect = 2e-41
 Identities = 101/253 (39%), Positives = 142/253 (56%), Gaps = 5/253 (1%)
 Frame = -2

Query: 746  PRARRAVFMGFKRGVKDFKLWDPVDMK--FIISRDVTFDETFREKSGVSQQVEP*KTTDP 573
            PRA + +F+G+ +GVK +KLW     K   IISRDVTF+E    K        P K  + 
Sbjct: 635  PRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQ------TPAKDVEG 688

Query: 572  EPSQRLDVDALPSYPERSVSVQVPIDVQDVXXXXXXXXXXXXXEPVQGQLPESESIAARK 393
                + +V+     PE+S         +++              P QG   ES ++   +
Sbjct: 689  LDQLQFEVEHETLQPEKSKETSSKTAQEEIVHERQNE-------PTQGL--ESYNLVRDR 739

Query: 392  PKRKTRLPSRYDNM-IVAYALPV-ESVEDSVPTTFREAEASTEAKMWEEAMSDEMHSLHK 219
             KR+ + P RY    + A+AL V E + D  P T++EA  S EA  W +A+ +EM SL K
Sbjct: 740  QKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRK 799

Query: 218  NHTWEQVELPKGNRVIGCKWVYVKKKGS-PSHLV*YRARLVAKGLAQHEGIDYNEVFSPV 42
            N TWE V  PK  +V+G KWV+ +K+G+  +    Y+ARLVAKG +Q EG+DYNE+FSPV
Sbjct: 800  NETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPV 859

Query: 41   VKHSSIQILLALV 3
            VKHSSI++LLA V
Sbjct: 860  VKHSSIRLLLAFV 872