BLASTX nr result

ID: Ophiopogon25_contig00023373 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023373
         (555 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65896.1| uncharacterized protein A4U43_C06F2090 [Asparagus...    54   5e-06

>gb|ONK65896.1| uncharacterized protein A4U43_C06F2090 [Asparagus officinalis]
          Length = 141

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -2

Query: 554 SEKVKMELFRKGYTNLLIQMGRGSYIPSKVS 462
           S+KVK ELFRKGYT+L+IQMGRGSY PSK++
Sbjct: 32  SDKVKEELFRKGYTDLVIQMGRGSYFPSKIT 62


Top