BLASTX nr result

ID: Ophiopogon25_contig00023348 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023348
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251734.1| uncharacterized protein LOC109829069 [Aspara...    60   2e-07

>ref|XP_020251734.1| uncharacterized protein LOC109829069 [Asparagus officinalis]
 gb|ONK78932.1| uncharacterized protein A4U43_C01F1130 [Asparagus officinalis]
          Length = 364

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
 Frame = -1

Query: 478 LESLGD-RVLFIHKRFVCSLFADDIGAEGNCIYFTDPYKIEESSHQNSSRVGPIPWSVFN 302
           +ES+GD RV+ IH     SL A DIGA GNCIYF        ++ +NS   G  PW VF+
Sbjct: 286 VESVGDNRVIVIHWVQSVSLLAADIGARGNCIYF--------ATGENS---GQGPWKVFD 334

Query: 301 LGTGKLTESPLSYAP--TPYTHRMFVPSLC 218
           LGT K+T+  L  A         +FVPSLC
Sbjct: 335 LGTRKMTDLQLPSATQFRNLAQLLFVPSLC 364


Top