BLASTX nr result

ID: Ophiopogon25_contig00023326 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00023326
         (430 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250487.1| RRP12-like protein [Asparagus officinalis]         84   4e-16

>ref|XP_020250487.1| RRP12-like protein [Asparagus officinalis]
          Length = 1001

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 52/121 (42%), Positives = 67/121 (55%)
 Frame = +2

Query: 26   PPCKRLKDNSKNIHKGNRWKQQDVISSTNNKRTGGKGGRSQSPKDVVSSISENPFKIQSK 205
            P  K  K +S  I KG RWKQQ  +SS  NK T   G + QS +    S+  NPFK   K
Sbjct: 891  PSRKHSKGSSDAIRKGKRWKQQKDMSSIKNK-TNVDGRKIQSLEGFDPSVPGNPFKKDLK 949

Query: 206  GRNKKRKRNVDEKPNIGNKRMQVKREKDDSNKNLHHASVASKPGGPSKFGKNKRKWGFRG 385
             +NKKRK +VDEKP+  NK M+ +R+KD+            K G  SKF +N+RK G + 
Sbjct: 950  RQNKKRKMSVDEKPDRRNKMMKTERKKDN-----------QKSGAFSKFNRNRRKSGSKA 998

Query: 386  P 388
            P
Sbjct: 999  P 999


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