BLASTX nr result
ID: Ophiopogon25_contig00023000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00023000
(396 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 64 5e-14
ref|XP_020271638.1| uncharacterized protein LOC109846802 [Aspara... 67 4e-12
gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu... 60 5e-11
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 52 4e-08
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 52 4e-08
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 49 8e-08
gb|KYP38715.1| Retrovirus-related Pol polyprotein from transposo... 50 8e-08
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 60 1e-07
gb|KYP69746.1| Retrovirus-related Pol polyprotein from transposo... 52 1e-07
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo... 49 5e-07
gb|PKI43781.1| hypothetical protein CRG98_035792 [Punica granatum] 47 5e-07
ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus dom... 53 6e-07
emb|CDP17738.1| unnamed protein product [Coffea canephora] 50 6e-07
ref|XP_008392199.1| PREDICTED: uncharacterized protein LOC103454... 51 1e-06
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 45 1e-06
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-06
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 49 4e-06
gb|KYP33708.1| Retrovirus-related Pol polyprotein from transposo... 46 4e-06
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 48 7e-06
emb|CDP17739.1| unnamed protein product [Coffea canephora] 46 7e-06
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 64.3 bits (155), Expect(2) = 5e-14
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVEPQKTTD 187
+F+GFKRGVKG+KLWD VDKK++++RDVTFDE K S QVE T +
Sbjct: 579 IFVGFKRGVKGYKLWDLVDKKIVLSRDVTFDEASILKLPSSHQVERDPTKE 629
Score = 40.8 bits (94), Expect(2) = 5e-14
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
CPA+YHVR DKLEPR RKT+
Sbjct: 560 CPAFYHVRTDKLEPRDRKTI 579
>ref|XP_020271638.1| uncharacterized protein LOC109846802 [Asparagus officinalis]
Length = 290
Score = 67.0 bits (162), Expect(2) = 4e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVEPQKTTDP*PSQRVEV 160
+F+GF+ GVKGFKLWDP DKK+II+RDVTFDE + + QQVE + + SQ+VE
Sbjct: 78 VFVGFREGVKGFKLWDPEDKKIIISRDVTFDEAHMMRPQIPQQVEECQISG--ISQQVED 135
Query: 159 D 157
D
Sbjct: 136 D 136
Score = 31.6 bits (70), Expect(2) = 4e-12
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
C AYYHV KL PR RK V
Sbjct: 59 CLAYYHVNDGKLNPRVRKAV 78
>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
Length = 499
Score = 60.5 bits (145), Expect(2) = 5e-11
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVE 205
+F+GF+ VKGFKLWD DKK++I+RDVTFDET+ K V +VE
Sbjct: 448 IFVGFRECVKGFKLWDLQDKKMVISRDVTFDETYMMKPRVPTEVE 492
Score = 34.3 bits (77), Expect(2) = 5e-11
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
CPAY+HV KL PRARK +
Sbjct: 429 CPAYFHVSNRKLNPRARKAI 448
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 52.4 bits (124), Expect(2) = 4e-08
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLW--DPVDKKLIINRDVTFDET--FREKSGVSQQVEPQKTTDP*PSQ 172
+F+G+ +GVKG++LW DPV K II+RDVTFDE+ R + ++ E + D +
Sbjct: 1169 IFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGDHGVEK 1228
Query: 171 RVEVDALPPYP 139
+VE P P
Sbjct: 1229 QVECQVDAPIP 1239
Score = 32.7 bits (73), Expect(2) = 4e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
CPAY HV + KL+PRA+K +
Sbjct: 1150 CPAYAHVNEGKLKPRAKKCI 1169
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 52.4 bits (124), Expect(2) = 4e-08
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLW--DPVDKKLIINRDVTFDET--FREKSGVSQQVEPQKTTDP*PSQ 172
+F+G+ +GVKG++LW DPV K II+RDVTFDE+ R + ++ E + D +
Sbjct: 1190 IFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGDHGVEK 1249
Query: 171 RVEVDALPPYP 139
+VE P P
Sbjct: 1250 QVECQVDAPIP 1260
Score = 32.7 bits (73), Expect(2) = 4e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
CPAY HV + KL+PRA+K +
Sbjct: 1171 CPAYAHVNEGKLKPRAKKCI 1190
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 48.9 bits (115), Expect(2) = 8e-08
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDE--------TFREKSGVSQQVE 205
+FMG GVKG++LW KK II+RDVTFDE T ++K+G +QVE
Sbjct: 457 IFMGIASGVKGYRLWCLETKKTIISRDVTFDESTMLGKVTTEQKKNGTPKQVE 509
Score = 35.0 bits (79), Expect(2) = 8e-08
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
C AYYHV++ KL+PRA+K +
Sbjct: 438 CTAYYHVKESKLDPRAKKAI 457
>gb|KYP38715.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 190
Score = 50.4 bits (119), Expect(2) = 8e-08
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQV 208
LFMG+ GVKG+++W P +KK+I++RDV FDE+ G+ V
Sbjct: 85 LFMGYGDGVKGYRIWSPSEKKIILSRDVVFDESHMFHPGLEFSV 128
Score = 33.5 bits (75), Expect(2) = 8e-08
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARK 341
C AYYHV + KLEPR+RK
Sbjct: 66 CHAYYHVNEGKLEPRSRK 83
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVEPQKTTDP*PSQRVEV 160
+F+G+ +GVKGFKLWDPV KK++++RDV FDE F K S++ E ++ + V
Sbjct: 594 IFVGYSKGVKGFKLWDPVSKKMVLSRDVVFDEQFMLKQ--SRETEVTESAGGSSGKEVIQ 651
Query: 159 DALPPYPER 133
L P P +
Sbjct: 652 VELEPTPNK 660
>gb|KYP69746.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 222
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 19/33 (57%), Positives = 29/33 (87%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDET 241
LFMG++ GVKG+++W P +KK+I++RDV FDE+
Sbjct: 159 LFMGYRHGVKGYRIWSPSEKKIILSRDVVFDES 191
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 388 AYYHVRQDKLEPRARK 341
AYYHV + KLEPR+RK
Sbjct: 142 AYYHVNEGKLEPRSRK 157
>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 48.9 bits (115), Expect(2) = 5e-07
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDET 241
LFMG+ GVKG+++W P ++K+I++RDV FDE+
Sbjct: 294 LFMGYGDGVKGYRIWSPAERKVILSRDVIFDES 326
Score = 32.3 bits (72), Expect(2) = 5e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARK 341
C AYYHV + KLEPR++K
Sbjct: 275 CNAYYHVNEGKLEPRSKK 292
>gb|PKI43781.1| hypothetical protein CRG98_035792 [Punica granatum]
Length = 481
Score = 47.4 bits (111), Expect(2) = 5e-07
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVS---QQVEPQKTTDP*PSQR 169
+F+G VKG++LW P KLII+RDVTFDE+ K S ++VE +K + ++
Sbjct: 401 IFLGHADEVKGYRLWYPDGSKLIISRDVTFDESAMLKLSQSTERKEVEHEKRVES-SGKQ 459
Query: 168 VEVDALP 148
VE+D P
Sbjct: 460 VELDIEP 466
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
CPAY HV++ KL+PRA+K +
Sbjct: 382 CPAYAHVKEGKLDPRAKKCI 401
>ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus domestica]
Length = 863
Score = 52.8 bits (125), Expect(2) = 6e-07
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVS-----QQVEPQK 196
+F+GF GVKG++LW P KKL+I+RDVTFDE K QQVE +K
Sbjct: 139 IFLGFSSGVKGYRLWCPEMKKLVISRDVTFDEEXMXKXSEKNVXDVQQVELEK 191
Score = 28.1 bits (61), Expect(2) = 6e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 391 PAYYHVRQDKLEPRARKTV 335
PAY+HV ++ L+PR +K +
Sbjct: 121 PAYFHVTENXLDPRXKKAI 139
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 50.4 bits (119), Expect(2) = 6e-07
Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDE-------TFREKSGVSQQVE 205
LFMGF GVKG++LW KK II+RDVTFDE T SG QQVE
Sbjct: 694 LFMGFSAGVKGYRLWYLEAKKTIISRDVTFDESVMLNKITQDGTSGTPQQVE 745
Score = 30.4 bits (67), Expect(2) = 6e-07
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 388 AYYHVRQDKLEPRARKTV 335
AYYHV + KL+PRA+K +
Sbjct: 677 AYYHVNESKLDPRAKKAL 694
>ref|XP_008392199.1| PREDICTED: uncharacterized protein LOC103454381 [Malus domestica]
Length = 132
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVE 205
+F+GF GVKG++LW P KKL+I+RD+TFDET +S ++
Sbjct: 54 IFVGFNNGVKGYRLWCPDLKKLVISRDMTFDETSMLQSNSKTSID 98
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 385 YYHVRQDKLEPRARKTV 335
Y+HV Q KL+PRA+K +
Sbjct: 38 YFHVTQSKLDPRAKKAI 54
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 16/33 (48%), Positives = 28/33 (84%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDET 241
+F+G+ GVKGF++W P +K++I++R+V FDE+
Sbjct: 661 VFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDES 693
Score = 34.3 bits (77), Expect(2) = 1e-06
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARKTV 335
C AYYHV + KLEPRA+K V
Sbjct: 642 CTAYYHVSEGKLEPRAKKGV 661
>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 595
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDET 241
LFMG+ GVKG+++W P +KK+I++RDV FDE+
Sbjct: 296 LFMGYGDGVKGYRIWSPSEKKVILSRDVIFDES 328
Score = 30.4 bits (67), Expect(2) = 1e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARK 341
C AYYHV + KL PR+RK
Sbjct: 277 CNAYYHVNEGKLLPRSRK 294
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVEPQKTTDP*PSQ 172
LFMGF GVKG++LW KK II+RDVTFDE S + ++V P+ TD P Q
Sbjct: 608 LFMGFSPGVKGYRLWCLEKKKTIISRDVTFDE-----SVMLKKVNPE-GTDSTPQQ 657
Score = 29.3 bits (64), Expect(2) = 4e-06
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 388 AYYHVRQDKLEPRARKTV 335
AYYHV + KL+PRA+K +
Sbjct: 591 AYYHVIESKLDPRAKKAL 608
>gb|KYP33708.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
gb|KYP40580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 120
Score = 45.8 bits (107), Expect(2) = 4e-06
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDET 241
LFMG+ VKG+++W P ++K+I++RDV FDE+
Sbjct: 85 LFMGYGDAVKGYRIWSPSERKVILSRDVIFDES 117
Score = 32.3 bits (72), Expect(2) = 4e-06
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 394 CPAYYHVRQDKLEPRARK 341
C AYYHV + KLEPR++K
Sbjct: 66 CNAYYHVNEGKLEPRSKK 83
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 48.1 bits (113), Expect(2) = 7e-06
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDETFREKSGVSQQVEPQ 199
LFMGF GVKG++LW KK II+RDVTFDE S + ++V P+
Sbjct: 662 LFMGFSPGVKGYRLWCLEAKKTIISRDVTFDE-----SAMLKKVNPE 703
Score = 29.3 bits (64), Expect(2) = 7e-06
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 388 AYYHVRQDKLEPRARKTV 335
AYYHV + KL+PRA+K +
Sbjct: 645 AYYHVIESKLDPRAKKAL 662
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 46.2 bits (108), Expect(2) = 7e-06
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Frame = -1
Query: 339 LFMGFKRGVKGFKLWDPVDKKLIINRDVTFDE-------TFREKSGVSQQVE 205
+FMG GVKG++LW KK II+RDVTF+E T SG QQVE
Sbjct: 302 IFMGLNAGVKGYRLWCLEAKKTIISRDVTFNESAMLNKVTQNGTSGTPQQVE 353
Score = 31.2 bits (69), Expect(2) = 7e-06
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 388 AYYHVRQDKLEPRARKTV 335
AYYHV + KL+PRA+K +
Sbjct: 285 AYYHVNESKLDPRAKKAI 302