BLASTX nr result

ID: Ophiopogon25_contig00022994 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00022994
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus...    63   6e-09
ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform ...    63   6e-09
ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform ...    63   6e-09
ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform ...    63   6e-09
ref|XP_009112419.1| PREDICTED: uncharacterized protein C1604.06c...    56   2e-06
ref|XP_020096315.1| nucleolar complex protein 4 homolog [Ananas ...    55   4e-06
gb|OAY65227.1| Nucleolar complex protein [Ananas comosus]              54   7e-06
gb|OAY73704.1| Nucleolar complex protein B [Ananas comosus]            54   7e-06

>gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus officinalis]
          Length = 578

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSS------IVTLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           LG QLLSS      + TLLSV SPSSPLKFSLEALIS QSFFVP V  IP K+ A
Sbjct: 34  LGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNEIPSKTLA 88


>ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform X3 [Asparagus
           officinalis]
          Length = 628

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSS------IVTLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           LG QLLSS      + TLLSV SPSSPLKFSLEALIS QSFFVP V  IP K+ A
Sbjct: 34  LGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNEIPSKTLA 88


>ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform X2 [Asparagus
           officinalis]
          Length = 628

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSS------IVTLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           LG QLLSS      + TLLSV SPSSPLKFSLEALIS QSFFVP V  IP K+ A
Sbjct: 34  LGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNEIPSKTLA 88


>ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform X1 [Asparagus
           officinalis]
          Length = 629

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSS------IVTLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           LG QLLSS      + TLLSV SPSSPLKFSLEALIS QSFFVP V  IP K+ A
Sbjct: 34  LGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNEIPSKTLA 88


>ref|XP_009112419.1| PREDICTED: uncharacterized protein C1604.06c-like [Brassica rapa]
          Length = 597

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +2

Query: 20  KSKSTFYFPLKSLFPLVPSLLGDQL-LSSIVTLLSVRSPSSPLKFSLEALISFQSFFVPF 196
           K K    + LK L  L   LL  +  ++++  LLS  SP SP +F +E+L+S QSFF P 
Sbjct: 8   KQKKKENYTLKDLKSLGSDLLSSRAHINNLPLLLSFISPDSPPQFVVESLLSLQSFFTPL 67

Query: 197 VPGIPLKSSAPYDFISRRHR*KMDDDN 277
           +P +P  SS+P     R    + DDD+
Sbjct: 68  LPQLPSSSSSPASSTKRPRSDEQDDDD 94


>ref|XP_020096315.1| nucleolar complex protein 4 homolog [Ananas comosus]
          Length = 634

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
 Frame = +2

Query: 80  LGDQLLSSIV------TLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSAPYDFI 241
           L  +LLSS+        LLS  SPSSPL+F+LE+LIS QSFFVP +P IP  SS      
Sbjct: 38  LAHELLSSLAHVNNLPRLLSFLSPSSPLEFALESLISVQSFFVPLLPEIPAASS------ 91

Query: 242 SRRHR*KMDDDN 277
           S   R K++D++
Sbjct: 92  SSSSRSKLEDED 103


>gb|OAY65227.1| Nucleolar complex protein [Ananas comosus]
          Length = 635

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSSIV------TLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           L  +LLSS+        LLS  SPSSPL+F+LE+LIS QSFFVP +P IP  SS+
Sbjct: 38  LAHELLSSLAHVNNLPRLLSFLSPSSPLEFALESLISVQSFFVPLLPEIPAASSS 92


>gb|OAY73704.1| Nucleolar complex protein B [Ananas comosus]
          Length = 648

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
 Frame = +2

Query: 80  LGDQLLSSIV------TLLSVRSPSSPLKFSLEALISFQSFFVPFVPGIPLKSSA 226
           L  +LLSS+        LLS  SPSSPL+F+LE+LIS QSFFVP +P IP  SS+
Sbjct: 38  LAHELLSSLAHVNNLPRLLSFLSPSSPLEFALESLISVQSFFVPLLPEIPAASSS 92


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