BLASTX nr result

ID: Ophiopogon25_contig00022801 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00022801
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251824.1| pentatricopeptide repeat-containing protein ...    65   7e-09

>ref|XP_020251824.1| pentatricopeptide repeat-containing protein At1g74750-like
           [Asparagus officinalis]
 ref|XP_020251825.1| pentatricopeptide repeat-containing protein At1g74750-like
           [Asparagus officinalis]
 ref|XP_020251826.1| pentatricopeptide repeat-containing protein At1g74750-like
           [Asparagus officinalis]
 gb|ONK81463.1| uncharacterized protein A4U43_C01F29350 [Asparagus officinalis]
          Length = 854

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/89 (44%), Positives = 46/89 (51%)
 Frame = +3

Query: 261 MLRTKQITTLSQCARTFYLSGTRXXXXXXXXXXXXXXXXXLKGRNNNRTDSLLKQHKLXX 440
           MLRTKQI+TLSQCARTFYLSGTR                 +KG+  NRT+          
Sbjct: 1   MLRTKQISTLSQCARTFYLSGTRCGGADGAACSCSDDDSSIKGKTPNRTE---------L 51

Query: 441 XXXXXXXXXXXXLKDAFGSVSSLSPQSRA 527
                       LKDAFG V+ LSPQ+RA
Sbjct: 52  STDVVTKARSPGLKDAFGPVNYLSPQNRA 80


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