BLASTX nr result
ID: Ophiopogon25_contig00022384
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00022384
(512 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6... 88 4e-18
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 86 2e-17
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 85 4e-17
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 83 3e-16
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6... 83 5e-16
gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus imp... 82 8e-16
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6... 82 9e-16
gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlise... 78 1e-14
gb|OTG31934.1| putative RNA polymerase Rpc34-like protein [Helia... 74 2e-14
gb|OAY75962.1| DNA-directed RNA polymerase III subunit RPC6 [Ana... 77 3e-14
ref|XP_011080605.1| DNA-directed RNA polymerase III subunit rpc6... 77 4e-14
ref|XP_020082464.1| DNA-directed RNA polymerase III subunit RPC6... 77 5e-14
ref|XP_020082463.1| DNA-directed RNA polymerase III subunit RPC6... 77 6e-14
gb|OTF85171.1| putative winged helix-turn-helix DNA-binding doma... 76 8e-14
ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6... 76 1e-13
ref|XP_022021339.1| DNA-directed RNA polymerase III subunit RPC6... 76 1e-13
ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III s... 76 2e-13
gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata] 75 2e-13
gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata] 75 2e-13
ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III s... 75 2e-13
>ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
ref|XP_020246713.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
gb|ONK58492.1| uncharacterized protein A4U43_C09F13600 [Asparagus officinalis]
Length = 231
Score = 87.8 bits (216), Expect = 4e-18
Identities = 37/44 (84%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = -1
Query: 509 GPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL-GIDF 381
GP+EGA +SIPCGVCPRI ECTPDG+ISPINCVYYNKWL G+DF
Sbjct: 188 GPKEGAFASIPCGVCPRIHECTPDGVISPINCVYYNKWLGGLDF 231
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 85.9 bits (211), Expect = 2e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
EGP+ GALSSIPCGVCPRI ECTPDGIISP CVYYNKWL ++F
Sbjct: 194 EGPKIGALSSIPCGVCPRIGECTPDGIISPKTCVYYNKWLSLEF 237
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 85.1 bits (209), Expect = 4e-17
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
EGP+ GA SSIPCGVCPRISECTPDGIISP C+YYNKWL ++F
Sbjct: 189 EGPKVGAFSSIPCGVCPRISECTPDGIISPKTCIYYNKWLKLEF 232
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 83.2 bits (204), Expect = 3e-16
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
E PR G LSSIPCGVCPRISECTPDG+ISP CVYYNKWL ++F
Sbjct: 194 EAPRVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLEF 237
>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis
equestris]
Length = 282
Score = 83.2 bits (204), Expect = 5e-16
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = -1
Query: 509 GPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
GP+ G LSS+PCGVCPRI+EC+PDGIISP CVYY KWLG+DF
Sbjct: 240 GPKAGGLSSVPCGVCPRINECSPDGIISPKTCVYYQKWLGLDF 282
>gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus impetiginosus]
Length = 240
Score = 82.0 bits (201), Expect = 8e-16
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
+GPR GA +SIPCG CPRIS CTPDG+ISP CVYYNKWL IDF
Sbjct: 197 KGPRIGAFASIPCGACPRISLCTPDGVISPSTCVYYNKWLNIDF 240
>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
Length = 231
Score = 81.6 bits (200), Expect = 9e-16
Identities = 31/44 (70%), Positives = 39/44 (88%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
+GP+EG S++PCGVCPRI+EC+PDGIISP CVYY KWLG+D+
Sbjct: 188 DGPKEGFFSAVPCGVCPRINECSPDGIISPNTCVYYQKWLGLDY 231
>gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlisea aurea]
Length = 179
Score = 77.8 bits (190), Expect = 1e-14
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -1
Query: 509 GPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
GPR G +SIPCG CPRIS CTPDG+ISP CVYY KWL +DF
Sbjct: 137 GPRIGGFASIPCGACPRISSCTPDGLISPSTCVYYTKWLNLDF 179
>gb|OTG31934.1| putative RNA polymerase Rpc34-like protein [Helianthus annuus]
Length = 78
Score = 74.3 bits (181), Expect = 2e-14
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1
Query: 509 GPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
GP GA++SIPCGVCPRI ECTPDG+ISP CVYY KWL
Sbjct: 38 GPDGGAMASIPCGVCPRIRECTPDGLISPTTCVYYTKWL 76
>gb|OAY75962.1| DNA-directed RNA polymerase III subunit RPC6 [Ananas comosus]
Length = 208
Score = 77.0 bits (188), Expect = 3e-14
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
P GALS+IPCGVCPRISECTPDG+ISP C+Y+ KWL +DF
Sbjct: 167 PIAGALSAIPCGVCPRISECTPDGVISPNTCIYFTKWLELDF 208
>ref|XP_011080605.1| DNA-directed RNA polymerase III subunit rpc6-like [Sesamum indicum]
Length = 239
Score = 77.4 bits (189), Expect = 4e-14
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
+GPR GA +SIPCG CPRIS CTP+G+ISP CVYY KWL IDF
Sbjct: 196 KGPRMGAFASIPCGACPRISLCTPNGVISPGTCVYYTKWLSIDF 239
>ref|XP_020082464.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082466.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082467.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082468.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082469.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082470.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
Length = 236
Score = 77.0 bits (188), Expect = 5e-14
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
P GALS+IPCGVCPRISECTPDG+ISP C+Y+ KWL +DF
Sbjct: 195 PIAGALSAIPCGVCPRISECTPDGVISPNTCIYFTKWLELDF 236
>ref|XP_020082463.1| DNA-directed RNA polymerase III subunit RPC6 isoform X1 [Ananas
comosus]
Length = 247
Score = 77.0 bits (188), Expect = 6e-14
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
P GALS+IPCGVCPRISECTPDG+ISP C+Y+ KWL +DF
Sbjct: 206 PIAGALSAIPCGVCPRISECTPDGVISPNTCIYFTKWLELDF 247
>gb|OTF85171.1| putative winged helix-turn-helix DNA-binding domain, RNA polymerase
Rpc34-like protein [Helianthus annuus]
Length = 198
Score = 75.9 bits (185), Expect = 8e-14
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
+GP+ GAL SIPCG+CPRI ECTPDG+ISP CVYY KWL
Sbjct: 157 KGPKTGALVSIPCGICPRIRECTPDGLISPTTCVYYTKWL 196
>ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844232.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844233.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844234.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844235.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844236.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844237.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844238.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
Length = 239
Score = 76.3 bits (186), Expect = 1e-13
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWLGIDF 381
+G + GA +SIPCG CPRIS CTPDGIISP CVYY KWL IDF
Sbjct: 196 KGSKVGAFASIPCGACPRISLCTPDGIISPSTCVYYTKWLNIDF 239
>ref|XP_022021339.1| DNA-directed RNA polymerase III subunit RPC6 [Helianthus annuus]
Length = 232
Score = 75.9 bits (185), Expect = 1e-13
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -1
Query: 512 EGPREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
+GP+ GAL SIPCG+CPRI ECTPDG+ISP CVYY KWL
Sbjct: 191 KGPKTGALVSIPCGICPRIRECTPDGLISPTTCVYYTKWL 230
>ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 75.9 bits (185), Expect = 2e-13
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
P+ GA++SIPCGVCPRI+ CTPDGIISP CVYYNKWL
Sbjct: 199 PKAGAMASIPCGVCPRINHCTPDGIISPTTCVYYNKWL 236
>gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 75.5 bits (184), Expect = 2e-13
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
PR GA++SIPCGVCPRI++CTPDGIISP CVYY KWL
Sbjct: 197 PRTGAMASIPCGVCPRINDCTPDGIISPTTCVYYKKWL 234
>gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 75.5 bits (184), Expect = 2e-13
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
PR GA++SIPCGVCPRI++CTPDGIISP CVYY KWL
Sbjct: 197 PRTGAMASIPCGVCPRINDCTPDGIISPTTCVYYKKWL 234
>ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
ref|XP_015570361.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
ref|XP_015570404.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
gb|EEF50894.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis]
Length = 236
Score = 75.5 bits (184), Expect = 2e-13
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -1
Query: 506 PREGALSSIPCGVCPRISECTPDGIISPINCVYYNKWL 393
PR GA++SIPCGVCPRIS+CTPDGIISP CVYY+KWL
Sbjct: 197 PRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234