BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00022352
         (429 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255649.1| pentatricopeptide repeat-containing protein ...    62   2e-08
ref|XP_010905942.1| PREDICTED: pentatricopeptide repeat-containi...    57   9e-07
ref|XP_021284721.1| pentatricopeptide repeat-containing protein ...    57   9e-07
ref|XP_007018892.2| PREDICTED: pentatricopeptide repeat-containi...    57   9e-07
gb|EOY16117.1| Pentatricopeptide repeat (PPR) superfamily protei...    57   9e-07
ref|XP_008801054.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_020547795.1| LOW QUALITY PROTEIN: pentatricopeptide repea...    57   1e-06
gb|OAY72053.1| Pentatricopeptide repeat-containing protein [Anan...    57   1e-06
ref|XP_020110207.1| pentatricopeptide repeat-containing protein ...    57   2e-06
gb|OMO94142.1| hypothetical protein COLO4_16506 [Corchorus olito...    57   2e-06
ref|XP_020695192.1| pentatricopeptide repeat-containing protein ...    56   2e-06
ref|XP_022744599.1| pentatricopeptide repeat-containing protein ...    56   3e-06
ref|XP_011083953.1| pentatricopeptide repeat-containing protein ...    55   4e-06
ref|XP_024168702.1| pentatricopeptide repeat-containing protein ...    55   4e-06
ref|XP_011083951.1| pentatricopeptide repeat-containing protein ...    55   4e-06
dbj|GAY41681.1| hypothetical protein CUMW_061280 [Citrus unshiu]       55   5e-06
gb|KZV28928.1| pentatricopeptide repeat-containing protein-like ...    55   6e-06
gb|PKA51590.1| Pentatricopeptide repeat-containing protein [Apos...    55   6e-06
gb|KDO80855.1| hypothetical protein CISIN_1g007052mg [Citrus sin...    55   6e-06
ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_020255649.1| pentatricopeptide repeat-containing protein At4g18520-like
           [Asparagus officinalis]
 gb|ONK73983.1| uncharacterized protein A4U43_C03F1590 [Asparagus officinalis]
          Length = 605

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EALQLMYRMQ +GFYVDDFVL TVL  C D QWE
Sbjct: 558 CREALQLMYRMQKEGFYVDDFVLSTVLGSCGDLQWE 593


>ref|XP_010905942.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520
           [Elaeis guineensis]
          Length = 616

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQ +G YVDDFV  TVLS C D QWE
Sbjct: 569 CREALRLMYRMQEEGLYVDDFVHATVLSACGDIQWE 604


>ref|XP_021284721.1| pentatricopeptide repeat-containing protein At4g18520,
           chloroplastic [Herrania umbratica]
          Length = 620

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EALQLMYRM+A+GF VDD++L TVLS C D +W+
Sbjct: 574 CREALQLMYRMEAEGFEVDDYILTTVLSACGDIEWD 609


>ref|XP_007018892.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18520
           [Theobroma cacao]
          Length = 620

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EALQLMYRM+A+GF VDD++L TVLS C D +W+
Sbjct: 574 CREALQLMYRMEAEGFEVDDYILTTVLSACGDIEWD 609


>gb|EOY16117.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 620

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EALQLMYRM+A+GF VDD++L TVLS C D +W+
Sbjct: 574 CREALQLMYRMEAEGFEVDDYILTTVLSACGDIEWD 609


>ref|XP_008801054.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520
           [Phoenix dactylifera]
          Length = 616

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQ +G YVDDFV  TVLS C D QWE
Sbjct: 569 CREALKLMYRMQEEGLYVDDFVHATVLSVCGDIQWE 604


>ref|XP_020547795.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
           At4g18520-like [Sesamum indicum]
          Length = 619

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQA+G  VDD+VL TVL+ C DF+WE
Sbjct: 574 CSEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFKWE 609


>gb|OAY72053.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 296

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQ +GF VD+FVL TVLS C D QWE
Sbjct: 242 CKEALKLMYRMQEEGFDVDNFVLATVLSACGDVQWE 277


>ref|XP_020110207.1| pentatricopeptide repeat-containing protein At4g18520-like [Ananas
           comosus]
          Length = 577

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQ +GF VD+FVL TVLS C D QWE
Sbjct: 523 CKEALKLMYRMQEEGFDVDNFVLATVLSACGDVQWE 558


>gb|OMO94142.1| hypothetical protein COLO4_16506 [Corchorus olitorius]
          Length = 621

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EALQLMYRM+A+GF VDD++L TVL+ C D +W+
Sbjct: 575 CQEALQLMYRMEAEGFEVDDYILATVLTACGDIEWD 610


>ref|XP_020695192.1| pentatricopeptide repeat-containing protein At4g18520-like
           [Dendrobium catenatum]
 gb|PKU71466.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 615

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDF 188
           C EA++LMYRMQA+GF+VDDF+L TVLS C DF
Sbjct: 568 CEEAMKLMYRMQAEGFHVDDFILTTVLSSCGDF 600


>ref|XP_022744599.1| pentatricopeptide repeat-containing protein At4g18520,
           chloroplastic-like [Durio zibethinus]
          Length = 620

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRM+A+GF VDD++L TVLS C D +W+
Sbjct: 574 CREALKLMYRMEAEGFEVDDYILTTVLSACGDIEWD 609


>ref|XP_011083953.1| pentatricopeptide repeat-containing protein At4g18520-like isoform
           X2 [Sesamum indicum]
          Length = 470

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQA+G  VDD++L TVL+ C DF+W+
Sbjct: 425 CSEALKLMYRMQAEGIEVDDYILSTVLTTCGDFEWK 460


>ref|XP_024168702.1| pentatricopeptide repeat-containing protein At4g18520,
           chloroplastic-like [Rosa chinensis]
 gb|PRQ21541.1| putative tetratricopeptide-like helical domain-containing protein
           [Rosa chinensis]
          Length = 616

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/36 (61%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQA+GF +DD++L TVL+ C D +W+
Sbjct: 569 CQEALKLMYRMQAEGFQLDDYILATVLTACGDIEWD 604


>ref|XP_011083951.1| pentatricopeptide repeat-containing protein At4g18520-like isoform
           X1 [Sesamum indicum]
 ref|XP_011083952.1| pentatricopeptide repeat-containing protein At4g18520-like isoform
           X1 [Sesamum indicum]
          Length = 618

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+LMYRMQA+G  VDD++L TVL+ C DF+W+
Sbjct: 573 CSEALKLMYRMQAEGIEVDDYILSTVLTTCGDFEWK 608


>dbj|GAY41681.1| hypothetical protein CUMW_061280 [Citrus unshiu]
          Length = 472

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = -3

Query: 364 NDEEFDLGTIQARIEGFRHRKWSECCCPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQ 185
           N  E +L T ++ I G+         C EAL+LMYRMQA+GF VDD++L+TV + C D +
Sbjct: 403 NMPERNLFTWKSMIVGYARNG----LCQEALKLMYRMQAEGFEVDDYILITVYNACGDIE 458

Query: 184 W 182
           W
Sbjct: 459 W 459


>gb|KZV28928.1| pentatricopeptide repeat-containing protein-like [Dorcoceras
           hygrometricum]
          Length = 575

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQWE 179
           C EAL+L+Y MQA+G  VDDF+L TVLS C DF+W+
Sbjct: 529 CDEALRLVYHMQAEGIEVDDFILSTVLSSCGDFEWD 564


>gb|PKA51590.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 609

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 286 CPEALQLMYRMQAKGFYVDDFVLLTVLSECRDF 188
           C +AL+LMYRMQA+GF+VDDF+L TVLS C DF
Sbjct: 562 CHKALKLMYRMQAEGFHVDDFILTTVLSSCGDF 594


>gb|KDO80855.1| hypothetical protein CISIN_1g007052mg [Citrus sinensis]
          Length = 620

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = -3

Query: 364 NDEEFDLGTIQARIEGFRHRKWSECCCPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQ 185
           N  E +L T ++ I G+         C EAL+LMYRMQA+GF VDD++L+TV + C D +
Sbjct: 551 NMPERNLFTWKSMIVGYARNG----LCQEALKLMYRMQAEGFEVDDYILITVYNACGDIE 606

Query: 184 W 182
           W
Sbjct: 607 W 607


>ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520
           [Citrus sinensis]
          Length = 620

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = -3

Query: 364 NDEEFDLGTIQARIEGFRHRKWSECCCPEALQLMYRMQAKGFYVDDFVLLTVLSECRDFQ 185
           N  E +L T ++ I G+         C EAL+LMYRMQA+GF VDD++L+TV + C D +
Sbjct: 551 NMPERNLFTWKSMIVGYARNG----LCQEALKLMYRMQAEGFEVDDYILITVYNACGDIE 606

Query: 184 W 182
           W
Sbjct: 607 W 607