BLASTX nr result

ID: Ophiopogon25_contig00022266 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00022266
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK57393.1| uncharacterized protein A4U43_C09F60 [Asparagus o...    98   1e-21

>gb|ONK57393.1| uncharacterized protein A4U43_C09F60 [Asparagus officinalis]
          Length = 329

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   HLGSGNYASRDLKAQVYGNVVDSTRDLSIGVGNASGRDNNLIVRDNEF-RGRHGSVDIGV 177
           HL S N A RD +A+VYGNVVD T DLSI  GN SGRD +L VRDN+F RG  GSV+IGV
Sbjct: 118 HLASENSACRDFRARVYGNVVDPTHDLSISAGNVSGRDADLTVRDNDFLRGGQGSVNIGV 177

Query: 178 GNQSGGPLKIVVA 216
           GNQSGG +KIVVA
Sbjct: 178 GNQSGGAIKIVVA 190


Top