BLASTX nr result
ID: Ophiopogon25_contig00021880
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00021880
(2357 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017702375.1| PREDICTED: DNA topoisomerase 2-like isoform ... 52 7e-07
ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2 isoform X1 [B... 41 5e-06
ref|XP_010235848.1| PREDICTED: DNA topoisomerase 2 isoform X2 [B... 41 5e-06
ref|XP_015627338.1| PREDICTED: DNA topoisomerase 2 [Oryza sativa... 45 8e-06
ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2 [Oryza brachy... 45 8e-06
dbj|BAF09747.1| Os02g0699700, partial [Oryza sativa Japonica Gro... 45 8e-06
>ref|XP_017702375.1| PREDICTED: DNA topoisomerase 2-like isoform X1 [Phoenix dactylifera]
Length = 176
Score = 52.0 bits (123), Expect(2) = 7e-07
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -3
Query: 1317 VSLFMQLVALLI*DHDSSHIKGLLINLFHFFWSSLIK 1207
V ++Q++ LL+ DHD SHIKGLLIN H FW SL+K
Sbjct: 54 VPAYLQVLCLLVQDHDGSHIKGLLINFIHSFWPSLLK 90
Score = 32.7 bits (73), Expect(2) = 7e-07
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQV 1373
N +I+NI K LQ GK S K LRYG MIMT +V
Sbjct: 3 NAEIQNI------KQILGLQQGKEYESTKGLRYGHLMIMTDRV 39
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -3
Query: 765 VSLFMQLVALLIHDHDSFQIKGFLINLFHLF*PSLIK 655
V ++Q++ LL+ DHD IKG LIN H F PSL+K
Sbjct: 54 VPAYLQVLCLLVQDHDGSHIKGLLINFIHSFWPSLLK 90
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -2
Query: 913 IKQSLSLQHGKHYNSLKDLRYGSLMIMLIR 824
IKQ L LQ GK Y S K LRYG LMIM R
Sbjct: 9 IKQILGLQQGKEYESTKGLRYGHLMIMTDR 38
>ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2 isoform X1 [Brachypodium distachyon]
gb|KQK00887.1| hypothetical protein BRADI_3g52470v3 [Brachypodium distachyon]
Length = 1494
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQ 1376
N +I+NI K LQHGK NS KDLRYG MIMT Q
Sbjct: 500 NAEIQNI------KKIIGLQHGKEYNSTKDLRYGHLMIMTDQ 535
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -3
Query: 1278 DHDSSHIKGLLINLFHFFWSSLIK 1207
DHD SHIKGLLIN H W SL+K
Sbjct: 536 DHDGSHIKGLLINFIHSSWPSLLK 559
>ref|XP_010235848.1| PREDICTED: DNA topoisomerase 2 isoform X2 [Brachypodium distachyon]
gb|KQK00888.1| hypothetical protein BRADI_3g52470v3 [Brachypodium distachyon]
Length = 1490
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQ 1376
N +I+NI K LQHGK NS KDLRYG MIMT Q
Sbjct: 500 NAEIQNI------KKIIGLQHGKEYNSTKDLRYGHLMIMTDQ 535
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -3
Query: 1278 DHDSSHIKGLLINLFHFFWSSLIK 1207
DHD SHIKGLLIN H W SL+K
Sbjct: 536 DHDGSHIKGLLINFIHSSWPSLLK 559
>ref|XP_015627338.1| PREDICTED: DNA topoisomerase 2 [Oryza sativa Japonica Group]
dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
Length = 1525
Score = 45.4 bits (106), Expect(2) = 8e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -3
Query: 2139 IKQSLSLQHGKHYNSLKNLRYGSLMIMTYQ 2050
IKQ L LQHGK Y+S K LRYG LMIMT Q
Sbjct: 509 IKQILGLQHGKQYDSTKGLRYGHLMIMTDQ 538
Score = 44.7 bits (104), Expect(2) = 8e-06
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -3
Query: 1278 DHDSSHIKGLLINLFHFFWSSLIK 1207
DHD SHIKGLLIN H FW SLIK
Sbjct: 539 DHDGSHIKGLLINFIHSFWPSLIK 562
Score = 36.2 bits (82), Expect(2) = 8e-06
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQ 1376
N +I+NI K LQHGK +S K LRYG MIMT Q
Sbjct: 503 NAEIQNI------KQILGLQHGKQYDSTKGLRYGHLMIMTDQ 538
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1
Query: 1973 LVALLIQDHDSFHIKGFLINLFYLF*SSLIK 1881
L+ + QDHD HIKG LIN + F SLIK
Sbjct: 532 LMIMTDQDHDGSHIKGLLINFIHSFWPSLIK 562
>ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2 [Oryza brachyantha]
Length = 1506
Score = 45.4 bits (106), Expect(2) = 8e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -3
Query: 2139 IKQSLSLQHGKHYNSLKNLRYGSLMIMTYQ 2050
IKQ L LQHGK Y+S K LRYG LMIMT Q
Sbjct: 512 IKQILGLQHGKQYDSTKGLRYGHLMIMTDQ 541
Score = 44.7 bits (104), Expect(2) = 8e-06
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -3
Query: 1278 DHDSSHIKGLLINLFHFFWSSLIK 1207
DHD SHIKGLLIN H FW SLIK
Sbjct: 542 DHDGSHIKGLLINFIHSFWPSLIK 565
Score = 36.2 bits (82), Expect(2) = 8e-06
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQ 1376
N +I+NI K LQHGK +S K LRYG MIMT Q
Sbjct: 506 NAEIQNI------KQILGLQHGKQYDSTKGLRYGHLMIMTDQ 541
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1
Query: 1973 LVALLIQDHDSFHIKGFLINLFYLF*SSLIK 1881
L+ + QDHD HIKG LIN + F SLIK
Sbjct: 535 LMIMTDQDHDGSHIKGLLINFIHSFWPSLIK 565
>dbj|BAF09747.1| Os02g0699700, partial [Oryza sativa Japonica Group]
dbj|BAS80451.1| Os02g0699700, partial [Oryza sativa Japonica Group]
Length = 956
Score = 45.4 bits (106), Expect(2) = 8e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -3
Query: 2139 IKQSLSLQHGKHYNSLKNLRYGSLMIMTYQ 2050
IKQ L LQHGK Y+S K LRYG LMIMT Q
Sbjct: 509 IKQILGLQHGKQYDSTKGLRYGHLMIMTDQ 538
Score = 44.7 bits (104), Expect(2) = 8e-06
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -3
Query: 1278 DHDSSHIKGLLINLFHFFWSSLIK 1207
DHD SHIKGLLIN H FW SLIK
Sbjct: 539 DHDGSHIKGLLINFIHSFWPSLIK 562
Score = 36.2 bits (82), Expect(2) = 8e-06
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2
Query: 1501 NVDIKNIIHEHVHKAKSSLQHGKHINSLKDLRYGSFMIMTYQ 1376
N +I+NI K LQHGK +S K LRYG MIMT Q
Sbjct: 503 NAEIQNI------KQILGLQHGKQYDSTKGLRYGHLMIMTDQ 538
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1
Query: 1973 LVALLIQDHDSFHIKGFLINLFYLF*SSLIK 1881
L+ + QDHD HIKG LIN + F SLIK
Sbjct: 532 LMIMTDQDHDGSHIKGLLINFIHSFWPSLIK 562