BLASTX nr result
ID: Ophiopogon25_contig00020980
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00020980
(659 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247457.1| multiple RNA-binding domain-containing prote... 202 2e-72
gb|ONK55952.1| uncharacterized protein A4U43_C10F2630 [Asparagus... 140 5e-54
ref|XP_008812571.1| PREDICTED: multiple RNA-binding domain-conta... 127 8e-49
ref|XP_010914288.1| PREDICTED: multiple RNA-binding domain-conta... 123 2e-47
gb|PKU77317.1| Polyadenylate-binding protein 2 [Dendrobium caten... 114 8e-43
ref|XP_010649344.1| PREDICTED: multiple RNA-binding domain-conta... 107 8e-43
ref|XP_020673203.1| multiple RNA-binding domain-containing prote... 114 8e-43
emb|CDP18166.1| unnamed protein product [Coffea canephora] 110 2e-42
ref|XP_020103411.1| multiple RNA-binding domain-containing prote... 112 7e-42
gb|OAY74075.1| Multiple RNA-binding domain-containing protein 1,... 112 9e-42
ref|XP_006827686.3| LOW QUALITY PROTEIN: multiple RNA-binding do... 107 1e-41
ref|XP_009380919.1| PREDICTED: multiple RNA-binding domain-conta... 106 1e-41
ref|XP_020583761.1| multiple RNA-binding domain-containing prote... 111 1e-41
ref|XP_020583762.1| multiple RNA-binding domain-containing prote... 111 1e-41
ref|XP_020090297.1| LOW QUALITY PROTEIN: probable RNA-binding pr... 110 2e-41
gb|OVA01962.1| RNA recognition motif domain [Macleaya cordata] 100 3e-41
ref|XP_017979337.1| PREDICTED: multiple RNA-binding domain-conta... 99 2e-40
gb|PKA62790.1| Polyadenylate-binding protein 2 [Apostasia shenzh... 103 3e-40
gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA bindi... 98 6e-40
ref|XP_018810553.1| PREDICTED: multiple RNA-binding domain-conta... 102 2e-39
>ref|XP_020247457.1| multiple RNA-binding domain-containing protein 1 [Asparagus
officinalis]
Length = 899
Score = 202 bits (514), Expect(2) = 2e-72
Identities = 108/160 (67%), Positives = 126/160 (78%), Gaps = 3/160 (1%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYSAK+ N N ++KNLV + +LQKG +KNEAK S++SE+NDPQLQEFLQVMQPR
Sbjct: 153 SRYSAKEENSSNQSKKNLVGDKSQNLQKGLPLSKNEAKNSQNSENNDPQLQEFLQVMQPR 212
Query: 297 AKSKLWADETINT--VDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETN 124
AKSK+WAD+T+ T +DK K N EE LS SKKKQS ENEF + SSSPALKGCSETN
Sbjct: 213 AKSKIWADDTLRTAQLDKGGKAN-EEGRLSKSKKKQSINENEFPQETSSSPALKGCSETN 271
Query: 123 PIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHG 4
IK+++E V D DISDMDYFKSR+KK WSDSETDDEG G
Sbjct: 272 LIKQADETVRDDDISDMDYFKSRVKKEWSDSETDDEGLAG 311
Score = 99.4 bits (246), Expect(2) = 2e-72
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAF+GFRTEQEAEEALKF+NNSYMDT RL CEVARKV DPNI
Sbjct: 97 MRTKDGKSRQFAFVGFRTEQEAEEALKFYNNSYMDTCRLTCEVARKVGDPNI 148
>gb|ONK55952.1| uncharacterized protein A4U43_C10F2630 [Asparagus officinalis]
Length = 892
Score = 140 bits (353), Expect(2) = 5e-54
Identities = 84/160 (52%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYSAK+ N N ++KNLV + +LQKG +KNEAK S++SE+NDPQLQEFLQVMQPR
Sbjct: 153 SRYSAKEENSSNQSKKNLVGDKSQNLQKGLPLSKNEAKNSQNSENNDPQLQEFLQVMQPR 212
Query: 297 AKSKLWADETINT--VDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETN 124
AKSK+WAD+T+ T +DK K N EE LS
Sbjct: 213 AKSKIWADDTLRTAQLDKGGKAN-EEGRLS------------------------------ 241
Query: 123 PIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHG 4
NE V D DISDMDYFKSR+KK WSDSETDDEG G
Sbjct: 242 ----KNETVRDDDISDMDYFKSRVKKEWSDSETDDEGLAG 277
Score = 99.4 bits (246), Expect(2) = 5e-54
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAF+GFRTEQEAEEALKF+NNSYMDT RL CEVARKV DPNI
Sbjct: 97 MRTKDGKSRQFAFVGFRTEQEAEEALKFYNNSYMDTCRLTCEVARKVGDPNI 148
>ref|XP_008812571.1| PREDICTED: multiple RNA-binding domain-containing protein 1
[Phoenix dactylifera]
Length = 615
Score = 127 bits (320), Expect(2) = 8e-49
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 16/174 (9%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQ--KGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQP 301
SRYSAKK + + + VE ++ KG + + +K SK E+NDP+LQEFLQ+MQP
Sbjct: 90 SRYSAKKGSEGNKDSIAVEAKSSVIKNSKGLGSSTDVSKNSKEGENNDPKLQEFLQIMQP 149
Query: 300 RAKSKLWADET---INTVDKDDKVNMEEAHLSASKKKQ-----------SNKENEFANKA 163
R KSKLWA++T I ++KD++ +EA SK+ + SN EN A+
Sbjct: 150 RVKSKLWANDTLGGIQLIEKDERGAEKEAQPPKSKRNESAKLKVQVIDGSNGENGVAHGT 209
Query: 162 SSSPALKGCSETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHGE 1
SS KG SET+ ++SNE ++DMDYFKSRIKKNWSDSETD+E S E
Sbjct: 210 SSVHIQKGASETS-TEQSNEIAQYDVMTDMDYFKSRIKKNWSDSETDNEDSRSE 262
Score = 94.7 bits (234), Expect(2) = 8e-49
Identities = 42/52 (80%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTE+EAEEALK+FNN+YMDT +++CE+A KV DPNI
Sbjct: 34 MRTKDGKSRQFAFIGFRTEKEAEEALKYFNNTYMDTRKIMCEIAHKVGDPNI 85
>ref|XP_010914288.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X1 [Elaeis guineensis]
Length = 878
Score = 123 bits (309), Expect(2) = 2e-47
Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 17/175 (9%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSL---QKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQ 304
SRYSA+K DN+ ++ E S+ KG + + AK SK E+NDP+LQEFLQ+MQ
Sbjct: 90 SRYSARKGG-EDNKDSIGVEAKSSVIKDSKGLGSSTDVAKNSKEEENNDPKLQEFLQIMQ 148
Query: 303 PRAKSKLWADETIN---TVDKDDKVNMEEAHLSASKKKQ-----------SNKENEFANK 166
PR KSKLWA++T++ ++KD++ +EA SK+ + SN EN A+
Sbjct: 149 PRVKSKLWANDTLDGTQLIEKDERAVEKEAQPPKSKRNESAKMKVQVIDGSNGENGVAHG 208
Query: 165 ASSSPALKGCSETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHGE 1
SS KG SE + ++SNE ++DM+YFKSRIKKNWSDSETD+E S +
Sbjct: 209 TSSVHIQKGASEMS-TEQSNEIAQSDVMTDMEYFKSRIKKNWSDSETDNEDSRSD 262
Score = 94.7 bits (234), Expect(2) = 2e-47
Identities = 42/52 (80%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTE+EAEEALK+FNN+YMDT +++CE+A KV DPNI
Sbjct: 34 MRTKDGKSRQFAFIGFRTEKEAEEALKYFNNTYMDTRKIMCEIAHKVGDPNI 85
>gb|PKU77317.1| Polyadenylate-binding protein 2 [Dendrobium catenatum]
Length = 882
Score = 114 bits (284), Expect(2) = 8e-43
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS K NL +N K + + + KG + + K SSE++D +L+EF+Q+MQPR
Sbjct: 111 SRYSVMKNNLLKENSKESSKNSSLTTSKGQRSSSACVKNLGSSENSDSKLREFMQIMQPR 170
Query: 297 AKSKLWADETINTVDKDDKVNMEEAHLSASKKKQS------NKENEFANKASSSPALKGC 136
+K+KLW ++TI+++D ++ + E+ KK S E++ A+K+S +KG
Sbjct: 171 SKAKLWTNDTIHSMDFSEQKSPEKETQQGKIKKSSLLQAQLFDESDLADKSSPRSLIKG- 229
Query: 135 SETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSET----DDEGSHG 4
S+ +P KS + D ISDMDY KSRIKKNWSDSE D++G HG
Sbjct: 230 SKKSPTDKSPQVAKDDVISDMDYLKSRIKKNWSDSEADGSFDEDGDHG 277
Score = 88.6 bits (218), Expect(2) = 8e-43
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRT DGKSRQF F+GFRTE+EA+EALKFF+N+YMDT+R+ CE+AR+V DPN
Sbjct: 55 MRTTDGKSRQFGFVGFRTEREADEALKFFDNTYMDTSRITCEIARRVGDPN 105
>ref|XP_010649344.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Vitis
vinifera]
Length = 866
Score = 107 bits (267), Expect(2) = 8e-43
Identities = 62/158 (39%), Positives = 85/158 (53%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPRA 295
SRYS KK D + +++ + H +K E K K SE++DPQLQEFLQVMQPR
Sbjct: 90 SRYSLKK---EDKSTEVEKKDRGTKNSSHVGSKGE-KSKKGSENDDPQLQEFLQVMQPRV 145
Query: 294 KSKLWADETINTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETNPIK 115
KSK+WA++T+ D + + ++ + A+ S S++
Sbjct: 146 KSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQADLDESDEREDELSDSQMDT 205
Query: 114 KSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHGE 1
K N HD ISDMDYFKSR+KK WSDSE+DD G+
Sbjct: 206 KPNNLAHDEVISDMDYFKSRVKKKWSDSESDDVSESGD 243
Score = 95.1 bits (235), Expect(2) = 8e-43
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTK+GKSRQFAFIGFRTEQEAEEALKFFNNSY+DT R+ CE+ARKV DP+I
Sbjct: 34 MRTKEGKSRQFAFIGFRTEQEAEEALKFFNNSYLDTCRITCEIARKVGDPDI 85
>ref|XP_020673203.1| multiple RNA-binding domain-containing protein 1 [Dendrobium
catenatum]
ref|XP_020673204.1| multiple RNA-binding domain-containing protein 1 [Dendrobium
catenatum]
Length = 863
Score = 114 bits (284), Expect(2) = 8e-43
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS K NL +N K + + + KG + + K SSE++D +L+EF+Q+MQPR
Sbjct: 90 SRYSVMKNNLLKENSKESSKNSSLTTSKGQRSSSACVKNLGSSENSDSKLREFMQIMQPR 149
Query: 297 AKSKLWADETINTVDKDDKVNMEEAHLSASKKKQS------NKENEFANKASSSPALKGC 136
+K+KLW ++TI+++D ++ + E+ KK S E++ A+K+S +KG
Sbjct: 150 SKAKLWTNDTIHSMDFSEQKSPEKETQQGKIKKSSLLQAQLFDESDLADKSSPRSLIKG- 208
Query: 135 SETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSET----DDEGSHG 4
S+ +P KS + D ISDMDY KSRIKKNWSDSE D++G HG
Sbjct: 209 SKKSPTDKSPQVAKDDVISDMDYLKSRIKKNWSDSEADGSFDEDGDHG 256
Score = 88.6 bits (218), Expect(2) = 8e-43
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRT DGKSRQF F+GFRTE+EA+EALKFF+N+YMDT+R+ CE+AR+V DPN
Sbjct: 34 MRTTDGKSRQFGFVGFRTEREADEALKFFDNTYMDTSRITCEIARRVGDPN 84
>emb|CDP18166.1| unnamed protein product [Coffea canephora]
Length = 877
Score = 110 bits (276), Expect(2) = 2e-42
Identities = 64/152 (42%), Positives = 84/152 (55%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPRA 295
SR+S KK + E V + S K K + K K ++DPQLQEFL VMQPR+
Sbjct: 121 SRHSLKKQEKSSEEGKEVPGSNSSKIANSKEKKKKEKNKKDDGNDDPQLQEFLDVMQPRS 180
Query: 294 KSKLWADETINTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETNPIK 115
KSKLWA++T+ D + + + K Q +K NE ++ + S SET
Sbjct: 181 KSKLWANDTLTATSTDQRKMIGDKQSEVRKGDQKSKLNESDDEENRS------SETLDAD 234
Query: 114 KSNENVHDGDISDMDYFKSRIKKNWSDSETDD 19
KS VHD ISDMDYF+SR+KK WSDSE +D
Sbjct: 235 KSQNPVHDDVISDMDYFRSRVKKEWSDSEGED 266
Score = 90.5 bits (223), Expect(2) = 2e-42
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQF F+GFRTEQEAEEA+KFF+ S+MDT R+ CE+ARK+ DPNI
Sbjct: 65 MRTKDGKSRQFGFLGFRTEQEAEEAIKFFHRSFMDTCRITCEIARKIGDPNI 116
>ref|XP_020103411.1| multiple RNA-binding domain-containing protein 1-like [Ananas
comosus]
Length = 843
Score = 112 bits (280), Expect(2) = 7e-42
Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 10/168 (5%)
Frame = -3
Query: 474 SRYSAKKA-NLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS K++ +L+ ++ N + SL K + K A + KS+E NDP+LQEFLQVMQPR
Sbjct: 90 SRYSLKRSTHLSQSKDNAGVSDQVSLTKISEGEKLNANLCKSTEVNDPKLQEFLQVMQPR 149
Query: 297 AKSKLWADETINT---VDKDDKVNMEEAHLSASKKKQSNKENEFANKASSS--PALKG-C 136
+KSKLWA++ I VDKD K+N ++ +KQ+ + SS A K
Sbjct: 150 SKSKLWANDAIGAGDFVDKDSKINEKDCQQPQVGQKQAARPKTRTTDGSSGEPEATKSTS 209
Query: 135 SETNPIKKSNENVHDGDISDMDYFKSRIKKNWSD---SETDDEGSHGE 1
SE N +++S E ++DM+YFKSRIKKNWSD S++DDE S +
Sbjct: 210 SEENEVEESLETREHDHMTDMEYFKSRIKKNWSDAESSDSDDEDSKSQ 257
Score = 87.0 bits (214), Expect(2) = 7e-42
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFR+E+EAE AL +FNN++MDT +LICEVARKV D N+
Sbjct: 34 MRTKDGKSRQFAFIGFRSEKEAEAALNYFNNTFMDTRKLICEVARKVGDLNL 85
>gb|OAY74075.1| Multiple RNA-binding domain-containing protein 1, partial [Ananas
comosus]
Length = 842
Score = 112 bits (279), Expect(2) = 9e-42
Identities = 72/168 (42%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Frame = -3
Query: 474 SRYSAKKA-NLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS K++ +L+ ++ N + SL K + K A + KS+E NDP+LQEFLQVMQPR
Sbjct: 89 SRYSLKRSTHLSQSKDNAGVSDQVSLTKISEGEKLNANLCKSTEVNDPKLQEFLQVMQPR 148
Query: 297 AKSKLWADETINT---VDKDDKVNMEEAHLSASKKKQSNKENEFANKASSS--PALKG-C 136
KSKLWA++ I VDKD K+N ++ +KQ+ + SS A K
Sbjct: 149 TKSKLWANDAIGAGDFVDKDSKINEKDCQQPQVGQKQAARPKTRTTDGSSGEPEATKSTS 208
Query: 135 SETNPIKKSNENVHDGDISDMDYFKSRIKKNWSD---SETDDEGSHGE 1
SE N +++S E ++DM+YFKSRIKKNWSD S++DDE S +
Sbjct: 209 SEENEVEESLETREHDHMTDMEYFKSRIKKNWSDAESSDSDDEDSKSQ 256
Score = 87.0 bits (214), Expect(2) = 9e-42
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFR+E+EAE AL +FNN++MDT +LICEVARKV D N+
Sbjct: 33 MRTKDGKSRQFAFIGFRSEKEAEAALNYFNNTFMDTRKLICEVARKVGDLNL 84
>ref|XP_006827686.3| LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein
1 [Amborella trichopoda]
Length = 871
Score = 107 bits (266), Expect(2) = 1e-41
Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Frame = -3
Query: 474 SRYSAKK--ANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQP 301
S++SA K +N DN KN + S + H+ K+ AK S+ + DPQLQEFL+VMQP
Sbjct: 101 SQHSANKKGSNAGDNGKN---SSSKSSEGKHEKIKS-AKHSEENRDQDPQLQEFLEVMQP 156
Query: 300 RAKSKLWADETINTVDKDDKVNMEEAHLSASKKKQSNK-ENEFANKASSSPAL--KGCSE 130
R+KSKLWA++TI + D+ N +E H S K K++NK E+E + L +G
Sbjct: 157 RSKSKLWANDTIIS-DEHHTSNRKEIHPSKGKSKETNKMEDEVGAEIIDGEKLPNEGSLS 215
Query: 129 TNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGS 10
+ ++SN+ + +SDMDYFKSR++K+WSDSE D+ S
Sbjct: 216 RSLPRESNDVAGNPAVSDMDYFKSRVRKDWSDSEADERES 255
Score = 91.7 bits (226), Expect(2) = 1e-41
Identities = 40/52 (76%), Positives = 50/52 (96%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTE+EA+EA+K+F+NSY+DT+R+ CEVARK+ DP+I
Sbjct: 45 MRTKDGKSRQFAFIGFRTEEEAKEAIKYFHNSYLDTSRITCEVARKIGDPDI 96
>ref|XP_009380919.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Musa
acuminata subsp. malaccensis]
Length = 859
Score = 106 bits (265), Expect(2) = 1e-41
Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 17/169 (10%)
Frame = -3
Query: 474 SRYSAKKAN--LNDNEKNLVEENFH---SLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQV 310
S YS KK + N N+ + V ++ S KG + +K +K SE +DP+L+EFLQ+
Sbjct: 90 SHYSTKKVDPLTNRNKDSSVTKDQSLSGSTSKGLESFSVMSKDAKRSEKDDPKLKEFLQI 149
Query: 309 MQPRAKSKLWADETI---NTVDKDDKVNMEEAHLSASKKKQSNK---------ENEFANK 166
MQPR+K K+WA++++ N + D + EE +KKKQS + ENE A+
Sbjct: 150 MQPRSKLKMWANDSLGASNVIVPDGIADEEETKKCKTKKKQSAQIDKTEGVKGENETAHG 209
Query: 165 ASSSPALKGCSETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETDD 19
SSSP SE PI++ N + +DM+YFKSR+KKNWSDSETDD
Sbjct: 210 TSSSPTQIESSEIIPIEQFN---GEDATTDMEYFKSRVKKNWSDSETDD 255
Score = 92.0 bits (227), Expect(2) = 1e-41
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTE+EAE+AL +FNNSYMDT ++ CEVAR+V DPNI
Sbjct: 34 MRTKDGKSRQFAFIGFRTEREAEDALNYFNNSYMDTLKITCEVARRVGDPNI 85
>ref|XP_020583761.1| multiple RNA-binding domain-containing protein 1 isoform X1
[Phalaenopsis equestris]
Length = 865
Score = 111 bits (277), Expect(2) = 1e-41
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 13/171 (7%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS KK +L +N K + + KG K + K S S E +DP+ EFLQ+MQPR
Sbjct: 90 SRYSVKKNDLLKENNKESPNSSSLTCSKGQKHSNAFVKKSGSCEDDDPKFSEFLQLMQPR 149
Query: 297 AKSKLWADETINTVD---KDDKVNMEEAHLSASKKK---QSNKENEF--ANKASSSPALK 142
+K+KLWA++TI+++D +D K +E H KK Q+ +EF A+K+ ++
Sbjct: 150 SKAKLWANDTIHSMDLSEQDRKSPEKEMHQGKIKKSFPLQTRLSDEFDLADKSFPRTLIQ 209
Query: 141 GCSETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETD----DEGSHGE 1
G S + KSN +D ISDMDY KSRIKKNWSDSETD ++G G+
Sbjct: 210 G-SMKSMKNKSNGVANDDIISDMDYLKSRIKKNWSDSETDVECFEDGDRGD 259
Score = 87.0 bits (214), Expect(2) = 1e-41
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRT DGKSRQF FIGFRTE+EAEEALKFF+ +YMDT+R+ CE+AR+V DPN
Sbjct: 34 MRTIDGKSRQFGFIGFRTEREAEEALKFFDGTYMDTSRITCEIARRVGDPN 84
>ref|XP_020583762.1| multiple RNA-binding domain-containing protein 1 isoform X2
[Phalaenopsis equestris]
Length = 793
Score = 111 bits (277), Expect(2) = 1e-41
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 13/171 (7%)
Frame = -3
Query: 474 SRYSAKKANL-NDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS KK +L +N K + + KG K + K S S E +DP+ EFLQ+MQPR
Sbjct: 90 SRYSVKKNDLLKENNKESPNSSSLTCSKGQKHSNAFVKKSGSCEDDDPKFSEFLQLMQPR 149
Query: 297 AKSKLWADETINTVD---KDDKVNMEEAHLSASKKK---QSNKENEF--ANKASSSPALK 142
+K+KLWA++TI+++D +D K +E H KK Q+ +EF A+K+ ++
Sbjct: 150 SKAKLWANDTIHSMDLSEQDRKSPEKEMHQGKIKKSFPLQTRLSDEFDLADKSFPRTLIQ 209
Query: 141 GCSETNPIKKSNENVHDGDISDMDYFKSRIKKNWSDSETD----DEGSHGE 1
G S + KSN +D ISDMDY KSRIKKNWSDSETD ++G G+
Sbjct: 210 G-SMKSMKNKSNGVANDDIISDMDYLKSRIKKNWSDSETDVECFEDGDRGD 259
Score = 87.0 bits (214), Expect(2) = 1e-41
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRT DGKSRQF FIGFRTE+EAEEALKFF+ +YMDT+R+ CE+AR+V DPN
Sbjct: 34 MRTIDGKSRQFGFIGFRTEREAEEALKFFDGTYMDTSRITCEIARRVGDPN 84
>ref|XP_020090297.1| LOW QUALITY PROTEIN: probable RNA-binding protein 19 [Ananas
comosus]
Length = 829
Score = 110 bits (275), Expect(2) = 2e-41
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 7/165 (4%)
Frame = -3
Query: 474 SRYSAKKAN-LNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS +K+ L+ ++ N + S K + K A + KS+E NDP+LQEFLQVMQPR
Sbjct: 90 SRYSLEKSTPLSQSKDNAGVSDQVSSIKISEGQKLNANLCKSTEVNDPKLQEFLQVMQPR 149
Query: 297 AKSKLWADETINT---VDKDDKVNMEEAHLSASKKKQSNKENEFANKASSS--PALKGCS 133
KSKLWA++ I VDKD K+ ++ S +KQ+ + SS A K S
Sbjct: 150 TKSKLWANDAIGAGDFVDKDSKIGEKDCQQSQMGQKQAARPKARTTDGSSGEPEATKSTS 209
Query: 132 ETNPIKKSNENVHDGDISDMDYFKSRIKKNWS-DSETDDEGSHGE 1
E N +++S E ++DM+YFKSRIKKNWS S++DDE S +
Sbjct: 210 EENEMEESLETREHDHMTDMEYFKSRIKKNWSRSSDSDDEDSKSQ 254
Score = 87.4 bits (215), Expect(2) = 2e-41
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFR+E+EAE AL++FNN++MDT +LICEVARKV D N+
Sbjct: 34 MRTKDGKSRQFAFIGFRSEKEAEAALEYFNNTFMDTRKLICEVARKVGDLNL 85
>gb|OVA01962.1| RNA recognition motif domain [Macleaya cordata]
Length = 858
Score = 99.8 bits (247), Expect(2) = 3e-41
Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 9/167 (5%)
Frame = -3
Query: 474 SRYSA-KKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SR+S K+ LN++EK + SL K K KS+E +DP L+EFL+VMQPR
Sbjct: 100 SRHSVTKQETLNEDEKKTGDARSSSLVGSKGELK---KPKKSNEISDPHLREFLEVMQPR 156
Query: 297 AKSKLWADETI--NTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETN 124
KSKLWA++T+ VD++ K EE H +KQS N+ K S T+
Sbjct: 157 MKSKLWANDTLGHTPVDQNGKGGGEETHSDKGDRKQSVPMKVKLNEHDERE--KEPSGTH 214
Query: 123 PIKKSNENVHDGDISDMDYFKSRIKKNWSDS------ETDDEGSHGE 1
K +++ + +SD+DYFKSR+KK WSDS E+DD+GS E
Sbjct: 215 SAKPAHDLARNEVLSDLDYFKSRVKKEWSDSDSDLGEESDDDGSSSE 261
Score = 97.4 bits (241), Expect(2) = 3e-41
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTEQ+AEEALK+FNNSYMDT R+ CE+ARKV DPNI
Sbjct: 44 MRTKDGKSRQFAFIGFRTEQQAEEALKYFNNSYMDTCRITCEIARKVGDPNI 95
>ref|XP_017979337.1| PREDICTED: multiple RNA-binding domain-containing protein 1
[Theobroma cacao]
ref|XP_017979339.1| PREDICTED: multiple RNA-binding domain-containing protein 1
[Theobroma cacao]
Length = 834
Score = 99.4 bits (246), Expect(2) = 2e-40
Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = -3
Query: 474 SRYSAKKA-NLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPR 298
SRYS+KK N+ + K S+ +K KV +SSE +DPQLQEFLQVMQPR
Sbjct: 90 SRYSSKKQENVTETGKTTAGGKSLSIID----SKGGKKVLESSEKDDPQLQEFLQVMQPR 145
Query: 297 AKSKLWADETINTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETNPI 118
KSK+WA++ + + K + + + K+ + + A +S AL ET
Sbjct: 146 VKSKMWANDIVIDTPANQKSKVTKKKAISEKESRQTSASVDAETDETSIALDDDDET--- 202
Query: 117 KKSNENVHDGDISDMDYFKSRIKKNWSDSETDD 19
K S+ D ISDMDYFKSR+KK+WSDSE+++
Sbjct: 203 KASDTLARDEVISDMDYFKSRVKKDWSDSESEE 235
Score = 95.1 bits (235), Expect(2) = 2e-40
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRTKDGKSRQFAFIG+RTEQEAEEA+K+FN SY+DT+R+ICE+ARKV DPN
Sbjct: 34 MRTKDGKSRQFAFIGYRTEQEAEEAIKYFNKSYLDTSRIICEIARKVGDPN 84
>gb|PKA62790.1| Polyadenylate-binding protein 2 [Apostasia shenzhenica]
Length = 862
Score = 103 bits (257), Expect(2) = 3e-40
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 14/167 (8%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPRA 295
SRYS K N +N K +++ ++ +G AK + ++DP+L+EF Q+MQPR
Sbjct: 90 SRYSGNKNNCKENTKEYSQKSSLAISRGQSSIAL-AKKLEICGNDDPKLKEFFQIMQPRV 148
Query: 294 KSKLWADETINTVD--KDDKVNMEEAHLSASKK-----------KQSNKENEFANKASSS 154
K+K+W ++TI +D K K +E HL K+ +S+K++E + + S
Sbjct: 149 KAKIWTNDTIPAMDIEKSSKPGEKETHLDKKKRISSCEAHAQLSDESSKKSELIDASFSV 208
Query: 153 PALKGCSETNPIKKSNENV-HDGDISDMDYFKSRIKKNWSDSETDDE 16
P K S + K + NV DG ISDMDYFKSR+KKNW DSET DE
Sbjct: 209 PLSKESSIA--MTKLSANVAKDGVISDMDYFKSRVKKNWLDSETYDE 253
Score = 90.1 bits (222), Expect(2) = 3e-40
Identities = 39/51 (76%), Positives = 47/51 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRTKDGKSRQF+FIGFRTE+EAEEA+ FFNN+YMDT+++ CE+A KV DPN
Sbjct: 34 MRTKDGKSRQFSFIGFRTEREAEEAISFFNNTYMDTSKITCEIAHKVGDPN 84
>gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA binding [Theobroma
cacao]
Length = 971
Score = 97.8 bits (242), Expect(2) = 6e-40
Identities = 62/152 (40%), Positives = 85/152 (55%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPRA 295
SRYS+KK N E SL +K KV +SSE +DPQLQEFLQVMQPR
Sbjct: 227 SRYSSKKQE-NVTETGKTTAGGKSLSV--IDSKGGKKVLESSEKDDPQLQEFLQVMQPRV 283
Query: 294 KSKLWADETINTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETNPIK 115
KSK+WA++ + + K + + + K+ + + A ++ AL ET K
Sbjct: 284 KSKMWANDIVIDTPANQKSKVTKKKAISEKESRQTSASVDAETDETNIALDDDDET---K 340
Query: 114 KSNENVHDGDISDMDYFKSRIKKNWSDSETDD 19
S+ D ISDMDYFKSR+KK+WSDSE+++
Sbjct: 341 ASDTVARDEVISDMDYFKSRVKKDWSDSESEE 372
Score = 95.1 bits (235), Expect(2) = 6e-40
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPN 507
MRTKDGKSRQFAFIG+RTEQEAEEA+K+FN SY+DT+R+ICE+ARKV DPN
Sbjct: 171 MRTKDGKSRQFAFIGYRTEQEAEEAIKYFNKSYLDTSRIICEIARKVGDPN 221
>ref|XP_018810553.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X1 [Juglans regia]
ref|XP_018810554.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X2 [Juglans regia]
Length = 847
Score = 102 bits (253), Expect(2) = 2e-39
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Frame = -3
Query: 474 SRYSAKKANLNDNEKNLVEENFHSLQKGHKPAKNEAKVSKSSEHNDPQLQEFLQVMQPRA 295
SR+S KK + +E + + +S G K + K KS E++DP+LQEFLQVMQPR
Sbjct: 104 SRHSLKKEDKRTDEGTKIAGSKNSSLAGSKGERENLK--KSCENDDPKLQEFLQVMQPRV 161
Query: 294 KSKLWADETI--NTVDKDDKVNMEEAHLSASKKKQSNKENEFANKASSSPALKGCSETNP 121
KSKLWA++T+ +T D++ V E +KK+S + +++ S+
Sbjct: 162 KSKLWANDTLITSTADQNGDVGKRETQEKEERKKKSVPVHIELDESD-------ISDIYE 214
Query: 120 IKKSNENVHDGDISDMDYFKSRIKKNWSDSETDDEGSHGE 1
+KS HD ISDMDYFKSR+K+ WSDSE+ D+ + +
Sbjct: 215 AEKSPSLGHDEVISDMDYFKSRVKQKWSDSESSDDDHNND 254
Score = 89.4 bits (220), Expect(2) = 2e-39
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = -1
Query: 659 MRTKDGKSRQFAFIGFRTEQEAEEALKFFNNSYMDTNRLICEVARKVNDPNI 504
MRTKDGKSRQFAFIGFRTE+EAE+A+K+FN SY+DT R+ CE+ARKV DP+I
Sbjct: 48 MRTKDGKSRQFAFIGFRTEREAEDAIKYFNKSYIDTCRITCEIARKVGDPDI 99