BLASTX nr result
ID: Ophiopogon25_contig00020933
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00020933
(437 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247555.1| RNA polymerase II transcription factor B sub... 150 3e-41
ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription f... 150 1e-40
ref|XP_020247553.1| RNA polymerase II transcription factor B sub... 150 2e-40
ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription f... 148 6e-40
gb|OVA13234.1| Transcription factor TFIIH subunit p52/Tfb2 [Macl... 146 5e-39
gb|PHU26465.1| hypothetical protein BC332_04797 [Capsicum chinense] 138 8e-39
ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription f... 145 9e-39
ref|XP_018679081.1| PREDICTED: RNA polymerase II transcription f... 145 1e-38
ref|XP_009392827.1| PREDICTED: RNA polymerase II transcription f... 145 1e-38
ref|XP_009392826.1| PREDICTED: RNA polymerase II transcription f... 145 1e-38
ref|XP_010316742.1| PREDICTED: RNA polymerase II transcription f... 142 2e-38
ref|XP_020113268.1| RNA polymerase II transcription factor B sub... 143 3e-38
ref|XP_020686246.1| RNA polymerase II transcription factor B sub... 144 4e-38
ref|XP_019067850.1| PREDICTED: RNA polymerase II transcription f... 142 5e-38
ref|XP_018820182.1| PREDICTED: RNA polymerase II transcription f... 143 5e-38
ref|XP_020113267.1| RNA polymerase II transcription factor B sub... 143 5e-38
gb|PKA50842.1| hypothetical protein AXF42_Ash007497 [Apostasia s... 142 1e-37
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ... 142 1e-37
ref|XP_004232855.1| PREDICTED: RNA polymerase II transcription f... 142 1e-37
gb|KMZ72824.1| General transcription factor IIH subunit [Zostera... 142 1e-37
>ref|XP_020247555.1| RNA polymerase II transcription factor B subunit 2 isoform X2
[Asparagus officinalis]
Length = 364
Score = 150 bits (378), Expect = 3e-41
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIVARNFMDMVAALPA+KLDKLYES+FICEAV RS PPLAKKYVLQ LF+D +TA
Sbjct: 1 MPQVRIVARNFMDMVAALPAVKLDKLYESSFICEAVLRSLPPLAKKYVLQMLFIDSPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
K +EEWVL+DGYSKHKVAIDRLLQLR
Sbjct: 61 KFMEEWVLADGYSKHKVAIDRLLQLR 86
>ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Phoenix dactylifera]
Length = 451
Score = 150 bits (379), Expect = 1e-40
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MP+VRIVA+NFMDMVAALPAMKLDKLY STFICEAV RS PPLAKKYVLQ LFVD +TA
Sbjct: 1 MPEVRIVAKNFMDMVAALPAMKLDKLYSSTFICEAVLRSLPPLAKKYVLQMLFVDSPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L+DGYSKHKVAIDRLLQLR
Sbjct: 61 KSMEEWLLADGYSKHKVAIDRLLQLR 86
>ref|XP_020247553.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
ref|XP_020247554.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
Length = 451
Score = 150 bits (378), Expect = 2e-40
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIVARNFMDMVAALPA+KLDKLYES+FICEAV RS PPLAKKYVLQ LF+D +TA
Sbjct: 1 MPQVRIVARNFMDMVAALPAVKLDKLYESSFICEAVLRSLPPLAKKYVLQMLFIDSPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
K +EEWVL+DGYSKHKVAIDRLLQLR
Sbjct: 61 KFMEEWVLADGYSKHKVAIDRLLQLR 86
>ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
ref|XP_010940416.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
Length = 451
Score = 148 bits (374), Expect = 6e-40
Identities = 73/86 (84%), Positives = 80/86 (93%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MP+VRIVA+NFMDMVAALPAMKLDKLY STFICEAV RS PPLAKKYVLQ LFVD +TA
Sbjct: 1 MPEVRIVAKNFMDMVAALPAMKLDKLYGSTFICEAVLRSLPPLAKKYVLQMLFVDSPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L+DGYSKHKV+IDRLLQLR
Sbjct: 61 KSMEEWLLADGYSKHKVSIDRLLQLR 86
>gb|OVA13234.1| Transcription factor TFIIH subunit p52/Tfb2 [Macleaya cordata]
Length = 453
Score = 146 bits (368), Expect = 5e-39
Identities = 68/86 (79%), Positives = 82/86 (95%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+I+A+NFMDMVAALPA+KLDKLY++TFICEAV RS PPLAKKYVLQ L+VD+ +TA
Sbjct: 1 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQMLYVDVPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL+DG+SKH+VAIDRL+QLR
Sbjct: 61 KSMEEWVLADGFSKHRVAIDRLIQLR 86
>gb|PHU26465.1| hypothetical protein BC332_04797 [Capsicum chinense]
Length = 175
Score = 138 bits (348), Expect = 8e-39
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVA+LP MKLD LY+++FICEA+ RS PPLAKKYVLQ L++D I+A
Sbjct: 1 MPQVKIVARNFMDMVASLPTMKLDMLYDNSFICEAILRSLPPLAKKYVLQLLYIDKPISA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
K++EEWVL DG+SKHKVAIDRL+QLR
Sbjct: 61 KTMEEWVLPDGFSKHKVAIDRLIQLR 86
>ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X4 [Musa acuminata subsp. malaccensis]
Length = 451
Score = 145 bits (366), Expect = 9e-39
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRI+A+NFMD+VAALPAMKLDKLYESTFICEAV RS PP+AK+YVLQ L++D ITA
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWLLPDGLSKHKVAIDRLLQLR 86
>ref|XP_018679081.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 456
Score = 145 bits (366), Expect = 1e-38
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRI+A+NFMD+VAALPAMKLDKLYESTFICEAV RS PP+AK+YVLQ L++D ITA
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWLLPDGLSKHKVAIDRLLQLR 86
>ref|XP_009392827.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 472
Score = 145 bits (366), Expect = 1e-38
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRI+A+NFMD+VAALPAMKLDKLYESTFICEAV RS PP+AK+YVLQ L++D ITA
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWLLPDGLSKHKVAIDRLLQLR 86
>ref|XP_009392826.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 479
Score = 145 bits (366), Expect = 1e-38
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRI+A+NFMD+VAALPAMKLDKLYESTFICEAV RS PP+AK+YVLQ L++D ITA
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEW+L DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWLLPDGLSKHKVAIDRLLQLR 86
>ref|XP_010316742.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Solanum lycopersicum]
Length = 365
Score = 142 bits (359), Expect = 2e-38
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVA+LP MKLD LY+++FICEA+ RS PPLAKKYVLQ L++D+ ITA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG+SKHKVAIDRL+QLR
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLR 86
>ref|XP_020113268.1| RNA polymerase II transcription factor B subunit 2 isoform X2
[Ananas comosus]
Length = 429
Score = 143 bits (361), Expect = 3e-38
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIV +NFMD+VAALPA KLDKLY+S FICEAV RS PPLAKKYVLQ LF+D +TA
Sbjct: 1 MPQVRIVPKNFMDLVAALPAAKLDKLYDSVFICEAVLRSLPPLAKKYVLQMLFIDFPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL+DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWVLADGLSKHKVAIDRLLQLR 86
>ref|XP_020686246.1| RNA polymerase II transcription factor B subunit 2 [Dendrobium
catenatum]
gb|PKU79818.1| hypothetical protein MA16_Dca024391 [Dendrobium catenatum]
Length = 451
Score = 144 bits (362), Expect = 4e-38
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIVA+NFMDMVA LPAMKLDKLYESTFICEAV RS PPLAKKY LQ LF++ +TA
Sbjct: 1 MPQVRIVAKNFMDMVAVLPAMKLDKLYESTFICEAVLRSLPPLAKKYALQMLFIESPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS EEWVL DG+SKH+VAI+RLLQLR
Sbjct: 61 KSFEEWVLPDGFSKHRVAIERLLQLR 86
>ref|XP_019067850.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Solanum lycopersicum]
Length = 409
Score = 142 bits (359), Expect = 5e-38
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVA+LP MKLD LY+++FICEA+ RS PPLAKKYVLQ L++D+ ITA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG+SKHKVAIDRL+QLR
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLR 86
>ref|XP_018820182.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Juglans regia]
Length = 451
Score = 143 bits (361), Expect = 5e-38
Identities = 67/86 (77%), Positives = 80/86 (93%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+I+A+NFMDMV++LPAMKLDKLYE+ FICEA+ RS PPLAKKYVLQTL++D+ ITA
Sbjct: 1 MPQVKIIAKNFMDMVSSLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQTLYIDVPITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG SKH+VAIDRL+QLR
Sbjct: 61 KSMEEWVLPDGSSKHRVAIDRLIQLR 86
>ref|XP_020113267.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Ananas comosus]
Length = 452
Score = 143 bits (361), Expect = 5e-38
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIV +NFMD+VAALPA KLDKLY+S FICEAV RS PPLAKKYVLQ LF+D +TA
Sbjct: 1 MPQVRIVPKNFMDLVAALPAAKLDKLYDSVFICEAVLRSLPPLAKKYVLQMLFIDFPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL+DG SKHKVAIDRLLQLR
Sbjct: 61 KSMEEWVLADGLSKHKVAIDRLLQLR 86
>gb|PKA50842.1| hypothetical protein AXF42_Ash007497 [Apostasia shenzhenica]
Length = 451
Score = 142 bits (359), Expect = 1e-37
Identities = 69/86 (80%), Positives = 78/86 (90%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQVRIVARNFMDMVAALP+ KLDKLYES+FICEA+ RS PPLAKKY LQ LF++ +TA
Sbjct: 1 MPQVRIVARNFMDMVAALPSAKLDKLYESSFICEALLRSLPPLAKKYTLQMLFIESPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG+SKH+VAIDRLLQLR
Sbjct: 61 KSMEEWVLPDGFSKHRVAIDRLLQLR 86
>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4 [Solanum
tuberosum]
Length = 453
Score = 142 bits (359), Expect = 1e-37
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVA+LP MKLD LY+++FICEA+ RS PPLAKKYVLQ L++D+ ITA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG+SKHKVAIDRL+QLR
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLR 86
>ref|XP_004232855.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Solanum lycopersicum]
ref|XP_015065870.1| PREDICTED: general transcription factor IIH subunit 4 [Solanum
pennellii]
Length = 453
Score = 142 bits (359), Expect = 1e-37
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVA+LP MKLD LY+++FICEA+ RS PPLAKKYVLQ L++D+ ITA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+EEWVL DG+SKHKVAIDRL+QLR
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLR 86
>gb|KMZ72824.1| General transcription factor IIH subunit [Zostera marina]
Length = 451
Score = 142 bits (358), Expect = 1e-37
Identities = 70/86 (81%), Positives = 78/86 (90%)
Frame = -1
Query: 260 MPQVRIVARNFMDMVAALPAMKLDKLYESTFICEAVHRSFPPLAKKYVLQTLFVDLTITA 81
MPQV+IVARNFMDMVAALPAMKLDKLY+STFICEAV RS PPLAKKYVLQ L++++ +TA
Sbjct: 1 MPQVKIVARNFMDMVAALPAMKLDKLYDSTFICEAVLRSLPPLAKKYVLQMLYLEIPVTA 60
Query: 80 KSLEEWVLSDGYSKHKVAIDRLLQLR 3
KS+ EWVL DG SKHKVAI RLLQLR
Sbjct: 61 KSMGEWVLPDGMSKHKVAISRLLQLR 86