BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00019804
         (699 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          52   4e-12
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    40   2e-06

>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 52.0 bits (123), Expect(2) = 4e-12
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +3

Query: 45  HDHSSGTLSWEFDVSVEAIFKNLTVNMVSANHQEEEDED 161
           HDHSSG  S+E DVS+   FKNLTVNMVS +H +E+  D
Sbjct: 39  HDHSSGISSYESDVSIGPFFKNLTVNMVSTSHLDEDAGD 77



 Score = 47.4 bits (111), Expect(2) = 4e-12
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 173 QSANDPWIKRLNALWDMRFE*RDP 244
           +S NDPWIKRLN LWDMRFE R+P
Sbjct: 83  ESTNDPWIKRLNILWDMRFEQREP 106


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 22/46 (47%), Positives = 27/46 (58%)
 Frame = +3

Query: 15  SGDEPEESAFHDHSSGTLSWEFDVSVEAIFKNLTVNMVSANHQEEE 152
           S DE       +HSS   S E DVSV   FK+LTVNM S +H +E+
Sbjct: 533 SEDEISNYLGQNHSSRISSCESDVSVGLFFKSLTVNMTSTSHPDED 578



 Score = 40.0 bits (92), Expect(2) = 2e-06
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +2

Query: 182 NDPWIKRLNALWDMRFE*RDP 244
           +DPWIKRLN LWDM FE R+P
Sbjct: 590 DDPWIKRLNILWDMCFEQREP 610