BLASTX nr result

ID: Ophiopogon25_contig00019472 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00019472
         (870 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU86035.1| hypothetical protein MA16_Dca001866 [Dendrobium c...    56   1e-06

>gb|PKU86035.1| hypothetical protein MA16_Dca001866 [Dendrobium catenatum]
          Length = 85

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +1

Query: 568 YMEKRQVFLRSYHFSRKKTGMEKARCSAVRVRKLICV 678
           YMEKR++FLRSYH SRK++  ++ R SAVRVR+L+CV
Sbjct: 17  YMEKRRLFLRSYHLSRKRSAADRLRISAVRVRRLVCV 53


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