BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00019067
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   221   5e-80
emb|CDP17738.1| unnamed protein product [Coffea canephora]            202   2e-75
emb|CDP17739.1| unnamed protein product [Coffea canephora]            197   2e-74
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   191   1e-73
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...   170   3e-55
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  172   3e-55
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote...   162   3e-55
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   159   1e-54
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   159   3e-54
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              168   4e-54
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...   139   4e-54
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ...   171   6e-54
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-54
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-54
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-54
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-54
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-54
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          157   1e-53
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              165   1e-53
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   157   2e-53

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  221 bits (564), Expect(2) = 5e-80
 Identities = 102/136 (75%), Positives = 119/136 (87%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G HYYV+FVDD+SRR WVY M+TKDEVLGIF++WKKRME QTG++IK  R+DNGGEY
Sbjct: 280 SLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGGEY 339

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
            SDPF++ C E GIVRHFTV  TPQQNGVAERMN+TLLEK+RCMLS+ GL K FW+EA+ 
Sbjct: 340 TSDPFKKACEESGIVRHFTVKHTPQQNGVAERMNRTLLEKVRCMLSNAGLGKQFWAEAVV 399

Query: 48  YASHIINRLPSSAIGG 1
           YASH+INRLPSSAIGG
Sbjct: 400 YASHLINRLPSSAIGG 415



 Score =  105 bits (261), Expect(2) = 5e-80
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 617 RLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGILE 438
           +LWH+RLGHAGE+SL  L  QGLLK  ++C L+FCE CV  KKTRVKFGTA+H+T+GIL+
Sbjct: 207 KLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTRVKFGTAIHDTKGILD 266

Query: 437 YIHTDV 420
           Y+H+DV
Sbjct: 267 YVHSDV 272


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  202 bits (513), Expect(2) = 2e-75
 Identities = 87/136 (63%), Positives = 120/136 (88%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G++Y+V+F+DD+SRR WV+TM++KDE+L IF++WK R+E QTG++IK+LR+DNGGEY
Sbjct: 517 SLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGGEY 576

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
           +SDPF+++C+E GIVRHF V   PQQNGV+E MN+TL+EK+RCMLS+ GL + FW+EA+ 
Sbjct: 577 KSDPFQKICQECGIVRHFIVRKIPQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVT 636

Query: 48  YASHIINRLPSSAIGG 1
           YA H++NRLPSSAIGG
Sbjct: 637 YAQHLVNRLPSSAIGG 652



 Score =  109 bits (273), Expect(2) = 2e-75
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T+LWH+RLG AGEKSLQ LA QGLLKG K C LEFCE CVL K+ +VKFGT +HNT+GIL
Sbjct: 443 TKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGIL 502

Query: 440 EYIHTDV 420
           +Y+H+DV
Sbjct: 503 DYVHSDV 509


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  197 bits (500), Expect(2) = 2e-74
 Identities = 86/136 (63%), Positives = 119/136 (87%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G++Y+V+F+DD+SRR WV+TM++KDEVL IF++WK R+E QTG++IK+LR+DNGGEY
Sbjct: 125 SLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGGEY 184

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
           +SDPF+++ +E GIV+HFTV  TPQQNGV+ERMN+TL+EK+ CMLS+  L + FW+E + 
Sbjct: 185 KSDPFQKIGQECGIVQHFTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAETVT 244

Query: 48  YASHIINRLPSSAIGG 1
           YA H++NRLPSSAIGG
Sbjct: 245 YAQHLVNRLPSSAIGG 260



 Score =  111 bits (277), Expect(2) = 2e-74
 Identities = 48/67 (71%), Positives = 58/67 (86%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T+LWH+RLGHAGEKSLQ LA QGLLKG K C LEFCE CVL K+ +VKFGT +HNT+GIL
Sbjct: 51  TKLWHMRLGHAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGIL 110

Query: 440 EYIHTDV 420
           +Y+H++V
Sbjct: 111 DYVHSNV 117


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  191 bits (484), Expect(2) = 1e-73
 Identities = 85/136 (62%), Positives = 115/136 (84%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G+HY+V+FVDD+SRR WV+TM+ K++VL IF++WK  +E  TG++IKVL++DNGGEY
Sbjct: 431 SIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGEY 490

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
           +SDPF  +C++ GIVRHFTV  TPQQNGV+ERMN+TL+EK+ CMLS+  L + FW+EA+ 
Sbjct: 491 KSDPFLNVCQDCGIVRHFTVRKTPQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVT 550

Query: 48  YASHIINRLPSSAIGG 1
           YA H++NRLPSSAI G
Sbjct: 551 YAQHLVNRLPSSAIDG 566



 Score =  114 bits (285), Expect(2) = 1e-73
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = -2

Query: 617 RLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGILE 438
           +LWH+RLGHAGEKSLQ L  QGLLKG K+C LEFCE CVL K+ RVKFGTA+HNT+GIL+
Sbjct: 358 KLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILD 417

Query: 437 YIHTDV 420
           Y+H+DV
Sbjct: 418 YVHSDV 423


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score =  170 bits (430), Expect(2) = 3e-55
 Identities = 76/134 (56%), Positives = 103/134 (76%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S  G  YY+S +DDYSR+ WV T+++KDE    F +WK  +E QTGK+IK LR+DNG EY
Sbjct: 486 SRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNGLEY 545

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
            S  F+  C++EGIVRH+TV  TPQQNG+AERMN+T+LE++RCML+  GL + FW+EA+ 
Sbjct: 546 CSTEFKDFCKQEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMFWAEAVV 605

Query: 48  YASHIINRLPSSAI 7
            AS++INR PS+A+
Sbjct: 606 TASYLINRCPSTAL 619



 Score = 73.9 bits (180), Expect(2) = 3e-55
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = -2

Query: 617 RLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGILE 438
           RLWHLRLGH  EK L  L+ Q LL   K  +L FC+ECVL K +RV+F  +   ++GIL+
Sbjct: 413 RLWHLRLGHVSEKGLVELSKQNLLGRDKVDDLSFCDECVLGKCSRVRFKRSSTQSKGILD 472

Query: 437 YIHTDV 420
           Y+H+D+
Sbjct: 473 YVHSDL 478


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  172 bits (435), Expect(2) = 3e-55
 Identities = 82/137 (59%), Positives = 103/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E S+ G  Y+VSF+DDYSRR WVY ++ K  V  +F E+K ++EL+TGKRIK LR+DNGG
Sbjct: 494 EVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGG 553

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 554 EYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEA 613

Query: 54  LQYASHIINRLPSSAIG 4
            + A ++INR PS+AIG
Sbjct: 614 AKTACYVINRSPSTAIG 630



 Score = 72.0 bits (175), Expect(2) = 3e-55
 Identities = 31/67 (46%), Positives = 46/67 (68%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + L+ G KS +L FCE CV++K+ R+KF  +   ++ IL
Sbjct: 423 TMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSKHIL 482

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 483 DLIHSDV 489


>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
           [Trifolium pratense]
          Length = 285

 Score =  162 bits (410), Expect(2) = 3e-55
 Identities = 73/137 (53%), Positives = 103/137 (75%)
 Frame = -1

Query: 411 TSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGE 232
           TS  G  Y+V++VDD+SR  W+Y ++ K+EV   F  WK  +E +TG+++K LRSDNG E
Sbjct: 131 TSKGGSRYFVTYVDDHSRYAWIYFLKHKNEVFDNFKCWKAMVENRTGRKLKTLRSDNGTE 190

Query: 231 YRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEAL 52
           Y    F++ C +EGIVRH+TV GTPQQNGVAER+N+TLLEK RCM S+ GL + +W+E++
Sbjct: 191 YTDGAFKRFCDQEGIVRHWTVRGTPQQNGVAERLNRTLLEKARCMRSNSGLGREWWAESV 250

Query: 51  QYASHIINRLPSSAIGG 1
             AS+++NR P S++GG
Sbjct: 251 ATASYVVNRSPHSSLGG 267



 Score = 81.6 bits (200), Expect(2) = 3e-55
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           TR+WH+RLGH  EK L  L  +GLLK  +   +EFCE CV  K  R++F ++ H ++GIL
Sbjct: 58  TRMWHMRLGHMSEKGLSLLGEKGLLKNMEKPCMEFCEHCVYGKAHRLRFSSSKHKSRGIL 117

Query: 440 EYIHTDV 420
           +Y+HTDV
Sbjct: 118 DYVHTDV 124


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  159 bits (402), Expect(2) = 1e-54
 Identities = 77/134 (57%), Positives = 96/134 (71%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G  ++VS +DDYSR  WVY M+ K E    F EWK  ME QTGK+IK LR+DNG E+
Sbjct: 485 SLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEF 544

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
               F+Q C++EGI RH TV  TPQQNGVAERMNQTLLE+ RCMLS+ GL + FW+EA+ 
Sbjct: 545 CWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVS 604

Query: 48  YASHIINRLPSSAI 7
            A ++INR P + I
Sbjct: 605 TACYLINRGPHTGI 618



 Score = 82.4 bits (202), Expect(2) = 1e-54
 Identities = 36/66 (54%), Positives = 47/66 (71%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T+LWH+RLGH GE+ +Q L+ + LL G K  +LEFCE CV  K  R KF  A+H T+G L
Sbjct: 411 TKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTL 470

Query: 440 EYIHTD 423
           +YIH+D
Sbjct: 471 DYIHSD 476


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  159 bits (401), Expect(2) = 3e-54
 Identities = 72/134 (53%), Positives = 100/134 (74%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G  Y+++ +DDYSR+ W+Y ++ K E    F EWK  +E QT +++K LR+DNG E+
Sbjct: 465 SIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEF 524

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQ 49
            S+ F  LC++EGI RH TV  TPQQNG+AERMN+T+LE++RCMLS  GL+K FW+EA +
Sbjct: 525 LSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAE 584

Query: 48  YASHIINRLPSSAI 7
            A H+INR PSSA+
Sbjct: 585 TAVHLINRSPSSAL 598



 Score = 82.0 bits (201), Expect(2) = 3e-54
 Identities = 37/69 (53%), Positives = 45/69 (65%)
 Frame = -2

Query: 626 GYTRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQG 447
           G T+LWH RLGH   + LQ L  QG+L   K  +L FCE CV  K TRVKF  A+H TQ 
Sbjct: 389 GTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQN 448

Query: 446 ILEYIHTDV 420
            L+YIH+D+
Sbjct: 449 QLDYIHSDL 457


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  168 bits (426), Expect(2) = 4e-54
 Identities = 79/136 (58%), Positives = 104/136 (76%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E S+ G  Y+VSF+DDYSRR WVY ++ K +V  +F  +K ++EL+TGK+IK LR+DNGG
Sbjct: 494 ELSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGG 553

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGIVR FTV+ TPQQNGVAERMN+TLLE+ R ML   G+ KSFW+EA
Sbjct: 554 EYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEA 613

Query: 54  LQYASHIINRLPSSAI 7
           ++ A ++INR PS+AI
Sbjct: 614 VKTACYVINRSPSTAI 629



 Score = 71.6 bits (174), Expect(2) = 4e-54
 Identities = 31/67 (46%), Positives = 44/67 (65%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ L  + LL G K+ NL FCE CV++K+ R+KF      ++ IL
Sbjct: 423 TMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSKHIL 482

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 483 DLIHSDV 489


>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score =  139 bits (349), Expect(2) = 4e-54
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -1

Query: 408 SMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEY 229
           S+ G+H++V+FVDDYSR  WVYTM  K EVL IFVEWKKR+ELQTG++IK LRSDNGGEY
Sbjct: 445 SLGGQHWFVTFVDDYSRHCWVYTMTKKSEVLDIFVEWKKRLELQTGRKIKTLRSDNGGEY 504

Query: 228 RSDPFEQLCREEGIVRHFTVSGTPQ 154
            SDPF+QLCR+EGI RHF VS TPQ
Sbjct: 505 TSDPFQQLCRDEGIERHFIVSHTPQ 529



 Score =  101 bits (251), Expect(2) = 4e-54
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           ++LWH RLGH  E SLQ L  Q LLKGAKS  +EFCE CVL KKT+VKFGT++H T+GI+
Sbjct: 371 SKLWHYRLGHTSENSLQILCKQRLLKGAKSGKIEFCEHCVLGKKTKVKFGTSIHQTRGIM 430

Query: 440 EYIHTDV 420
           +Y+HTDV
Sbjct: 431 DYMHTDV 437


>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
          Length = 473

 Score =  171 bits (434), Expect(2) = 6e-54
 Identities = 82/137 (59%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL+TGK IK LR+DNGG
Sbjct: 106 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELETGKMIKCLRTDNGG 165

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 166 EYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTTGLAKSFWAEA 225

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 226 VKTACYLINRSPSTAIG 242



 Score = 68.2 bits (165), Expect(2) = 6e-54
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA   LL   K+ NL FCE CV +K+ R+KF      ++ IL
Sbjct: 35  TMMWHYRLGHMSERGLKILADHNLLPELKTFNLPFCEHCVTSKQHRLKFAKVTARSKHIL 94

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 95  DLIHSDV 101


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL TGKRIK LR+DNGG
Sbjct: 493 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG 552

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 553 EYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEA 612

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 613 VKTACYLINRSPSTAIG 629



 Score = 67.4 bits (163), Expect(2) = 7e-54
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K   L FCE CV +K+ R++F      ++ IL
Sbjct: 422 TMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHIL 481

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 482 DLIHSDV 488


>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL TGKRIK LR+DNGG
Sbjct: 493 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG 552

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 553 EYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEA 612

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 613 VKTACYLINRSPSTAIG 629



 Score = 67.4 bits (163), Expect(2) = 7e-54
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K   L FCE CV +K+ R++F      ++ IL
Sbjct: 422 TMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHIL 481

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 482 DLIHSDV 488


>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL TGKRIK LR+DNGG
Sbjct: 444 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG 503

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 504 EYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEA 563

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 564 VKTACYLINRSPSTAIG 580



 Score = 67.4 bits (163), Expect(2) = 7e-54
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K   L FCE CV +K+ R++F      ++ IL
Sbjct: 373 TMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHIL 432

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 433 DLIHSDV 439


>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL TGKRIK LR+DNGG
Sbjct: 444 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG 503

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 504 EYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEA 563

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 564 VKTACYLINRSPSTAIG 580



 Score = 67.4 bits (163), Expect(2) = 7e-54
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K   L FCE CV +K+ R++F      ++ IL
Sbjct: 373 TMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHIL 432

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 433 DLIHSDV 439


>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+VSF+DDYSRR WVY ++ K +V  +F E+K ++EL TGKRIK LR+DNGG
Sbjct: 444 EISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG 503

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGI R FTV+ TPQQNGVAERMN+TLLE+ R ML   GL KSFW+EA
Sbjct: 504 EYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEA 563

Query: 54  LQYASHIINRLPSSAIG 4
           ++ A ++INR PS+AIG
Sbjct: 564 VKTACYLINRSPSTAIG 580



 Score = 67.4 bits (163), Expect(2) = 7e-54
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K   L FCE CV +K+ R++F      ++ IL
Sbjct: 373 TMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHIL 432

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 433 DLIHSDV 439


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  157 bits (396), Expect(2) = 1e-53
 Identities = 72/138 (52%), Positives = 95/138 (68%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E SM G  Y+V+F DD+SR+ WVY M+ K EV   F  WK  +E QTG++IK LRSDNG 
Sbjct: 413 EASMGGSRYFVTFTDDFSRKLWVYFMKQKSEVFSKFKLWKAEVENQTGRKIKYLRSDNGT 472

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY +  FE+ C + GI RHF+V  TPQQNGVAERMN +L E+ RC+    GL+K FW+E 
Sbjct: 473 EYTNSQFEKFCEQHGIQRHFSVRKTPQQNGVAERMNMSLTERARCLQLKAGLSKGFWAET 532

Query: 54  LQYASHIINRLPSSAIGG 1
           +  A ++INR P +++ G
Sbjct: 533 INMACYLINRSPRASLEG 550



 Score = 82.0 bits (201), Expect(2) = 1e-53
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T+LWHLRLGH  E+ +  L  + LLKG  SC ++ C+ CVL K+ RV+F    H T+GIL
Sbjct: 341 TKLWHLRLGHLSERGMMELHKRSLLKGVCSCKMDLCKYCVLGKQCRVRFKPMKHKTEGIL 400

Query: 440 EYIHTDV 420
           +Y+H+DV
Sbjct: 401 DYVHSDV 407


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  165 bits (418), Expect(2) = 1e-53
 Identities = 78/136 (57%), Positives = 103/136 (75%)
 Frame = -1

Query: 414 ETSMDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGG 235
           E S+ G  Y+VSF+DDYSRR WVY ++ K +V  +F  +K ++EL+T K+IK LR+DNGG
Sbjct: 494 EISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIKCLRTDNGG 553

Query: 234 EYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEA 55
           EY    F   C++EGIVR FTV+ TPQQNGVAERMN+TLLE+ R ML   G+ KSFW+EA
Sbjct: 554 EYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEA 613

Query: 54  LQYASHIINRLPSSAI 7
           ++ A ++INR PS+AI
Sbjct: 614 VKTACYVINRSPSTAI 629



 Score = 73.2 bits (178), Expect(2) = 1e-53
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T +WH RLGH  E+ L+ LA + LL G K+ NL FCE CV++K+ R+KF      ++ IL
Sbjct: 423 TMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEHCVISKQHRLKFARVTTRSKHIL 482

Query: 440 EYIHTDV 420
           + IH+DV
Sbjct: 483 DLIHSDV 489


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
 gb|ABF96427.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1326

 Score =  157 bits (397), Expect(2) = 2e-53
 Identities = 71/130 (54%), Positives = 94/130 (72%)
 Frame = -1

Query: 405 MDGKHYYVSFVDDYSRRNWVYTMRTKDEVLGIFVEWKKRMELQTGKRIKVLRSDNGGEYR 226
           + G  Y ++ +DDYSR+ W Y ++ KD+    F EWK R+E QT K +KVLR+DNGGE+ 
Sbjct: 501 LGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFC 560

Query: 225 SDPFEQLCREEGIVRHFTVSGTPQQNGVAERMNQTLLEKIRCMLSHEGLTKSFWSEALQY 46
           SD F+  CR+EGIVRH T+  TPQQNGVAERMN+T++ K RCMLS+  + K FW+EA   
Sbjct: 561 SDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANT 620

Query: 45  ASHIINRLPS 16
           A ++INR PS
Sbjct: 621 ACYLINRSPS 630



 Score = 80.5 bits (197), Expect(2) = 2e-53
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = -2

Query: 620 TRLWHLRLGHAGEKSLQALASQGLLKGAKSCNLEFCEECVLAKKTRVKFGTAVHNTQGIL 441
           T LWH+RLGH  E  +  L  + LL G     ++FCE CV  K  RVKF T+VH T+GIL
Sbjct: 426 TNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGIL 485

Query: 440 EYIHTDV 420
           +Y+HTD+
Sbjct: 486 DYVHTDL 492