BLASTX nr result
ID: Ophiopogon25_contig00019008
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00019008
(1378 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 107 2e-40
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 105 5e-40
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 98 3e-39
gb|AQY61302.1| Pol [Vitis vinifera] 98 4e-39
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 97 8e-39
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 97 8e-39
gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinen... 102 1e-38
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 102 2e-38
gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana] 97 4e-38
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 98 4e-38
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 97 4e-38
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 97 4e-38
gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposo... 99 8e-38
gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposo... 97 2e-37
gb|AQY61295.1| Pol [Coffea arabica] 99 2e-37
gb|AQY61297.1| Pol [Coffea canephora] 99 3e-37
gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposo... 97 1e-36
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 95 3e-36
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 97 5e-36
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 103 7e-36
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 107 bits (266), Expect(3) = 2e-40
Identities = 51/71 (71%), Positives = 64/71 (90%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
E+ RY++ LVAQ FSQRPG+DYEET+S V+D+ITFRYL+SLVV EKLD +LM V+TTYLY
Sbjct: 1003 EVVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTTYLY 1062
Query: 521 GNLDSEIHMKI 553
G+LDSEI+MK+
Sbjct: 1063 GDLDSEIYMKV 1073
Score = 74.3 bits (181), Expect(3) = 2e-40
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 582 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 761
+K R+ R K YGLK S RMWYN L +Y+ +GY NN ICPC+FIK+ +GF I+A
Sbjct: 1085 SKPRSAFSIRLKHSLYGLKQSGRMWYNRLSDYLIGKGYINNEICPCVFIKRTSSGFAIVA 1144
Query: 762 VYVDNI 779
VYVD++
Sbjct: 1145 VYVDDM 1150
Score = 35.4 bits (80), Expect(3) = 2e-40
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 1151 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 1178
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 105 bits (261), Expect(3) = 5e-40
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
E+ RY+A LVAQ FSQRPG+DY+ET+S V+D+ITFRYL+SLVV EKLD +LM V+T YLY
Sbjct: 1005 EVVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLY 1064
Query: 521 GNLDSEIHMKI 553
G+LDSEI+MK+
Sbjct: 1065 GDLDSEIYMKV 1075
Score = 75.1 bits (183), Expect(3) = 5e-40
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +3
Query: 582 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 761
+K R+ R KR YGLK S RMWYN L +Y+ +GY N+ ICPC+FIK+ +GF I+A
Sbjct: 1087 SKPRSAFSIRLKRSLYGLKQSRRMWYNRLSDYLIGKGYINDEICPCVFIKRTSSGFAIVA 1146
Query: 762 VYVDNI 779
VYVD++
Sbjct: 1147 VYVDDM 1152
Score = 35.4 bits (80), Expect(3) = 5e-40
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 1153 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 1180
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 98.2 bits (243), Expect(3) = 3e-39
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+DYEET+S V+D ITFR+LISL V E LD RLM V+T YLY
Sbjct: 875 EIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLY 934
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 935 GSMDNDIYMKI 945
Score = 81.6 bits (200), Expect(3) = 3e-39
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L K RN + + +R YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 948 GFKLPDANNTKPRNMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1007
Query: 735 FLNGFVILAVYVDNI 779
GF I+AVYVD++
Sbjct: 1008 SETGFAIIAVYVDDL 1022
Score = 33.5 bits (75), Expect(3) = 3e-39
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +++ + T +YLKKEFEM DL +T
Sbjct: 1023 NLVGTPEDLTR--TTNYLKKEFEMKDLGKT 1050
>gb|AQY61302.1| Pol [Vitis vinifera]
Length = 1223
Score = 97.8 bits (242), Expect(3) = 4e-39
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+DYEET+S V+D ITFR+LISL + E LD RLM V+T YLY
Sbjct: 738 EIIRYKARLVAQGFSQRPGIDYEETYSPVMDTITFRFLISLAISEGLDMRLMDVITAYLY 797
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 798 GSMDNDIYMKI 808
Score = 80.1 bits (196), Expect(3) = 4e-39
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L+ K R+ + + +R YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 811 GFKLSDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 870
Query: 735 FLNGFVILAVYVDNI 779
GF I+AVYVD++
Sbjct: 871 SETGFAIIAVYVDDL 885
Score = 34.7 bits (78), Expect(3) = 4e-39
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 886 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 913
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 97.4 bits (241), Expect(3) = 8e-39
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ SQRPG+DYEET+S V+D ITFR+LISL V E LD RLM V+TTYLY
Sbjct: 1011 EIIRYKARLVAQGXSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITTYLY 1070
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 1071 GSMDNDIYMKI 1081
Score = 79.7 bits (195), Expect(3) = 8e-39
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L K R+ + + +R YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 1084 GFELPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1143
Query: 735 FLNGFVILAVYVDNI 779
GF I+AVYVD++
Sbjct: 1144 SETGFAIIAVYVDDL 1158
Score = 34.7 bits (78), Expect(3) = 8e-39
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 1159 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 1186
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 96.7 bits (239), Expect(3) = 8e-39
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+DYEET+S ++D ITFR+LISL V E LD LM V+TTYLY
Sbjct: 227 EIIRYKARLVAQGFSQRPGIDYEETYSPIMDAITFRFLISLAVLEGLDMCLMDVITTYLY 286
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 287 GSMDNDIYMKI 297
Score = 80.1 bits (196), Expect(3) = 8e-39
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L + K R+ + + +R YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 300 GFKLPEANNTKPRSMYSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYVNNPICPCIFIKK 359
Query: 735 FLNGFVILAVYVDNI 779
GF I+AVYVD++
Sbjct: 360 SETGFAIIAVYVDDL 374
Score = 35.0 bits (79), Expect(3) = 8e-39
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 375 NLVGTSEELTR--TTNYLKKEFEMKDLGKT 402
>gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 725
Score = 102 bits (254), Expect(3) = 1e-38
Identities = 49/71 (69%), Positives = 62/71 (87%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
++ RY+A LVAQ FSQRPG+DYEET+ V+D+ITFRYL+SLVV EKLD +LM V+T YLY
Sbjct: 222 KVVRYKARLVAQGFSQRPGIDYEETYYPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLY 281
Query: 521 GNLDSEIHMKI 553
G+LDSEI+MK+
Sbjct: 282 GDLDSEIYMKV 292
Score = 73.2 bits (178), Expect(3) = 1e-38
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +3
Query: 582 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 761
+K R+ R +R YGLK S RMWYN L +Y+ +GY N+ ICPC+FIK+ +GF I+A
Sbjct: 304 SKPRSAFSIRLRRSLYGLKQSGRMWYNRLSDYLIGKGYVNDEICPCVFIKRTSSGFAIVA 363
Query: 762 VYVDNI 779
VYVD++
Sbjct: 364 VYVDDM 369
Score = 35.4 bits (80), Expect(3) = 1e-38
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 370 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 397
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 102 bits (254), Expect(3) = 2e-38
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPGVDYEET+S VID ITFR+LISL V E LD RLM+V+TTYLY
Sbjct: 200 EIIRYKARLVAQGFSQRPGVDYEETYSPVIDAITFRFLISLAVSEGLDMRLMNVITTYLY 259
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 260 GSIDNDIYMKI 270
Score = 77.0 bits (188), Expect(3) = 2e-38
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L + K R+ + + ++ YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 273 GFKLLEANNTKPRSIYSIKLQQSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 332
Query: 735 FLNGFVILAVYVDNI 779
FVI+AVYVD++
Sbjct: 333 SETRFVIIAVYVDDL 347
Score = 31.2 bits (69), Expect(3) = 2e-38
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ KE+ + +YL KEFEM DL +T
Sbjct: 348 NLVGTPKELIR--ITNYLNKEFEMKDLGKT 375
>gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana]
Length = 1552
Score = 96.7 bits (239), Expect(3) = 4e-38
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI R++A LVAQ FSQRPGVDYEET+S V+D TFRYLISL + E LD RLM V+T YLY
Sbjct: 1076 EIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLY 1135
Query: 521 GNLDSEIHMKI 553
G LD+EI+M++
Sbjct: 1136 GPLDNEIYMRL 1146
Score = 80.1 bits (196), Expect(3) = 4e-38
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +3
Query: 579 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 755
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 1157 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 1216
Query: 756 LAVYVDNI 779
+AVYVD++
Sbjct: 1217 IAVYVDDL 1224
Score = 32.7 bits (73), Expect(3) = 4e-38
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 1225 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 1252
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 98.2 bits (243), Expect(3) = 4e-38
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+DYEET+S V+D ITFR+LISL V E LD RLM V+T YLY
Sbjct: 895 EIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLY 954
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 955 GSMDNDIYMKI 965
Score = 76.6 bits (187), Expect(3) = 4e-38
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L K R+ + + +R YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 968 GFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1027
Query: 735 FLNGFVILAVYVDNI 779
F I+AVYVD++
Sbjct: 1028 SETRFAIIAVYVDDL 1042
Score = 34.7 bits (78), Expect(3) = 4e-38
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 1043 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 1070
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 96.7 bits (239), Expect(3) = 4e-38
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI R++A LVAQ FSQRPGVDYEET+S V+D TFRYLISL + E LD RLM V+T YLY
Sbjct: 667 EIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLY 726
Query: 521 GNLDSEIHMKI 553
G LD+EI+M++
Sbjct: 727 GPLDNEIYMRL 737
Score = 80.1 bits (196), Expect(3) = 4e-38
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +3
Query: 579 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 755
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRMNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 756 LAVYVDNI 779
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 32.7 bits (73), Expect(3) = 4e-38
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 816 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 843
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 96.7 bits (239), Expect(3) = 4e-38
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI R++A LVAQ FSQRPGVDYEET+S V+D TFRYLISL + E LD RLM V+T YLY
Sbjct: 667 EIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLY 726
Query: 521 GNLDSEIHMKI 553
G LD+EI+M++
Sbjct: 727 GPLDNEIYMRL 737
Score = 80.1 bits (196), Expect(3) = 4e-38
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +3
Query: 579 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 755
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 756 LAVYVDNI 779
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 32.7 bits (73), Expect(3) = 4e-38
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 816 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 843
>gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 814
Score = 99.0 bits (245), Expect(3) = 8e-38
Identities = 49/71 (69%), Positives = 61/71 (85%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+D+EET+S V+D TFRYLISLVV EKL+ LM V+TTYLY
Sbjct: 336 EIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLY 395
Query: 521 GNLDSEIHMKI 553
G+LD++I+MK+
Sbjct: 396 GSLDADIYMKL 406
Score = 78.6 bits (192), Expect(3) = 8e-38
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 564 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 740
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 409 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 468
Query: 741 NGFVILAVYVDNI 779
NGF I+ VYVD+I
Sbjct: 469 NGFAIIVVYVDDI 481
Score = 30.8 bits (68), Expect(3) = 8e-38
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N+IG+ KE+ K LKKEFEM DL T
Sbjct: 482 NIIGTPKELSK--AIDCLKKEFEMKDLGRT 509
>gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 834
Score = 97.1 bits (240), Expect(3) = 2e-37
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+D+EET+S V+D TFRYLISLVV EKL+ LM V+T YLY
Sbjct: 466 EIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTAYLY 525
Query: 521 GNLDSEIHMKI 553
G+LD++I+MK+
Sbjct: 526 GSLDADIYMKL 536
Score = 78.6 bits (192), Expect(3) = 2e-37
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 564 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 740
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 539 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 598
Query: 741 NGFVILAVYVDNI 779
NGF I+ VYVD+I
Sbjct: 599 NGFAIIVVYVDDI 611
Score = 31.6 bits (70), Expect(3) = 2e-37
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSETD 871
N+IG+ KE+ K LKKEFEM DL T+
Sbjct: 612 NIIGTPKELSK--AIDCLKKEFEMKDLGRTE 640
>gb|AQY61295.1| Pol [Coffea arabica]
Length = 1160
Score = 99.0 bits (245), Expect(3) = 2e-37
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YLY
Sbjct: 684 EIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLY 743
Query: 521 GNLDSEIHMKI 553
GNL+++I+M+I
Sbjct: 744 GNLENDIYMRI 754
Score = 77.0 bits (188), Expect(3) = 2e-37
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +3
Query: 555 IS*GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMF 725
IS GFN+ + + +N + + ++ YGLK S RMWYN L E +++EGY N+ ICPC+F
Sbjct: 754 ISEGFNMPEACKSNPKNIYSIKLQKSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVF 813
Query: 726 IKKFLNGFVILAVYVDNI 779
IKK + FVI+AVYVD++
Sbjct: 814 IKKNGSNFVIIAVYVDDL 831
Score = 30.8 bits (68), Expect(3) = 2e-37
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NLIG+ +EI+ + YLKKEFE+ D +T
Sbjct: 832 NLIGTLEEIQN--SVEYLKKEFEIKDFGKT 859
>gb|AQY61297.1| Pol [Coffea canephora]
Length = 1045
Score = 99.0 bits (245), Expect(3) = 3e-37
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YLY
Sbjct: 569 EIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLY 628
Query: 521 GNLDSEIHMKI 553
GNL+++I+M+I
Sbjct: 629 GNLENDIYMRI 639
Score = 76.6 bits (187), Expect(3) = 3e-37
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GFN+ + + +N + + +R YGLK S RMWYN L E +++EGY N+ ICPC+FIKK
Sbjct: 642 GFNMPEACKSNPKNIYSIKLQRSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVFIKK 701
Query: 735 FLNGFVILAVYVDNI 779
+ FVI+AVYVD++
Sbjct: 702 NGSNFVIIAVYVDDL 716
Score = 30.8 bits (68), Expect(3) = 3e-37
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NLIG+ +EI+ + YLKKEFE+ D +T
Sbjct: 717 NLIGTPEEIQN--SVEYLKKEFEIKDFGKT 744
>gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 321
Score = 96.7 bits (239), Expect(3) = 1e-36
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
EI RY+A LVAQ FSQRPG+D+EE +S V+D TFRYLISLVV EKL+ LM V+TTYLY
Sbjct: 94 EIVRYKARLVAQGFSQRPGIDFEEIYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLY 153
Query: 521 GNLDSEIHMKI 553
G+LD++I+MK+
Sbjct: 154 GSLDADIYMKL 164
Score = 78.2 bits (191), Expect(3) = 1e-36
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 564 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 740
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 167 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSE 226
Query: 741 NGFVILAVYVDNI 779
NGF I+ VYVD+I
Sbjct: 227 NGFAIIVVYVDDI 239
Score = 29.3 bits (64), Expect(3) = 1e-36
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N+IG+ +E+ K LKKEFEM DL T
Sbjct: 240 NIIGTPEELSK--VIDCLKKEFEMKDLGRT 267
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 95.1 bits (235), Expect(3) = 3e-36
Identities = 47/71 (66%), Positives = 60/71 (84%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
+I RY+A LV Q FSQRPG+DYEET+S V++ ITFR+LISL V E LD RLM V+TTYLY
Sbjct: 939 KIIRYKARLVVQGFSQRPGIDYEETYSPVMNAITFRFLISLAVSEGLDIRLMDVITTYLY 998
Query: 521 GNLDSEIHMKI 553
G++D++I+MKI
Sbjct: 999 GSMDNDIYMKI 1009
Score = 75.1 bits (183), Expect(3) = 3e-36
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 734
GF L K R+ + + +R Y LK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 1012 GFKLPDANNTKPRSMYSIKLQRSLYELKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1071
Query: 735 FLNGFVILAVYVDNI 779
GF I+ VYVD++
Sbjct: 1072 SETGFAIIVVYVDDL 1086
Score = 32.7 bits (73), Expect(3) = 3e-36
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
NL+G+ +E+ + T +YLK EFEM DL +T
Sbjct: 1087 NLVGTPEELTR--TTNYLKNEFEMKDLGKT 1114
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 96.7 bits (239), Expect(3) = 5e-36
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
E+ RY+A LVAQ FSQRPG+DY ET+S V+D ITFRYLI+L V EKL+ RLM V+T YLY
Sbjct: 428 EVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVYEKLEMRLMDVVTAYLY 487
Query: 521 GNLDSEIHMKI 553
G+LD I MKI
Sbjct: 488 GSLDHNIFMKI 498
Score = 74.7 bits (182), Expect(3) = 5e-36
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 576 TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVI 755
T R T + ++ YGLK S RMWYN L EY+ ++GY N+SICPC+FIK+ + FVI
Sbjct: 507 TYKDSRETCSIKLQKSLYGLKQSGRMWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFVI 566
Query: 756 LAVYVDNI 779
+AVYVD++
Sbjct: 567 IAVYVDDL 574
Score = 30.8 bits (68), Expect(3) = 5e-36
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 779 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 868
N+IG+RKE+ + LK+EFEM DL +T
Sbjct: 575 NIIGTRKELLE--AVECLKREFEMKDLGKT 602
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 103 bits (257), Expect(2) = 7e-36
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = +2
Query: 341 EIQRYEAYLVAQRFSQRPGVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLY 520
E+ Y+A LVAQ FSQRPG+DYEET+S V+D+ITFRYL+SLVV EKLD +LM V+T YLY
Sbjct: 371 EVLLYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLY 430
Query: 521 GNLDSEIHMKI 553
G+LDSEI+MK+
Sbjct: 431 GDLDSEIYMKV 441
Score = 77.8 bits (190), Expect(2) = 7e-36
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +3
Query: 576 TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVI 755
+ +K R+ + R +R YGLK S RMWY L +Y+ REGY N+ +CPC+FIKK +GF I
Sbjct: 451 SNSKPRSAYAIRLQRSLYGLKQSGRMWYTRLSDYLIREGYKNDELCPCVFIKKTSSGFAI 510
Query: 756 LAVYVDNI 779
+AVYVD++
Sbjct: 511 VAVYVDDM 518