BLASTX nr result
ID: Ophiopogon25_contig00018958
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon25_contig00018958 (944 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu... 293 2e-92 gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 293 5e-91 gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 288 4e-87 emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 286 8e-87 emb|CDP17738.1| unnamed protein product [Coffea canephora] 272 2e-81 gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus... 236 5e-73 gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 249 7e-72 gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 235 8e-72 ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116... 221 2e-68 gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 233 1e-67 gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 236 1e-66 gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 236 1e-66 gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagu... 218 2e-66 gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 221 9e-64 gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo... 216 2e-62 gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 217 3e-62 gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 220 8e-62 gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 222 1e-61 gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 221 3e-61 gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 221 3e-61 >gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis] Length = 499 Score = 293 bits (749), Expect = 2e-92 Identities = 157/316 (49%), Positives = 204/316 (64%), Gaps = 3/316 (0%) Frame = +1 Query: 4 LTLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 LTLINGR+++SY EVT+AL+N+ LR++ E SG+AL+ RGRSPN Sbjct: 51 LTLINGRTTVSYKEVTSALVNYELRKNDGELFERASGDALAVRGRSPNRQRFNHSKSKNR 110 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGN--DSD 357 VG++QCAFCKE GHWK +C KL+++ K Q+ KA ++SEVNVA G+ D D Sbjct: 111 GDHKS--VGRNQCAFCKEEGHWKNECPKLKDRVGK-QRGKAVQASEVNVAKVIGDTSDLD 167 Query: 358 SSNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESG-VVVMGNDQACQMQ 534 SS YSC +C ADS EWMLDSGA +H+ P RDWF+ F+ LE G VV+MGND C + Sbjct: 168 SSGYSCPTLLSVCYADSTEWMLDSGAIFHIYPKRDWFTNFKELERGDVVLMGNDHVCPIS 227 Query: 535 GMGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKM 714 G+ S+RI+M D V REL+ E+ LKV KGS+V M Sbjct: 228 GISSVRIRMLDEVTRELKEE-------------------------EDATLKVMKGSMVVM 262 Query: 715 KGVRDRNLYFLQGTTVTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGT 894 +GVR+ NLY+L+G TVTG L AS+ + DT+ LWH+RLG+T +KSLQ LAK LLKGA T Sbjct: 263 RGVRENNLYYLKGKTVTGGLTASITTEEDTTILWHLRLGYTGDKSLQLLAKHELLKGAKT 322 Query: 895 CKVDFCEHCVLGKKTR 942 CK++ EHC+LGKKT+ Sbjct: 323 CKMELSEHCILGKKTK 338 >gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis] Length = 631 Score = 293 bits (749), Expect = 5e-91 Identities = 162/315 (51%), Positives = 207/315 (65%), Gaps = 1/315 (0%) Frame = +1 Query: 1 VLTLINGRSSISYSEVTAALINHGLRQSYKESS-GSRSGEALSARGRSPNXXXXXXXXXX 177 VL L+NGRSSI YSEVT AL N+ LR+ KE+S S SGE LS RGR+P Sbjct: 140 VLILLNGRSSIIYSEVTNALTNYDLRRKDKETSRASTSGETLSTRGRNP---YPKGGNRG 196 Query: 178 XXXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSD 357 + K+QCAFCKE HWK+DC KL+EK ++ K+K K++EVNVA +G+DSD Sbjct: 197 RSKSRSHHQLAKNQCAFCKEQEHWKRDCPKLKEK--ENCKKKGPKANEVNVA--KGDDSD 252 Query: 358 SSNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQG 537 S +S ITPE+ D ++WMLDSGATYHV P RDWF++FE+++ GVVVMGNDQ C + Sbjct: 253 DSCFSLLITPEVNHVDVLDWMLDSGATYHVTPRRDWFASFEKVDGGVVVMGNDQFCSVCW 312 Query: 538 MGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMK 717 +G++RI+MHDGVVREL+ VR+VPQLKKN+IS+GALE+ K Sbjct: 313 IGTVRIRMHDGVVRELKEVRFVPQLKKNIISVGALEAKRFK------------------- 353 Query: 718 GVRDRNLYFLQGTTVTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTC 897 G+T +A ++ + D S+LWH RLGHTSE SLQ L KQ LLKGA + Sbjct: 354 -----------GSTEISQVALAIS-EADISKLWHYRLGHTSENSLQILCKQRLLKGAKSG 401 Query: 898 KVDFCEHCVLGKKTR 942 K++FCEHCVLGKKT+ Sbjct: 402 KIEFCEHCVLGKKTK 416 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 288 bits (737), Expect = 4e-87 Identities = 153/316 (48%), Positives = 200/316 (63%), Gaps = 4/316 (1%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYK-ESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 TL++G+ ++S V +AL +H LR+ K ++ + S EAL ARGR + Sbjct: 103 TLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERRGMSKSK 162 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSS 363 V KD+CAFC E GHWKKDC KL++K K Q + NVA + + Sbjct: 163 GRA----VAKDECAFCHEKGHWKKDCPKLQKKEKVLQ--------DANVAECKSDVESDI 210 Query: 364 NYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMG 543 + S++ + L EW+LDSG TYH+CP RDWF F+ L+ GVV MGND C+ G+G Sbjct: 211 SLIVSLSASLYLD---EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIG 267 Query: 544 SIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGV 723 SI+++ HDG R L +VRYVP+LKKNLISLGALES G V M +G+LK T G+LV +KGV Sbjct: 268 SIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGV 327 Query: 724 RDRNLYFLQGTTVTGALAA---SVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGT 894 NLY+ QG+TV G +AA S +D + ++LWHMRLGH EKSLQ KQGLLKG Sbjct: 328 MKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKA 387 Query: 895 CKVDFCEHCVLGKKTR 942 CK++FCEHCVLGK+ R Sbjct: 388 CKLEFCEHCVLGKQRR 403 >emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 813 Score = 286 bits (732), Expect = 8e-87 Identities = 157/320 (49%), Positives = 202/320 (63%), Gaps = 8/320 (2%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYK-ESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 TL++G+ ++S V +AL +H LR+ K + + S EAL RGR + Sbjct: 102 TLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTSEEALVIRGRQQSQTKERRGMSKSK 161 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGN-DSDS 360 V KD+CAFC E GHWKKDC KL++K K Q + NVA + + +SD Sbjct: 162 GRV----VAKDECAFCHEKGHWKKDCPKLQKKEKVPQ--------DANVAECKSDVESDI 209 Query: 361 S---NYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQM 531 S + S S P+ EW+LDSG TYH+CP RDWF F+ L+ GVV MGND C+ Sbjct: 210 SLIVSLSASSYPD-------EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKT 262 Query: 532 QGMGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVK 711 G+GSI+++ HDG R L +VRYVP+LKKNLISLGALES G V M +G+LK T G+LV Sbjct: 263 VGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVM 322 Query: 712 MKGVRDRNLYFLQGTTVTGALAA---SVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLK 882 +KGV NLY+ QG+TV G +AA S +D + ++LWHMRLGH EKSLQ L KQGLLK Sbjct: 323 LKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLK 382 Query: 883 GAGTCKVDFCEHCVLGKKTR 942 G CK++FCEHCVLGK+ R Sbjct: 383 GTKACKLEFCEHCVLGKQRR 402 >emb|CDP17738.1| unnamed protein product [Coffea canephora] Length = 798 Score = 272 bits (695), Expect = 2e-81 Identities = 148/317 (46%), Positives = 201/317 (63%), Gaps = 5/317 (1%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLR-QSYKESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 TL++G+ ++S V +AL + LR Q K+ + + EAL ARGR + Sbjct: 189 TLLHGKENVSLDAVCSALYSRELRKQDKKKKKVAAADEALVARGRQQSQSKGRRGWSKSI 248 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSS 363 V KD+CAFC+E GHWKKDC KL++K K Q +VNVA E S Sbjct: 249 SR-----VAKDECAFCREKGHWKKDCPKLKKKGKAPQ--------DVNVA--ECKSDAES 293 Query: 364 NYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMG 543 ++S +++ D EW+LDS TYH+ P R+WF FE L+ G V MGND C+ G+G Sbjct: 294 DFSLAVSRLTSHPD--EWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIG 351 Query: 544 SIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGV 723 SI+++ HDG R L++VRYVP LK++LISLG LES G +V M +G+LKVT G+L+ +KGV Sbjct: 352 SIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGV 411 Query: 724 RDRNLYFLQGTTVTG----ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAG 891 R NLY+ QG+TV G A ++S +D + ++LWHMRLG EKSLQ+LAKQGLLKG Sbjct: 412 RKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTK 471 Query: 892 TCKVDFCEHCVLGKKTR 942 CK++FCEHCVL K+ + Sbjct: 472 VCKLEFCEHCVLEKQRK 488 >gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus officinalis] Length = 286 Score = 236 bits (601), Expect = 5e-73 Identities = 126/274 (45%), Positives = 175/274 (63%), Gaps = 3/274 (1%) Frame = +1 Query: 1 VLTLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXX 180 V +IN R+++SY EVT+ LIN+ LR+ E S SG+AL+ R Sbjct: 50 VFNMINERTTVSYKEVTSVLINYELRKGDGEPSEKASGDALAVRE--------------- 94 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVA--TSEGNDS 354 GHWK +C L+++ K Q+ KA ++ EVNVA S+ +DS Sbjct: 95 --------------------GHWKNECPNLKDRAWK-QRGKAVQALEVNVAKAVSDHSDS 133 Query: 355 DSSNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESG-VVVMGNDQACQM 531 D S+YSC P +C ADS EWM+DSGAT+ +CP DWFS+FE LE G VV+M ND C + Sbjct: 134 DYSDYSCPALPSVCYADSTEWMMDSGATFRICPKSDWFSSFEELERGDVVLMENDHVCSI 193 Query: 532 QGMGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVK 711 G+ ++RI MHDGV REL+ VR+VPQL KN+ISLG LE+ G++V++E+ +KVTKGS++ Sbjct: 194 GGISTVRIMMHDGVTRELKEVRFVPQL-KNIISLGTLEAAGYRVILEDATVKVTKGSMLV 252 Query: 712 MKGVRDRNLYFLQGTTVTGALAASVDRDVDTSRL 813 ++ VR+ NLY+L+G TVTGAL AS+ + DT+ L Sbjct: 253 IRDVRESNLYYLKGKTVTGALTASITTEKDTTTL 286 >gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1032 Score = 249 bits (637), Expect = 7e-72 Identities = 131/249 (52%), Positives = 167/249 (67%), Gaps = 3/249 (1%) Frame = +1 Query: 205 VGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSSNYSCSIT 384 VGKD+CAFC+E GHWKKDC KL KNK K A + NVA +DSD CS+ Sbjct: 15 VGKDECAFCREKGHWKKDCPKL--KNKGQSKTVA----DSNVAEYV-DDSD-----CSLA 62 Query: 385 PEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMGSIRIKMH 564 + S W+LDSG + H+CP+R+WF F LE GVV ND G+GSIR+K Sbjct: 63 VSGSTSSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNR 122 Query: 565 DGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGVRDRN-LY 741 DG +R L++VR+VP L +NLIS+GALE G V E GV+K+ G+LV MKGVR N LY Sbjct: 123 DGAIRTLKDVRFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVMKGVRKNNRLY 182 Query: 742 FLQGTTV--TGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTCKVDFCE 915 + QGTT+ T A+A+S ++++++++LWHMRLGH E+SL L KQGLLK CK+DFCE Sbjct: 183 YYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCE 242 Query: 916 HCVLGKKTR 942 HCV GKKTR Sbjct: 243 HCVKGKKTR 251 >gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] Length = 365 Score = 235 bits (600), Expect = 8e-72 Identities = 129/315 (40%), Positives = 191/315 (60%), Gaps = 1/315 (0%) Frame = +1 Query: 1 VLTLINGRSSISYSEVTAALINHGLRQSYKESSG-SRSGEALSARGRSPNXXXXXXXXXX 177 V T++ G+ ++ EV A L+++ +R K+S+G S + + RGRS N Sbjct: 49 VTTILYGKDTLKVEEVNATLLSNEVRN--KQSTGESLTVKTSQDRGRSKNKFGNQYRYRS 106 Query: 178 XXXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSD 357 ++C +CK+ GHWK+DC K K+K+ Q++K+ E +VA+ DS+ Sbjct: 107 ISKE------NDNRCYYCKKEGHWKRDCPK---KSKQQQQKKS--GEEASVASRLEKDSE 155 Query: 358 SSNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQG 537 + C+ + C+ S W+LDS +YH+CP RDWFST+ + G V+MGN+ C+ G Sbjct: 156 TL---CTFS---CMDSSDSWILDSDCSYHMCPFRDWFSTYSIHDGGRVIMGNNSECKSVG 209 Query: 538 MGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMK 717 +G+I+IKM DGV+R L VR+VP L+K LISLG L++ G + +G++KV KG+ V MK Sbjct: 210 IGTIKIKMFDGVIRTLTEVRHVPDLRKGLISLGTLDASGCTFIGSDGIIKVKKGAPVVMK 269 Query: 718 GVRDRNLYFLQGTTVTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTC 897 G + +LY L G T+TG +A + D D + LWH RLGH SE+ L L + LLKG +C Sbjct: 270 GEKIESLYRLIGKTITGDIAVTSSTDDDDTMLWHARLGHMSERGLLELHNRKLLKGIKSC 329 Query: 898 KVDFCEHCVLGKKTR 942 K+DFCE CVLGK+ R Sbjct: 330 KIDFCEFCVLGKQCR 344 >ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya hassleriana] Length = 209 Score = 221 bits (563), Expect = 2e-68 Identities = 103/176 (58%), Positives = 134/176 (76%), Gaps = 2/176 (1%) Frame = +1 Query: 421 LDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMGSIRIKMHDGVVRELENVRY 600 +DSG TYH+C +++WF FE L+ GVV MGN+ A Q G+GSIR++ HDG R L VRY Sbjct: 1 MDSGCTYHMCFNKEWFFNFEELDGGVVYMGNNDALQATGIGSIRLRCHDGTTRILTEVRY 60 Query: 601 VPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGVRDRNLYFLQGTTVTG--AL 774 VP LKKNLISLG LES G+ V + +G+LKV G+LV +KGVR NLY+ +G+TV G A+ Sbjct: 61 VPNLKKNLISLGTLESKGYTVTIRDGILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAV 120 Query: 775 AASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTCKVDFCEHCVLGKKTR 942 A D+D + +RLWHMRLGH EK+LQ+L KQG+LKGA CK++FCEHCVLGK+++ Sbjct: 121 TAGEDKDSEVTRLWHMRLGHPGEKALQNLVKQGVLKGARLCKLEFCEHCVLGKQSK 176 >gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 690 Score = 233 bits (594), Expect = 1e-67 Identities = 127/314 (40%), Positives = 182/314 (57%), Gaps = 1/314 (0%) Frame = +1 Query: 4 LTLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 + L + ++S+ +V + L++ + + GE LS RGR+ Sbjct: 163 IMLYSNNDTLSFEDVKSNLLSK--EKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSK 220 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSS 363 C +CK+ GH DC L++K ++ +K K + NV T D Sbjct: 221 SRGRK---SNKTCRYCKKFGHDISDCFILKKKQERQEKGK-NPAEAANVETDSDGD---- 272 Query: 364 NYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMG 543 I+ EW+LDSG T+H+CP++D F+T E ++SGVV+MGND C++ G+G Sbjct: 273 ---VMISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIG 329 Query: 544 SIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGV 723 +I+IK HDG ++ L NVR++P LK+NLISLG LES+G K E GVLKV+KG++V +K Sbjct: 330 TIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKAN 389 Query: 724 RDRNLYFLQGTTVTGALAASVD-RDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTCK 900 R +LY LQG+ VTG+ A S D D ++LWHMRLGH SEK + L+KQGLL G K Sbjct: 390 RIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGK 449 Query: 901 VDFCEHCVLGKKTR 942 ++FCEHCV GK+ R Sbjct: 450 LEFCEHCVFGKQKR 463 >gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense] Length = 1841 Score = 236 bits (603), Expect = 1e-66 Identities = 135/318 (42%), Positives = 197/318 (61%), Gaps = 6/318 (1%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYK-ESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 T++ GR ++ EV AL + LR+ + + GE L ARGRS Sbjct: 686 TMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRS 745 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSS 363 + QC +CK+ GH K DC K +EK++ +++ + NVA D+DSS Sbjct: 746 QSKK-----RIQCYYCKKYGHMKVDCPKRKEKSESQEQQ----NDRANVA-----DADSS 791 Query: 364 NYSCSITPEICLADSV---EWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQ 534 + + + + ++DS W+LD+GAT+H+ +D FST+E+ SG V+MGND ACQ+ Sbjct: 792 SDAEIV---LAVSDSYAGGRWILDTGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVM 847 Query: 535 GMGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKM 714 G+G++RIKM DG+VR L +VR++P++KKNLISL L+ G + E GVLKV G+L + Sbjct: 848 GIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVI 907 Query: 715 KGVRDRNLYFLQGTTVTG--ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGA 888 +G +R LYFL G++VTG +++S D D DT++LWHMRLGH SE+ L L+K+GLL G Sbjct: 908 RGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQ 967 Query: 889 GTCKVDFCEHCVLGKKTR 942 T K++FCEHCV GK+TR Sbjct: 968 CTGKLNFCEHCVFGKQTR 985 >gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense] Length = 2351 Score = 236 bits (603), Expect = 1e-66 Identities = 135/318 (42%), Positives = 197/318 (61%), Gaps = 6/318 (1%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYK-ESSGSRSGEALSARGRSPNXXXXXXXXXXXX 183 T++ GR ++ EV AL + LR+ + + GE L ARGRS Sbjct: 665 TMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRS 724 Query: 184 XXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSS 363 + QC +CK+ GH K DC K +EK++ +++ + NVA D+DSS Sbjct: 725 QSKK-----RIQCYYCKKYGHMKVDCPKRKEKSESQEQQ----NDRANVA-----DADSS 770 Query: 364 NYSCSITPEICLADSV---EWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQ 534 + + + + ++DS W+LD+GAT+H+ +D FST+E+ SG V+MGND ACQ+ Sbjct: 771 SDAEIV---LAVSDSYAGGRWILDTGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVM 826 Query: 535 GMGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKM 714 G+G++RIKM DG+VR L +VR++P++KKNLISL L+ G + E GVLKV G+L + Sbjct: 827 GIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVI 886 Query: 715 KGVRDRNLYFLQGTTVTG--ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGA 888 +G +R LYFL G++VTG +++S D D DT++LWHMRLGH SE+ L L+K+GLL G Sbjct: 887 RGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQ 946 Query: 889 GTCKVDFCEHCVLGKKTR 942 T K++FCEHCV GK+TR Sbjct: 947 CTGKLNFCEHCVFGKQTR 964 >gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagus officinalis] Length = 267 Score = 218 bits (556), Expect = 2e-66 Identities = 113/208 (54%), Positives = 149/208 (71%) Frame = +1 Query: 250 KKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSSNYSCSITPEICLADSVEWMLDS 429 ++DC KL+EK ++ K+ +K++EVNVA + DSD +S ITPE+ D+ WMLDS Sbjct: 64 ERDCPKLKEK--ENSKKNGSKANEVNVARDD--DSDDLCFSLLITPEVNHVDASNWMLDS 119 Query: 430 GATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMGSIRIKMHDGVVRELENVRYVPQ 609 GA+YHV P RDWF++FERL+ GVVVMGNDQ+C + +G+IRI+MHDGVVREL VR+VPQ Sbjct: 120 GASYHVTPRRDWFASFERLDGGVVVMGNDQSCGIYRIGTIRIQMHDGVVRELNEVRFVPQ 179 Query: 610 LKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGVRDRNLYFLQGTTVTGALAASVD 789 LK NLIS+ ALE+ G K+ EN V KVTKGSLV M VR RNLY+L+G+T G L ++ Sbjct: 180 LKMNLISVRALEAKGFKMTFENAVAKVTKGSLVVMNRVRSRNLYYLKGSTEIGQLDLAIS 239 Query: 790 RDVDTSRLWHMRLGHTSEKSLQSLAKQG 873 + + SRL H RLGHT + + +G Sbjct: 240 -EANESRLLHYRLGHTGKSHCRLCTSRG 266 >gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 593 Score = 221 bits (562), Expect = 9e-64 Identities = 123/316 (38%), Positives = 181/316 (57%), Gaps = 2/316 (0%) Frame = +1 Query: 1 VLTLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXX 180 V +L G+ I+ EV ++L + LR +S +G L A + N Sbjct: 147 VNSLSVGKECITMEEVKSSLHSRELRFKASANSEGVNGAGLLAFNSTTNGKKKKEQGKKK 206 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDS 360 +D C +CKE GHWKKDC K K++QK + E + +E S Sbjct: 207 TKVNP-----RDICNYCKEPGHWKKDCPK-----KRNQKSVVVAAQEDSSFENELVLSIV 256 Query: 361 SNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGM 540 N+ + +W+LDSG +YH+CP+R WF T+E+ G V MGND AC+ + Sbjct: 257 DNHQHFVE---------QWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISI 307 Query: 541 GSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKG 720 G+I+IKMHDGV+R L VR+VP LKKNLIS+G L++ G K +E GV+++ KGS + ++G Sbjct: 308 GTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRG 367 Query: 721 VRDRNLYFLQGTT--VTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGT 894 ++ NLY LQG+T ++ +++ + +D +RLWHMRLGH SE+ + L+KQ LL+ Sbjct: 368 IKKGNLYMLQGSTNLISESISVADKHTLDLTRLWHMRLGHMSERGMMVLSKQKLLRDHTV 427 Query: 895 CKVDFCEHCVLGKKTR 942 ++ FCEHCVLGK R Sbjct: 428 KELKFCEHCVLGKHHR 443 >gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 561 Score = 216 bits (551), Expect = 2e-62 Identities = 123/276 (44%), Positives = 169/276 (61%), Gaps = 3/276 (1%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXXXX 186 TL++G+ ++S +EV AL ++ LR+ K+ S ++ EAL ARGR Sbjct: 142 TLLHGKVAVSLNEVCGALYSYELRRKDKKDSSEKANEALVARGRP-----VIQAKGKKKR 196 Query: 187 XXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSSN 366 VGKD+CAFC+E GHWKKDC KL KNK K A + NVA +DSD Sbjct: 197 SKSKAKVGKDECAFCREKGHWKKDCPKL--KNKGQSKTVA----DSNVAEYV-DDSD--- 246 Query: 367 YSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMGS 546 CS+ + S W+LDSG + H+CP+R+WF F LE GVV ND G+GS Sbjct: 247 --CSLAVSGSTSSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGS 304 Query: 547 IRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGVR 726 IR+K DG +R L++VR+VP L +NLIS+GALE G V E GV+K+ G+LV MKGVR Sbjct: 305 IRLKNRDGAIRTLKDVRFVPSLSRNLISVGALEDKGFTVHAEGGVMKIISGALVVMKGVR 364 Query: 727 DRN-LYFLQGTTV--TGALAASVDRDVDTSRLWHMR 825 N LY+ QGTT+ T A+A+S ++++++++LWHMR Sbjct: 365 KNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMR 400 >gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 609 Score = 217 bits (553), Expect = 3e-62 Identities = 111/246 (45%), Positives = 157/246 (63%), Gaps = 2/246 (0%) Frame = +1 Query: 211 KDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDSSNYSCSITPE 390 +D C +CKE GHWKKDC K K++QK A + E + +E S N+ S Sbjct: 160 RDICNYCKEPGHWKKDCPK-----KRNQKSVAVAAQEDSSFENELVLSIVDNHQHS---- 210 Query: 391 ICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGMGSIRIKMHDG 570 + +W+LDSG +YH+CP+R WF T+E+ G V MGND AC+ G+G+I+IKMHDG Sbjct: 211 -----AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDG 265 Query: 571 VVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMKGVRDRNLYFLQ 750 V+R L VR+VP LKKNLIS+G L + G K +E GV++++KGS V ++G++ NLY LQ Sbjct: 266 VIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQ 325 Query: 751 GTT--VTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAGTCKVDFCEHCV 924 G+T ++ +++ + D + LWHMRLGH SE+ + L KQ LL ++ FCEHCV Sbjct: 326 GSTNLISESVSVADKHTPDLTHLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCV 385 Query: 925 LGKKTR 942 +GK R Sbjct: 386 VGKHHR 391 >gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] Length = 876 Score = 220 bits (561), Expect = 8e-62 Identities = 126/317 (39%), Positives = 182/317 (57%), Gaps = 3/317 (0%) Frame = +1 Query: 1 VLTLINGRSSISYSEVTAALINHGLRQSYKESSGSRSGEALSARGRSPNXXXXXXXXXXX 180 V TL G+ SI+ + +T+AL++HG R+ E G GE L +G S Sbjct: 89 VTTLTYGKDSITLTSITSALLSHGQRRQNAE--GGSQGEGLYVQGCSDRGRNKGKAGSGK 146 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDS 360 +C CK+IGHWK+DC +++ + S T S SEG+ Sbjct: 147 KRSKSKNRK-TSECYSCKQIGHWKRDCPNIKQGSSTSANLVHTDDS-----CSEGDILCV 200 Query: 361 SNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVVMGNDQACQMQGM 540 S+ C+ W+LDSG +YH+ P+R+WF+TF G V +G+D+AC + G+ Sbjct: 201 SSSKCTDA----------WILDSGCSYHMTPNREWFTTFRSGSFGFVYLGDDKACAITGI 250 Query: 541 GSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMG--HKVVMENGVLKVTKGSLVKM 714 G I+I M DG VR L NVRY+P+L+KNLISLG L+ G ++ + +LKV+KG+L M Sbjct: 251 GQIKIAMDDGGVRTLTNVRYIPELRKNLISLGTLQENGYSYRSDRDRDILKVSKGALTVM 310 Query: 715 KGVRDR-NLYFLQGTTVTGALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKGAG 891 + R N+Y L G TV G + ASV+ D D ++LWH+RLGH SE+ + L K+ LLKG Sbjct: 311 RVKRTAGNIYKLLGNTVVGDV-ASVESDNDATKLWHLRLGHLSERGMMELHKRSLLKGVC 369 Query: 892 TCKVDFCEHCVLGKKTR 942 +CK+D C++CVLGK+ R Sbjct: 370 SCKMDLCKYCVLGKQCR 386 >gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1373 Score = 222 bits (565), Expect = 1e-61 Identities = 125/319 (39%), Positives = 185/319 (57%), Gaps = 7/319 (2%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYKESSGSRS--GEALSARGRSPNXXXXXXXXXXX 180 T++ R ++ EV AL N + ++ GS S GEAL RGR+ N Sbjct: 159 TILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR 218 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDS 360 K C +CK H +CKK++ K +K++K+ +V+VA++ +D DS Sbjct: 219 GRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKD-----GKVSVASAAASDDDS 273 Query: 361 SNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVV-MGNDQACQMQG 537 + C + C+A EW+LDS ++H+C R+WFS+++ ++ G VV MG+D C + G Sbjct: 274 GD--CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVG 331 Query: 538 MGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMK 717 +GS++IK DG+ R L+NVRY+P + +NLISL L++ G+K +GVLKV+KGSLV +K Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391 Query: 718 G-VRDRNLYFLQGTTVTG---ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKG 885 G V LY L+G T+TG A AA + + + LWHMRLGH S + L K+ LLKG Sbjct: 392 GDVNSAKLYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKG 451 Query: 886 AGTCKVDFCEHCVLGKKTR 942 + K+ FCEHC+ GK R Sbjct: 452 CTSSKIKFCEHCIFGKHKR 470 >gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 221 bits (562), Expect = 3e-61 Identities = 124/319 (38%), Positives = 185/319 (57%), Gaps = 7/319 (2%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYKESSGSRS--GEALSARGRSPNXXXXXXXXXXX 180 T++ R ++ EV AL N + ++ GS S GEAL RGR+ N Sbjct: 159 TILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR 218 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDS 360 K C +CK H +CKK++ K +K++K+ +V+VA++ +D DS Sbjct: 219 GRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKD-----GKVSVASAAASDDDS 273 Query: 361 SNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVV-MGNDQACQMQG 537 + C + C+A EW+LDS ++H+C R+WFS+++ ++ G VV MG+D C + G Sbjct: 274 GD--CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVG 331 Query: 538 MGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMK 717 +GS++IK DG+ R L+NVRY+P + +NLISL L++ G+K +GVLKV+KGSLV +K Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391 Query: 718 G-VRDRNLYFLQGTTVTG---ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKG 885 G + LY L+G T+TG A AA + + + LWHMRLGH S + L K+ LLKG Sbjct: 392 GDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKG 451 Query: 886 AGTCKVDFCEHCVLGKKTR 942 + K+ FCEHC+ GK R Sbjct: 452 CTSSKIKFCEHCIFGKHKR 470 >gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 221 bits (562), Expect = 3e-61 Identities = 124/319 (38%), Positives = 185/319 (57%), Gaps = 7/319 (2%) Frame = +1 Query: 7 TLINGRSSISYSEVTAALINHGLRQSYKESSGSRS--GEALSARGRSPNXXXXXXXXXXX 180 T++ R ++ EV AL N + ++ GS S GEAL RGR+ N Sbjct: 159 TILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR 218 Query: 181 XXXXXXXXVGKDQCAFCKEIGHWKKDCKKLREKNKKSQKEKATKSSEVNVATSEGNDSDS 360 K C +CK H +CKK++ K +K++K+ +V+VA++ +D DS Sbjct: 219 GRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKD-----GKVSVASAAASDDDS 273 Query: 361 SNYSCSITPEICLADSVEWMLDSGATYHVCPHRDWFSTFERLESGVVV-MGNDQACQMQG 537 + C + C+A EW+LDS ++H+C R+WFS+++ ++ G VV MG+D C + G Sbjct: 274 GD--CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVG 331 Query: 538 MGSIRIKMHDGVVRELENVRYVPQLKKNLISLGALESMGHKVVMENGVLKVTKGSLVKMK 717 +GS++IK DG+ R L+NVRY+P + +NLISL L++ G+K +GVLKV+KGSLV +K Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391 Query: 718 G-VRDRNLYFLQGTTVTG---ALAASVDRDVDTSRLWHMRLGHTSEKSLQSLAKQGLLKG 885 G + LY L+G T+TG A AA + + + LWHMRLGH S + L K+ LLKG Sbjct: 392 GDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKG 451 Query: 886 AGTCKVDFCEHCVLGKKTR 942 + K+ FCEHC+ GK R Sbjct: 452 CTSSKIKFCEHCIFGKHKR 470