BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00018691
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMZ74765.1| putative Pentatricopeptide repeat-containing prot...    55   2e-06

>gb|KMZ74765.1| putative Pentatricopeptide repeat-containing protein [Zostera
           marina]
          Length = 274

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RFTNSPASFDWSXXXXXXAQEPDAKTLSKPQQIDKSKLPPPYDPFSKK 396
           RFTN+ ASFDWS       ++ ++KT S P  IDK+KLPPPYDPF+KK
Sbjct: 39  RFTNTEASFDWSDSDDE-GKKGESKT-SSPAVIDKTKLPPPYDPFNKK 84