BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00018672
         (883 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   488   e-157
ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   488   e-157
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   401   e-124
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   382   e-118
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   382   e-118
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   382   e-118
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   382   e-118
gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [...   354   e-117
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   374   e-115
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   357   e-115
gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [...   348   e-114
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   369   e-113
gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]      348   e-111
gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]      348   e-109
gb|AQK94722.1| Protein RNA-directed DNA methylation 3 [Zea mays]      348   e-109
ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Seta...   357   e-109

>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  488 bits (1257), Expect = e-157
 Identities = 239/294 (81%), Positives = 265/294 (90%), Gaps = 1/294 (0%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +SKGTWVRMK+GNYKGDLGQV+DYDD RK+ATIKLVPRIDLQAIAKK+GGGVSLKE
Sbjct: 183  KACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKE 242

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FRSHIEIRRDRH+GE FEILDGLMLKDGYLYKKVSIASIV+WGV
Sbjct: 243  AAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGV 302

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            +PSKDELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ +D+KG+SE+GN FNLHDLVLF
Sbjct: 303  EPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLF 362

Query: 343  GRKGFGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYIND 167
            GRK FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS+CVDKMFTASDRHRKTI IND
Sbjct: 363  GRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICIND 422

Query: 166  SVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
             +KV +GPLEGR+GT  HMYKGTLFIYDE+QE NSG+FC KSDLCE  TP KDS
Sbjct: 423  IIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKDS 476


>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  488 bits (1257), Expect = e-157
 Identities = 239/294 (81%), Positives = 265/294 (90%), Gaps = 1/294 (0%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +SKGTWVRMK+GNYKGDLGQV+DYDD RK+ATIKLVPRIDLQAIAKK+GGGVSLKE
Sbjct: 202  KACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKE 261

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FRSHIEIRRDRH+GE FEILDGLMLKDGYLYKKVSIASIV+WGV
Sbjct: 262  AAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGV 321

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            +PSKDELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ +D+KG+SE+GN FNLHDLVLF
Sbjct: 322  EPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLF 381

Query: 343  GRKGFGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYIND 167
            GRK FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS+CVDKMFTASDRHRKTI IND
Sbjct: 382  GRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICIND 441

Query: 166  SVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
             +KV +GPLEGR+GT  HMYKGTLFIYDE+QE NSG+FC KSDLCE  TP KDS
Sbjct: 442  IIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKDS 495


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  405 bits (1040), Expect = e-125
 Identities = 192/286 (67%), Positives = 233/286 (81%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+
Sbjct: 240  KSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQ 299

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W V
Sbjct: 300  AAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAV 359

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLF
Sbjct: 360  QPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLF 419

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G K FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+
Sbjct: 420  GHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDT 479

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCEN 26
            VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN
Sbjct: 480  VKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCEN 525


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  405 bits (1040), Expect = e-125
 Identities = 192/286 (67%), Positives = 233/286 (81%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+
Sbjct: 240  KSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQ 299

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W V
Sbjct: 300  AAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAV 359

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLF
Sbjct: 360  QPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLF 419

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G K FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+
Sbjct: 420  GHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDT 479

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCEN 26
            VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN
Sbjct: 480  VKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCEN 525


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  405 bits (1040), Expect = e-125
 Identities = 192/286 (67%), Positives = 233/286 (81%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+
Sbjct: 242  KSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQ 301

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W V
Sbjct: 302  AAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAV 361

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLF
Sbjct: 362  QPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLF 421

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G K FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+
Sbjct: 422  GHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDT 481

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCEN 26
            VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN
Sbjct: 482  VKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCEN 527


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  405 bits (1040), Expect = e-125
 Identities = 192/286 (67%), Positives = 233/286 (81%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+
Sbjct: 242  KSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQ 301

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W V
Sbjct: 302  AAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAV 361

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLF
Sbjct: 362  QPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLF 421

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G K FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+
Sbjct: 422  GHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDT 481

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCEN 26
            VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN
Sbjct: 482  VKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCEN 527


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  401 bits (1030), Expect = e-124
 Identities = 191/291 (65%), Positives = 234/291 (80%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C +S+G+WVRMK+G YKGDL QV+  DD +K+  +KLVPR+DLQAI+KK+GGGVSLK+
Sbjct: 238  KSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLVPRVDLQAISKKFGGGVSLKQ 297

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE FR HIE+RRDR TGE FEILDGLMLKDG+LYK+VSI S++ WGV
Sbjct: 298  AAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFEILDGLMLKDGFLYKRVSIGSVICWGV 357

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS  ELLKF+ + K  +E ++W+SSVY+ R KM+ +E AD +  +++GNGFNLHD VLF
Sbjct: 358  QPSDMELLKFSSVGKDGDEHLNWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHDFVLF 417

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G K FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+
Sbjct: 418  GHKAFGVIIAVEKDGFRILKGGVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTISINDT 477

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPK 11
            VKV +GPL+ ++G V+HMYKGTLFIYDEN+ ENSG FCAKS  CEN    K
Sbjct: 478  VKVLEGPLQDKQGIVKHMYKGTLFIYDENETENSGFFCAKSASCENMKESK 528


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  382 bits (981), Expect = e-118
 Identities = 180/293 (61%), Positives = 232/293 (79%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK 
Sbjct: 237  KSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKH 296

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGV
Sbjct: 297  AAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGV 356

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLF
Sbjct: 357  QPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLF 416

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND 
Sbjct: 417  GQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDI 476

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
            VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE     ++S
Sbjct: 477  VKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRES 529


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  382 bits (981), Expect = e-118
 Identities = 180/293 (61%), Positives = 232/293 (79%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK 
Sbjct: 237  KSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKH 296

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGV
Sbjct: 297  AAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGV 356

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLF
Sbjct: 357  QPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLF 416

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND 
Sbjct: 417  GQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDI 476

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
            VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE     ++S
Sbjct: 477  VKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRES 529


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  382 bits (981), Expect = e-118
 Identities = 180/293 (61%), Positives = 232/293 (79%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK 
Sbjct: 237  KSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKH 296

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGV
Sbjct: 297  AAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGV 356

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLF
Sbjct: 357  QPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLF 416

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND 
Sbjct: 417  GQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDI 476

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
            VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE     ++S
Sbjct: 477  VKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRES 529


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  382 bits (981), Expect = e-118
 Identities = 180/293 (61%), Positives = 232/293 (79%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK 
Sbjct: 237  KSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKH 296

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGV
Sbjct: 297  AAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGV 356

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLF
Sbjct: 357  QPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLF 416

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND 
Sbjct: 417  GQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDI 476

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
            VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE     ++S
Sbjct: 477  VKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRES 529


>gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  354 bits (908), Expect = e-117
 Identities = 172/306 (56%), Positives = 228/306 (74%), Gaps = 21/306 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTW+RMKNGNYKGDL QV++ D  RK+  IK++PR+DL AI+KK+GG VSLKE
Sbjct: 98   KPFEISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKE 157

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+
Sbjct: 158  AAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGI 217

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+    ++A  +D+ WLS +Y ++K              K+KSS+  D+KG
Sbjct: 218  QPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKG 277

Query: 391  AS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 227
            ++     +  + FNLHDLVL+GRK FGVII + KDG +ILKG   G  V T++ +DIK  
Sbjct: 278  STSTENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKG 336

Query: 226  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 47
            CVDKMFTA D H+KTI IND+V V +GP +G++G V+H+Y G LFI++E++ EN G FCA
Sbjct: 337  CVDKMFTAVDHHKKTISINDTVNVVEGPFQGKQGLVKHLYLGILFIFNESESENCGFFCA 396

Query: 46   KSDLCE 29
            +S  CE
Sbjct: 397  QSGSCE 402


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  374 bits (961), Expect = e-115
 Identities = 179/293 (61%), Positives = 230/293 (78%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK 
Sbjct: 237  KSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKH 296

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISS ELE     IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGV
Sbjct: 297  AAVPAPRLISSHELEPL---IETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGV 353

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLF 344
            QPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLF
Sbjct: 354  QPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLF 413

Query: 343  GRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDS 164
            G+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND 
Sbjct: 414  GQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDI 473

Query: 163  VKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKSDLCENSTPPKDS 5
            VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE     ++S
Sbjct: 474  VKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRES 526


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  357 bits (916), Expect = e-115
 Identities = 176/313 (56%), Positives = 230/313 (73%), Gaps = 19/313 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTWVRMKNGNYKGDL QV+  DD RKR  IK++PR+DL AI++KYGG +SLKE
Sbjct: 251  KPFEISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKIIPRVDLHAISRKYGGAISLKE 310

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIE++RDR TGE FE+LDGLM KDG+LYK+V+++S+++WG+
Sbjct: 311  AVVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGI 370

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+   +++A  +D+ W+SS+Y  +K              K KSS+ +    
Sbjct: 371  QPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKAST 430

Query: 391  ASE---QGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCV 221
            ++E     + FNLHDLVLFGRK FGVII + KDG++ILKG   G  V T+K +DIK  CV
Sbjct: 431  STENYDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCV 489

Query: 220  DKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKS 41
            DKMFTA DR +K I IND+V V +GP +G++G V+H+Y GTLFIY+E++ EN G FCA+ 
Sbjct: 490  DKMFTAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQC 549

Query: 40   DLCENSTPPKDSS 2
              CEN    K+SS
Sbjct: 550  GSCENVKKRKESS 562


>gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  348 bits (892), Expect = e-114
 Identities = 169/306 (55%), Positives = 226/306 (73%), Gaps = 21/306 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK 
Sbjct: 98   KPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKG 157

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+
Sbjct: 158  AAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGI 217

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K 
Sbjct: 218  QPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKA 277

Query: 391  AS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 227
            ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  
Sbjct: 278  STSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKG 336

Query: 226  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 47
            CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+Y G LFIY+E++ EN G FCA
Sbjct: 337  CVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCA 396

Query: 46   KSDLCE 29
            +S  CE
Sbjct: 397  QSGSCE 402


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  369 bits (947), Expect = e-113
 Identities = 187/309 (60%), Positives = 221/309 (71%), Gaps = 24/309 (7%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            K C I KG WVRMKNG YKGDL +V+  +DA+KR TIKLVPRIDLQAI+KK+GGG SLK 
Sbjct: 241  KACGIVKGMWVRMKNGKYKGDLAEVVLVNDAKKRVTIKLVPRIDLQAISKKFGGGTSLKA 300

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A +P PRLISS ELE FR HIE+RRDR TGE FE+LDGLMLKDGYLYKKVS+ S++ WGV
Sbjct: 301  AAIPAPRLISSHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSMGSLIHWGV 360

Query: 523  QPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSET--------------------- 407
            QP+ DEL+KF E+ K E +DV WLSS+Y AR K K  ET                     
Sbjct: 361  QPTSDELMKFEELDKDEVKDVDWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKSNPKV 420

Query: 406  ---ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDI 236
               ++ K A +Q NGF++ DLVLFG+K  G+IID   D  K+LKGD  G EV++I    I
Sbjct: 421  GEKSNQKDADKQINGFDIDDLVLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSINIRVI 480

Query: 235  KSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGL 56
            K  CVDK+FTA+DR  KTI I+D VKV +GPLEGREG VRHMYKG LFIYDE Q EN+G 
Sbjct: 481  KKICVDKVFTATDRCMKTISIDDVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSENNGF 540

Query: 55   FCAKSDLCE 29
            FCA S +C+
Sbjct: 541  FCANSGICD 549


>gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 748

 Score =  348 bits (892), Expect = e-111
 Identities = 169/306 (55%), Positives = 226/306 (73%), Gaps = 21/306 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK 
Sbjct: 247  KPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKG 306

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+
Sbjct: 307  AAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGI 366

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K 
Sbjct: 367  QPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKA 426

Query: 391  AS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 227
            ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  
Sbjct: 427  STSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKG 485

Query: 226  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 47
            CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+Y G LFIY+E++ EN G FCA
Sbjct: 486  CVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCA 545

Query: 46   KSDLCE 29
            +S  CE
Sbjct: 546  QSGSCE 551


>gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 925

 Score =  348 bits (892), Expect = e-109
 Identities = 169/306 (55%), Positives = 226/306 (73%), Gaps = 21/306 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK 
Sbjct: 98   KPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKG 157

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+
Sbjct: 158  AAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGI 217

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K 
Sbjct: 218  QPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKA 277

Query: 391  AS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 227
            ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  
Sbjct: 278  STSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKG 336

Query: 226  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 47
            CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+Y G LFIY+E++ EN G FCA
Sbjct: 337  CVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCA 396

Query: 46   KSDLCE 29
            +S  CE
Sbjct: 397  QSGSCE 402


>gb|AQK94722.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 967

 Score =  348 bits (892), Expect = e-109
 Identities = 169/306 (55%), Positives = 226/306 (73%), Gaps = 21/306 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK 
Sbjct: 98   KPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKG 157

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+
Sbjct: 158  AAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGI 217

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K 
Sbjct: 218  QPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKA 277

Query: 391  AS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 227
            ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  
Sbjct: 278  STSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKG 336

Query: 226  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 47
            CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+Y G LFIY+E++ EN G FCA
Sbjct: 337  CVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCA 396

Query: 46   KSDLCE 29
            +S  CE
Sbjct: 397  QSGSCE 402


>ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Setaria italica]
          Length = 1702

 Score =  357 bits (916), Expect = e-109
 Identities = 176/313 (56%), Positives = 230/313 (73%), Gaps = 19/313 (6%)
 Frame = -1

Query: 883  KPCTISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKE 704
            KP  IS+GTWVRMKNGNYKGDL QV+  DD RKR  IK++PR+DL AI++KYGG +SLKE
Sbjct: 251  KPFEISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKIIPRVDLHAISRKYGGAISLKE 310

Query: 703  AGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGV 524
            A VP PRLISSQELE FR HIE++RDR TGE FE+LDGLM KDG+LYK+V+++S+++WG+
Sbjct: 311  AVVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGI 370

Query: 523  QPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKG 392
            QP++ ELLKF+   +++A  +D+ W+SS+Y  +K              K KSS+ +    
Sbjct: 371  QPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKAST 430

Query: 391  ASE---QGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCV 221
            ++E     + FNLHDLVLFGRK FGVII + KDG++ILKG   G  V T+K +DIK  CV
Sbjct: 431  STENYDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCV 489

Query: 220  DKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAKS 41
            DKMFTA DR +K I IND+V V +GP +G++G V+H+Y GTLFIY+E++ EN G FCA+ 
Sbjct: 490  DKMFTAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQC 549

Query: 40   DLCENSTPPKDSS 2
              CEN    K+SS
Sbjct: 550  GSCENVKKRKESS 562